메뉴 건너뛰기




Volumn 81, Issue 6, 2010, Pages

Effect of crowding on the conformation of interwound DNA strands from neutron scattering measurements and Monte Carlo simulations

Author keywords

[No Author keywords available]

Indexed keywords

BASE PAIRS; CONCENTRATION OF; DNA CONCENTRATION; DNA SOLUTIONS; DNA STRANDS; FORM FACTORS; MANY-BODY PROBLEMS; MONTE CARLO; MONTE CARLO SIMULATION; NEUTRON SCATTERING MEASUREMENTS; SALINE SOLUTIONS; SCATTERING FUNCTIONS; SCATTERING INTENSITY; SINGLE DNA MOLECULES; SMALL ANGLE NEUTRON SCATTERING; SUPERCOILED DNA;

EID: 77953371403     PISSN: 15393755     EISSN: 15502376     Source Type: Journal    
DOI: 10.1103/PhysRevE.81.061905     Document Type: Article
Times cited : (15)

References (39)
  • 7
    • 0028049305 scopus 로고
    • The twist, writhe and overall shape of supercoiled DNA change during counterion-induced transition from a loosely to a tightly interwound superhelix. Possible implications for DNA structure in vivo
    • DOI 10.1006/jmbi.1994.1042
    • J. Bednar, P. Furrer, A. Stasiak, J. Dubochet, E. H. Egelman, and A. D. Bates, J. Mol. Biol. 235, 825 (1994). 10.1006/jmbi.1994.1042 (Pubitemid 24047826)
    • (1994) Journal of Molecular Biology , vol.235 , Issue.3 , pp. 825-847
    • Bednar, J.1    Furrer, P.2    Stasiak, A.3    Dubochet, J.4    Egelman, E.H.5    Bates, A.D.6
  • 14
    • 0001339660 scopus 로고
    • 10.1088/0034-4885/39/10/001
    • B. Jacrot, Rep. Prog. Phys. 39, 911 (1976). 10.1088/0034-4885/39/10/001
    • (1976) Rep. Prog. Phys. , vol.39 , pp. 911
    • Jacrot, B.1
  • 20
    • 1842582866 scopus 로고    scopus 로고
    • Thiophilic interaction chromatography for supercoiled plasmid DNA purification
    • DOI 10.1016/j.jbiotec.2003.10.036, PII S0168165604000380
    • L. M. Sandberg, A. Bjurling, P. Busson, J. Vasi, and R. Lemmens, J. Biotechnol. 109, 193 (2004). 10.1016/j.jbiotec.2003.10.036 (Pubitemid 38452584)
    • (2004) Journal of Biotechnology , vol.109 , Issue.1-2 , pp. 193-199
    • Sandberg, L.M.1    Bjurling, A.2    Busson, P.3    Vasi, J.4    Lemmens, R.5
  • 24
  • 26
    • 22944459180 scopus 로고    scopus 로고
    • Evaluating changes of writhe in computer simulations of supercoiled DNA
    • DOI 10.1063/1.1846052, 064905
    • R. de Vries, J. Chem. Phys. 122, 064905 (2005). 10.1063/1.1846052 (Pubitemid 41042292)
    • (2005) Journal of Chemical Physics , vol.122 , Issue.6 , pp. 1-5
    • De Vries, R.1
  • 27
    • 33845351506 scopus 로고    scopus 로고
    • Torsional rigidities of weakly strained DNAs
    • DOI 10.1529/biophysj.106.087593
    • B. S. Fujimoto, G. P. Brewood, and J. M. Schurr, Biophys. J. 91, 4166 (2006). 10.1529/biophysj.106.087593 (Pubitemid 44887275)
    • (2006) Biophysical Journal , vol.91 , Issue.11 , pp. 4166-4179
    • Fujimoto, B.S.1    Brewood, G.P.2    Schurr, J.M.3
  • 29
    • 0000406670 scopus 로고    scopus 로고
    • 10.1063/1.471966
    • T. Odijk, J. Chem. Phys. 105, 1270 (1996). 10.1063/1.471966
    • (1996) J. Chem. Phys. , vol.105 , pp. 1270
    • Odijk, T.1
  • 31
    • 33751575369 scopus 로고
    • 10.1021/ma00242a015
    • T. Odijk, Macromolecules 16, 1340 (1983). 10.1021/ma00242a015
    • (1983) Macromolecules , vol.16 , pp. 1340
    • Odijk, T.1
  • 33
    • 0030977220 scopus 로고    scopus 로고
    • The effect ionic conditions on the conformations of supercoiled DNA. I. Sedimentation analysis
    • DOI 10.1006/jmbi.1996.0876
    • V. V. Rybenkov, A. V. Vologodskii, and N. R. Cozzarelli, J. Mol. Biol. 267, 299 (1997). 10.1006/jmbi.1996.0876 (Pubitemid 27149842)
    • (1997) Journal of Molecular Biology , vol.267 , Issue.2 , pp. 299-311
    • Rybenkov, V.V.1    Vologodskii, A.V.2    Cozzarelli, N.R.3
  • 34
    • 0031588905 scopus 로고    scopus 로고
    • The effect of ionic conditions on the conformations of supercoiled DNA. II. Equilibrium catenation
    • DOI 10.1006/jmbi.1996.0877
    • V. V. Rybenkov, A. V. Vologodskii, and N. R. Cozzarelli, J. Mol. Biol. 267, 312 (1997). 10.1006/jmbi.1996.0877 (Pubitemid 27149843)
    • (1997) Journal of Molecular Biology , vol.267 , Issue.2 , pp. 312-323
    • Rybenkov, V.V.1    Vologodskii, A.V.2    Cozzarelli, N.R.3
  • 35
    • 0028237098 scopus 로고
    • Electrostatic effects in short superhelical DNA
    • DOI 10.1016/0301-4622(93)E0094-L
    • M. O. Fenley, W. K. Olson, I. Tobias, and G. S. Manning, Biophys. Chem. 50, 255 (1994). 10.1016/0301-4622(93)E0094-L (Pubitemid 24167289)
    • (1994) Biophysical Chemistry , vol.50 , Issue.3 , pp. 255-271
    • Fenley, M.O.1    Olson, W.K.2    Tobias, I.3    Manning, G.S.4
  • 36
    • 0027961109 scopus 로고
    • 10.1016/S0006-3495(94)80732-5
    • T. Schlick, B. Li, and W. K. Olson, Biophys. J. 67, 2146 (1994). 10.1016/S0006-3495(94)80732-5
    • (1994) Biophys. J. , vol.67 , pp. 2146
    • Schlick, T.1    Li, B.2    Olson, W.K.3
  • 39
    • 0033062960 scopus 로고    scopus 로고
    • 10.1016/S0006-3495(99)77405-9
    • J. Ubbink and T. Odijk, Biophys. J. 76, 2502 (1999). 10.1016/S0006- 3495(99)77405-9
    • (1999) Biophys. J. , vol.76 , pp. 2502
    • Ubbink, J.1    Odijk, T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.