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Volumn 173, Issue 1, 2010, Pages 63-75

Implementation of simple sequence repeat markers to genotype Florida strawberry varieties

Author keywords

Fingerprinting; Fragaria; Genotyping; Microsatellites; SSR markers; Strawberry

Indexed keywords

FRAGARIA; FRAGARIA X ANANASSA;

EID: 77953321548     PISSN: 00142336     EISSN: 15735060     Source Type: Journal    
DOI: 10.1007/s10681-009-0112-4     Document Type: Article
Times cited : (26)

References (41)
  • 1
    • 70349419548 scopus 로고    scopus 로고
    • SSR-based identification key of cultivar of Olea europaea L. diffused in Southern-Italy
    • Alba V, Montemurro C, Sabetta W, Pasqualone A, Blanco A (2009) SSR-based identification key of cultivar of Olea europaea L. diffused in Southern-Italy. Sci Hortic 123: 11-16.
    • (2009) Sci Hortic , vol.123 , pp. 11-16
    • Alba, V.1    Montemurro, C.2    Sabetta, W.3    Pasqualone, A.4    Blanco, A.5
  • 2
    • 0037275985 scopus 로고    scopus 로고
    • Fast and reliable strawberry cultivar identification using inter simple sequence repeat (ISSR) amplification
    • Arnau G, Lallemand J, Bourgoin M (2003) Fast and reliable strawberry cultivar identification using inter simple sequence repeat (ISSR) amplification. Euphytica 129: 69-79.
    • (2003) Euphytica , vol.129 , pp. 69-79
    • Arnau, G.1    Lallemand, J.2    Bourgoin, M.3
  • 4
    • 33646887380 scopus 로고    scopus 로고
    • Microsatellite markers for Fragaria from 'Strawberry Festival' expressed sequence tags
    • Bassil NV, Gunn M, Folta K, Lewers K (2006) Microsatellite markers for Fragaria from 'Strawberry Festival' expressed sequence tags. Mol Ecol Notes 6: 473-476.
    • (2006) Mol Ecol Notes , vol.6 , pp. 473-476
    • Bassil, N.V.1    Gunn, M.2    Folta, K.3    Lewers, K.4
  • 5
    • 0032806251 scopus 로고    scopus 로고
    • Sequence characterization of microsatellites in diploid and polyploid Ipomoea
    • Buteler MI, Jarret RL, LaBonte DR (1999) Sequence characterization of microsatellites in diploid and polyploid Ipomoea. Theor Appl Genet 99: 123-132.
    • (1999) Theor Appl Genet , vol.99 , pp. 123-132
    • Buteler, M.I.1    Jarret, R.L.2    Labonte, D.R.3
  • 6
    • 51249169259 scopus 로고
    • A simple and efficient method for isolating RNA from pine trees
    • Chang S, Puryear J, Cairney J (1993) A simple and efficient method for isolating RNA from pine trees. Plant Mol Biol Rep 11: 113-116.
    • (1993) Plant Mol Biol Rep , vol.11 , pp. 113-116
    • Chang, S.1    Puryear, J.2    Cairney, J.3
  • 7
    • 33746431765 scopus 로고    scopus 로고
    • A new set of microsatellite markers for Fragaria species and their application in linkage analysis
    • Cipriani G, Pinosa F, Bonoli M, Faedi W (2006) A new set of microsatellite markers for Fragaria species and their application in linkage analysis. J Hortic Sci Biotechnol 81: 668-675.
    • (2006) J Hortic Sci Biotechnol , vol.81 , pp. 668-675
    • Cipriani, G.1    Pinosa, F.2    Bonoli, M.3    Faedi, W.4
  • 8
    • 0023734473 scopus 로고
    • Novel non-templated nucleotide addition reactions catalyzed by procaryotic and eucaryotic DNA polymerases
    • Clark JM (1988) Novel non-templated nucleotide addition reactions catalyzed by procaryotic and eucaryotic DNA polymerases. Nucleic Acids Res 16: 9677-9686.
    • (1988) Nucleic Acids Res , vol.16 , pp. 9677-9686
    • Clark, J.M.1
  • 9
    • 0034144332 scopus 로고    scopus 로고
    • The use of random amplified polymorphic DNA (RAPD) markers to identify strawberry varieties: A forensic application
    • Congiu L, Chicca M, Cella R, Rossi R, Bernacchia G (2000) The use of random amplified polymorphic DNA (RAPD) markers to identify strawberry varieties: a forensic application. Mol Ecol 9: 229-232.
    • (2000) Mol Ecol , vol.9 , pp. 229-232
    • Congiu, L.1    Chicca, M.2    Cella, R.3    Rossi, R.4    Bernacchia, G.5
  • 10
    • 0001698571 scopus 로고
    • Few cytoplasms contribute to North-American strawberry cultivars
    • Dale A, Sjulin TM (1990) Few cytoplasms contribute to North-American strawberry cultivars. HortScience 25: 1341-1342.
    • (1990) HortScience , vol.25 , pp. 1341-1342
    • Dale, A.1    Sjulin, T.M.2
  • 11
    • 0034890901 scopus 로고    scopus 로고
    • Simple sequence repeat analysis of a clonally propagated species: A tool for managing a grape germplasm collection
    • Dangl GS, Mendum ML, Prins BH, Walker MA, Meredith CP, Simon CJ (2001) Simple sequence repeat analysis of a clonally propagated species: a tool for managing a grape germplasm collection. Genome 44: 432-438.
    • (2001) Genome , vol.44 , pp. 432-438
    • Dangl, G.S.1    Mendum, M.L.2    Prins, B.H.3    Walker, M.A.4    Meredith, C.P.5    Simon, C.J.6
  • 13
    • 77953325992 scopus 로고    scopus 로고
    • Dangl GS, Lee EW, Sims ST, Golino DA (2007) A new system for strawberry cultivar identification developed at Foundation Plant Services (FPS), University of California, Davis, using simple sequence repeat (SR) primers. In: NASS/NASGA proceedings, pp 118-121.
  • 14
    • 67349286543 scopus 로고    scopus 로고
    • A practical method for almond cultivar identification and parental analysis using simple sequence repeat markers
    • Dangl GS, Yang J, Golino D, Gradziel T (2009) A practical method for almond cultivar identification and parental analysis using simple sequence repeat markers. Euphytica 168: 41-48.
    • (2009) Euphytica , vol.168 , pp. 41-48
    • Dangl, G.S.1    Yang, J.2    Golino, D.3    Gradziel, T.4
  • 15
    • 0031903604 scopus 로고    scopus 로고
    • DNA fingerprinting of strawberry (Fragaria × ananassa) cultivars using randomly amplified polymorphic DNA (RAPD) markers
    • Degani C, Rowland L, Levi A, Hortynski J, Galletta G (1998) DNA fingerprinting of strawberry (Fragaria × ananassa) cultivars using randomly amplified polymorphic DNA (RAPD) markers. Euphytica 102: 247-253.
    • (1998) Euphytica , vol.102 , pp. 247-253
    • Degani, C.1    Rowland, L.2    Levi, A.3    Hortynski, J.4    Galletta, G.5
  • 16
    • 0027508951 scopus 로고
    • Artifactual variation in randomly amplified polymorphic DNA binding patterns
    • Ellsworth DL, Rittenhouse D, Honeycutt RL (1993) Artifactual variation in randomly amplified polymorphic DNA binding patterns. Biotechniques 14: 214-217.
    • (1993) Biotechniques , vol.14 , pp. 214-217
    • Ellsworth, D.L.1    Rittenhouse, D.2    Honeycutt, R.L.3
  • 17
    • 33748928824 scopus 로고    scopus 로고
    • Characterization of LF9, an octoploid strawberry genotype selected for rapid regeneration and transformation
    • Folta K, Dhingra A, Howard L, Stewart P, Chandler C (2006) Characterization of LF9, an octoploid strawberry genotype selected for rapid regeneration and transformation. Planta 224: 1058-1067.
    • (2006) Planta , vol.224 , pp. 1058-1067
    • Folta, K.1    Dhingra, A.2    Howard, L.3    Stewart, P.4    Chandler, C.5
  • 18
    • 0036189394 scopus 로고    scopus 로고
    • Morphological traits and high resolution RAPD markers for the identification of the main strawberry varieties cultivated in Argentina
    • Garcia MG, Ontivero M, Diaz Ricci JC, Castagnaro A (2002) Morphological traits and high resolution RAPD markers for the identification of the main strawberry varieties cultivated in Argentina. Plant Breed 121: 76-80.
    • (2002) Plant Breed , vol.121 , pp. 76-80
    • Garcia, M.G.1    Ontivero, M.2    Diaz Ricci, J.C.3    Castagnaro, A.4
  • 19
    • 0032870331 scopus 로고    scopus 로고
    • Horizontal gene transfer in glycosyl hydrolases inferred from codon usage in Escherichia coli and Bacillus subtilis
    • Garcia-Vallve S, Palau J, Romeu A (1999) Horizontal gene transfer in glycosyl hydrolases inferred from codon usage in Escherichia coli and Bacillus subtilis. Mol Biol Evol 16: 1125-1134.
    • (1999) Mol Biol Evol , vol.16 , pp. 1125-1134
    • Garcia-Vallve, S.1    Palau, J.2    Romeu, A.3
  • 20
    • 33751311304 scopus 로고    scopus 로고
    • EST-derived polymorphic microsatellites from cultivated strawberry (Fragaria × ananassa) are useful for diversity studies and varietal identification among Fragaria species
    • Gil-Ariza DJ, Amaya I, Botella MA, Munoz BJ, Caballero JL, Lopez-Aranda JM, Valpuesta V, Sanchez-Sevilla JF (2006) EST-derived polymorphic microsatellites from cultivated strawberry (Fragaria × ananassa) are useful for diversity studies and varietal identification among Fragaria species. Mol Ecol Notes 6: 1195-1197.
    • (2006) Mol Ecol Notes , vol.6 , pp. 1195-1197
    • Gil-Ariza, D.J.1    Amaya, I.2    Botella, M.A.3    Munoz, B.J.4    Caballero, J.L.5    Lopez-Aranda, J.M.6    Valpuesta, V.7    Sanchez-Sevilla, J.F.8
  • 21
    • 52449118243 scopus 로고    scopus 로고
    • A reliable multiplexed microsatellite set for genotyping Fragaria and its use in a survey of 60 F. × ananassa cultivars
    • Govan C, Simpson DW, Johnson AW, Tobutt KR, Sargent DJ (2008) A reliable multiplexed microsatellite set for genotyping Fragaria and its use in a survey of 60 F. × ananassa cultivars. Mol Breeding 22: 649-661.
    • (2008) Mol Breeding , vol.22 , pp. 649-661
    • Govan, C.1    Simpson, D.W.2    Johnson, A.W.3    Tobutt, K.R.4    Sargent, D.J.5
  • 22
    • 0029799396 scopus 로고    scopus 로고
    • A comparison of methods for the estimation of genetic diversity in strawberry cultivars
    • Graham J, McNicol RJ, McNicol JW (1996) A comparison of methods for the estimation of genetic diversity in strawberry cultivars. Theor Appl Genet 93: 402-406.
    • (1996) Theor Appl Genet , vol.93 , pp. 402-406
    • Graham, J.1    McNicol, R.J.2    McNicol, J.W.3
  • 24
    • 0038060807 scopus 로고    scopus 로고
    • Microsatellites in plants-a new class of molecular markers
    • Gupta PK, Balyan IS, Sharma PC, Ramesth B (1996) Microsatellites in plants-a new class of molecular markers. Curr Sci 70: 45-54.
    • (1996) Curr Sci , vol.70 , pp. 45-54
    • Gupta, P.K.1    Balyan, I.S.2    Sharma, P.C.3    Ramesth, B.4
  • 25
    • 0027975692 scopus 로고
    • Randomly amplified polymorphic DNAs in the cultivated strawberry, Fragaria × ananassa
    • Hancock JF, Callow PA, Shaw DV (1994) Randomly amplified polymorphic DNAs in the cultivated strawberry, Fragaria × ananassa. J Am Soc Hortic Sci 119: 862-864.
    • (1994) J Am Soc Hortic Sci , vol.119 , pp. 862-864
    • Hancock, J.F.1    Callow, P.A.2    Shaw, D.V.3
  • 26
    • 12344318625 scopus 로고    scopus 로고
    • Comparison of suitability of RAPD and ISSR techniques for determination of strawberry (Fragaria × ananassa Duch.) relationship
    • Kuras A, Korbin M, Zurawicz E (2004) Comparison of suitability of RAPD and ISSR techniques for determination of strawberry (Fragaria × ananassa Duch.) relationship. Plant Cell Tissue Organ Cult 79: 189-193.
    • (2004) Plant Cell Tissue Organ Cult , vol.79 , pp. 189-193
    • Kuras, A.1    Korbin, M.2    Zurawicz, E.3
  • 27
    • 12744280883 scopus 로고    scopus 로고
    • Strawberry genbank-derived and genomic simple sequence repeat (SSR) markers and their utility with strawberry, blackberry, and red and black raspberry
    • Lewers KS, Styan SMN, Hokanson SC, Bassil NV (2005) Strawberry genbank-derived and genomic simple sequence repeat (SSR) markers and their utility with strawberry, blackberry, and red and black raspberry. J Am Soc Hortic Sci 130: 102-115.
    • (2005) J Am Soc Hortic Sci , vol.130 , pp. 102-115
    • Lewers, K.S.1    Styan, S.M.N.2    Hokanson, S.C.3    Bassil, N.V.4
  • 29
    • 0027234059 scopus 로고
    • Variability of the random amplified polymorphic DNA assay among thermal cyclers, and effects of primer and DNA concentration
    • MacPherson JM, Eckstein PE, Scoles GJ, Gajadhar AA (1993) Variability of the random amplified polymorphic DNA assay among thermal cyclers, and effects of primer and DNA concentration. Mol Cell Probes 7: 293-299.
    • (1993) Mol Cell Probes , vol.7 , pp. 293-299
    • Macpherson, J.M.1    Eckstein, P.E.2    Scoles, G.J.3    Gajadhar, A.A.4
  • 30
    • 12544255569 scopus 로고    scopus 로고
    • Molecular characterisation of Sicilian Prunus persica cultivars using microsatellites
    • Marchese A, Tobutt KR, Caruso T (2005) Molecular characterisation of Sicilian Prunus persica cultivars using microsatellites. J Hortic Sci Biotechnol 80: 121-129.
    • (2005) J Hortic Sci Biotechnol , vol.80 , pp. 121-129
    • Marchese, A.1    Tobutt, K.R.2    Caruso, T.3
  • 32
    • 33644865720 scopus 로고    scopus 로고
    • A new set of polymorphic simple sequence repeat (SSR) markers from a wild strawberry (Fragaria vesca) are transferable to other diploid Fragaria species and to Fragaria × ananassa
    • Monfort A, Vilanova S, Davis TM, Arús P (2006) A new set of polymorphic simple sequence repeat (SSR) markers from a wild strawberry (Fragaria vesca) are transferable to other diploid Fragaria species and to Fragaria × ananassa. Mol Ecol Notes 6: 197-200.
    • (2006) Mol Ecol Notes , vol.6 , pp. 197-200
    • Monfort, A.1    Vilanova, S.2    Davis, T.M.3    Arús, P.4
  • 33
    • 0027357965 scopus 로고
    • PCR-amplified microsatellites as markers in plant genetics
    • Morgante M, Olivieri AM (1993) PCR-amplified microsatellites as markers in plant genetics. Plant J 3: 175-182.
    • (1993) Plant J , vol.3 , pp. 175-182
    • Morgante, M.1    Olivieri, A.M.2
  • 34
    • 0035154453 scopus 로고    scopus 로고
    • High-throughput SNP genotyping by allele-specific PCR with universal energy-transfer-labeled primers
    • Myakishev MV, Khripin Y, Hu S, Hamer DH (2001) High-throughput SNP genotyping by allele-specific PCR with universal energy-transfer-labeled primers. Genome Res 11: 163-169.
    • (2001) Genome Res , vol.11 , pp. 163-169
    • Myakishev, M.V.1    Khripin, Y.2    Hu, S.3    Hamer, D.H.4
  • 35
    • 0032189801 scopus 로고    scopus 로고
    • An evaluation of RAPD fragment reproducibility and nature
    • Perez T, Albornoz J, Dominguez A (1998) An evaluation of RAPD fragment reproducibility and nature. Mol Ecol 7: 1347-1357.
    • (1998) Mol Ecol , vol.7 , pp. 1347-1357
    • Perez, T.1    Albornoz, J.2    Dominguez, A.3
  • 36
    • 0032905971 scopus 로고    scopus 로고
    • Features of DNA fragments obtained by random amplified polymorphic DNA (RAPD) assays
    • Rabouam C, Comes AM, Bretagnolle V, Humbert J, Perique G, Bigot Y (1999) Features of DNA fragments obtained by random amplified polymorphic DNA (RAPD) assays. Mol Ecol 8: 493-503.
    • (1999) Mol Ecol , vol.8 , pp. 493-503
    • Rabouam, C.1    Comes, A.M.2    Bretagnolle, V.3    Humbert, J.4    Perique, G.5    Bigot, Y.6
  • 37
    • 0344668631 scopus 로고    scopus 로고
    • Development and characterization of polymorphic microsatellite markers from Fragaria viridis, a wild diploid strawberry
    • Sargent DJ, Hadonou AM, Simpson DW (2003) Development and characterization of polymorphic microsatellite markers from Fragaria viridis, a wild diploid strawberry. Mol Ecol Notes 3: 550-552.
    • (2003) Mol Ecol Notes , vol.3 , pp. 550-552
    • Sargent, D.J.1    Hadonou, A.M.2    Simpson, D.W.3
  • 39
    • 34249662102 scopus 로고    scopus 로고
    • Microsatellite markers are powerful tools for discriminating among olive cultivars and assigning them to geographically defined populations
    • Sarri V, Baldoni L, Porceddu A, Cultrera NGM, Frediani M, Belaj A, Trujillo I, Cionini PG (2006) Microsatellite markers are powerful tools for discriminating among olive cultivars and assigning them to geographically defined populations. Genome 49: 1606-1615.
    • (2006) Genome , vol.49 , pp. 1606-1615
    • Sarri, V.1    Baldoni, L.2    Porceddu, A.3    Cultrera, N.G.M.4    Frediani, M.5    Belaj, A.6    Trujillo, I.7    Cionini, P.G.8
  • 40
    • 73249142109 scopus 로고    scopus 로고
    • An inbred line of the diploid strawberry Fragaria vesca f. semperflorens for genomic and molecular genetic studies in the Rosaceae
    • Slovin JP, Schmitt K, Folta KM (2009) An inbred line of the diploid strawberry Fragaria vesca f. semperflorens for genomic and molecular genetic studies in the Rosaceae. BMC Plant Methods 5: 15.
    • (2009) BMC Plant Methods , vol.5 , pp. 15
    • Slovin, J.P.1    Schmitt, K.2    Folta, K.M.3
  • 41
    • 0036061736 scopus 로고    scopus 로고
    • Simplified AFLP procedure as a tool for identification of strawberry cultivars and advanced breeding lines
    • Tyrka M, Dziadczyk P, Hortyński J (2002) Simplified AFLP procedure as a tool for identification of strawberry cultivars and advanced breeding lines. Euphytica 125: 273-280.
    • (2002) Euphytica , vol.125 , pp. 273-280
    • Tyrka, M.1    Dziadczyk, P.2    Hortyński, J.3


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