Report from the killer immunoglobulin-like receptor (KIR) anthropology component of the 15th international histocompatibility workshop: Worldwide variation in the KIR loci and further evidence for the co-evolution of KIR and HLA

Tissue Antigens

Volumn 76, Issue 1, 2010, Pages 9-17

  Hollenbach, J A ^a   Meenagh, A ^b   Sleator, C ^b   Alaez, C ^c   Bengoche, M ^d   Canossi, A ^e   Contreras, G ^c   Creary, L ^f   Evseeva, I ^g   Gorodezky, C ^c   Hardie, R A ^h   Hemming Karlsen, T ⁱ   Lie, B ⁱ   Luo, M ^g   Martinetti, M ^j   Navarette, C ^f   De Oliveira, D C M ^k   Ozzella, G ^e   Pasi, A ^j   Pavlova, E ^l   Pinto, S ^m   Porto, L C ^k   Santos, P ^m   Slavcev, A ^l   Srinak, D ⁿ   Tavoularis, S ^o   Tonks, S ^p   Trachtenberg, E ^a   Vejbaesya, S ⁿ   Middleton, D ^q   more..

^a CHILDREN S HOSPITAL OAKLAND RESEARCH INSTITUTE   (United States)

^b Immunogenetics Laboratory   (Ireland)

^c Instituto Nacional de Diagnostico y Referencia Epidemiologicos   (Mexico)

^d Immunogenetics and Histocompatibility Laboratory   (Uruguay)

^e CNR   (Italy)

^f NHS BLOOD AND TRANSPLANT   (United Kingdom)

^g UNIVERSITY OF OXFORD   (United Kingdom)

^h UNIVERSITY OF MANITOBA   (Canada)

ⁱ OSLO UNIVERSITY HOSPITAL   (Norway)

^j FONDAZIONE IRCCS POLICLINICO SAN MATTEO   (Italy)

^k STATE UNIVERSITY OF RIO DE JANEIRO   (Brazil)

^l INSTITUTE FOR CLINICAL AND EXPERIMENTAL MEDICINE   (Czech Republic)

^m Functional Genomics Laboratory   (Portugal)

ⁿ MAHIDOL UNIVERSITY   (Thailand)

^o CANADIAN BLOOD SERVICES   (Canada)

^p UNIVERSITY OF OXFORD   (United Kingdom)

^q UNIVERSITY OF LIVERPOOL   (United Kingdom)

more..

Author keywords

15th International Histocompatibility Workshop; Anthropology; Killer immunoglobulin like receptor; Ligand

Indexed keywords

HLA C ANTIGEN; KILLER CELL IMMUNOGLOBULIN LIKE RECEPTOR 2DL1; KILLER CELL IMMUNOGLOBULIN LIKE RECEPTOR 2DL2; KILLER CELL IMMUNOGLOBULIN LIKE RECEPTOR 2DL3;

ALLELE; ANTHROPOLOGY; ARTICLE; GENE LOCUS; GENETIC VARIABILITY; GENOTYPE; HAPLOTYPE; HLA SYSTEM; HUMAN; POPULATION GENETIC PARAMETERS; PRIORITY JOURNAL;

EVOLUTION, MOLECULAR; GENETIC LOCI; GENETIC VARIATION; GENOTYPE; HLA ANTIGENS; HUMANS; POLYMORPHISM, GENETIC; RECEPTORS, KIR;

EID: 77953303308     PISSN: 00012815     EISSN: 13990039     Source Type: Journal    
DOI: 10.1111/j.1399-0039.2010.01459.x     Document Type: Article

References (32)

1. Uhrberg M, Parham P, Wernet P. Definition of gene content for nine common B haplotypes of the Caucasoid population: KIR haplotypes contain between seven and eleven KIR genes. Immunogenetics 2002 : 54 : 221 229.
2. Middleton D, Meenagh A, Gourraud PA. KIR haplotype content at the allele level in 77 Northern Irish families. Immunogenetics 2007 : 59 : 145 158.
3. Uhrberg M, Parham P, Wernet P. Definition of gene content for nine common group B haplotypes of the Caucasoid population: KIR haplotypes contain between seven and eleven KIR genes. Immunogenetics 2002 : 54 : 221 229.
4. Hsu KC, Chida S, Dupont B, Geraghty DE. The killer cell immunoglobulin-like receptor (KIR) genomic region: gene-order, haplotypes and allelic polymorphism. Immunol Rev 2002 : 190 : 40 52.
5. Snyder GA, Brooks AG, Sun PD. Crystal structure of the HLA-Cw3 allotype-specific killer cell inhibitory receptor KIR2DL2. Proc Natl Acad Sci U S A 1999 : 96 : 3864 3869.
6. Fan QR, Long EO, Wiley DC. Crystal structure of the human natural killer cell inhibitory receptor KIR2DL1-HLA-Cw4 complex. Nat Immunol 2001 : 2 : 452 460.
7. Maenaka K, Juji T, Stuart DI, Jones EY. Crystal structure of the human p58 killer cell inhibitory receptor (KIR2DL3) specific for HLA-Cw3-related MHC class I. Structure 1999 : 7 : 391 398.
8. Bottino C, Vitale M, Pende D, Biassoni R, Moretta A. Receptors for HLA class I molecules in human NK cells. Semin Immunol 1995 : 7 : 67 73.
9. Thananchai H, Gillespie G, Martin MP etal. Cutting edge: allele-specific and peptide-dependent Interactions between KIR3DL1 and HLA-A and HLA-B. J Immunol 2007 : 178 : 33 7.
10. Moffett A, Hiby SE. How does the maternal immune system contribute to the development of pre-eclampsia? Placenta 2007 : Suppl A: S51-6.
11. Trowsdale J, Parham P. Mini-review: defense strategies and immunity-related genes. Eur J Immunol 2004 : 34 : 7 17.
12. Trowsdale J. Genetic and functional relationships between MHC and NK receptor genes. Immunity 2001 : 15 : 363 374.
13. Vilches C, Parham P. KIR: Diverse, rapidly evolving receptors of innate and adaptive immunity. Annu Rev Immunol 2002 : 20 : 217 251.
14. Khakoo SI, Rajalingam R, Shum BP etal. Rapid evolution of NK cell receptor systems demonstrated by comparison of chimpanzees and humans. Immunity 2000 : 12 : 687 698.
15. Guethlein LA, Older Aguilar AM, Abi-Rached L, Parham P. Evolution of killer cell Ig-like receptor (KIR) genes: definition of an orangutan KIR haplotype reveals expansion of lineage III KIR associated with the emergence of MHC-C. J Immunol 2007 : 179 : 491 504.
16. Canavez F, Young NT, Guethlein LA etal. Comparison of chimpanzee and human leukocyte Ig-like receptor genes reveals framework and rapidly evolving genes. J Immunol 2001 : 167 : 5786 5794.
17. Single RM, Martin MP, Gao X etal. Global diversity and evidence for coevolution of KIR and HLA. Nat Genet 2007 : 39 : 1114 1119.
18. Hiby SE, Walker JJ, O'Shaughnessy KM etal. Combinations of maternal KIR and fetal HLA-C genes influence the risk of preeclampsia and reproductive success. J Exp Med 2004 : 200 : 957 965.
19. Meenagh A, Williams F, Sleator C, Halfpenny IA, Middleton D. Investigation of killer cell immunoglobulin-like receptor gene diversity V. KIR3DL2. Tissue Antigens 2004 : 64 : 226 234. (Pubitemid 39120447)
20. Halfpenny IA, Middleton D, Barnett YA, Williams F. Investigation of killer cell immunoglobulin-like receptor gene diversity: IV. KIR3DL1/S1. Hum Immunol 2004 : 65 : 602 612. (Pubitemid 38813411)
21. Lynch M, Milligan BG. Analysis of population genetic structure with RAPD markers. Mol Ecol 1994 : 3 : 91 9.
22. Peakall R, Smouse PE. GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 2006 : 6 : 288 295.
23. Yoo YJ, Tang J, Kaslow RA, Zhang K. Haplotype inference for present-absent genotype data using previously identified haplotypes and haplotype patterns. Bioinformatics 2007 : 23 : 2399 2406.
24. Nei M. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 1978 : 89 : 583 590.
25. Burchard EG, Ziv E, Coyle N etal. The importance of race and ethnic background in biomedical research and clinical practice. N Engl J Med 2003 : 348 : 1170 1175.
26. Single RM, Martin MP, Meyer D, Gao X, Carrington M. Methods for assessing gene content diversity of KIR with examples from a global set of populations. Immunogenetics 2008 : 60 : 711 725.
27. Single RM, Martin MP, Gao X etal. Global diversity and evidence for coevolution of KIR and HLA. Nat Genet 2007 : 39 : 1114 1119.
28. Norman PJ, Abi-Rached L, Gendzekhadze K etal. Unusual selection on the KIR3DL1/S1 natural killer cell receptor in Africans. Nat Genet 2007 : 39 : 1092 1099.
29. Norman PJ, Carrington CV, Byng M etal. Natural killer cell immunoglobulin-like receptor (KIR) locus profiles in African and South Asian populations. Genes Immun 2002 : 3 : 86 95.
30. Yawata M, Yawata N, Draghi M, Little AM, Partheniou F, Parham P. Roles for HLA and KIR polymorphisms in natural killer cell repertoire selection and modulation of effector function. J Exp Med 2006 : 203 : 633 645.
31. Norman PJ, Abi-Rached L, Gendzekhadze K etal. Unusual selection on the KIR3DL1/S1 natural killer cell receptor in Africans. Nat Genet 2007 : 39 : 1092 1099.
32. Ahlenstiel G, Martin MP, Gao X, Carrington M, Rehermann B. Distinct KIR/HLA compound genotypes affect the kinetics of human antiviral natural killer cell responses. J Clin Invest 2008 : 118 : 1017 1026.