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Volumn 37, Issue 4, 2010, Pages 2063-2073

Bacterial diversity in the rumen of Gayals (Bos frontalis), Swamp buffaloes (Bubalus bubalis) and Holstein cow as revealed by cloned 16S rRNA gene sequences

Author keywords

16S rRNA gene sequences; Bacterial diversity; Gayals; Holstein cow; Swamp buffaloes

Indexed keywords

DNA; RNA 16S;

EID: 77953165869     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-009-9664-6     Document Type: Article
Times cited : (47)

References (21)
  • 3
  • 4
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann RI, Ludwig W, Schleifer KH (1995) Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59:143-149
    • (1995) Microbiol Rev , vol.59 , pp. 143-149
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.H.3
  • 5
    • 0031816030 scopus 로고    scopus 로고
    • Phylogenetic analysis of rumen bacteria by comparative sequence analysis of cloned 16S rRNA genes
    • DOI 10.1006/anae.1998.0155
    • Whitford MF, Foster RJ, Beard CE, Gong J, Teather RM (1998) Phylogenetic analysis of rumen bacteria by comparative sequence analysis of cloned 16S rRNA genes. Anaerobe 4:153-163. doi: 10.1006/anae.1998.0155 (Pubitemid 28391036)
    • (1998) Anaerobe , vol.4 , Issue.3 , pp. 153-163
    • Whitford, M.F.1    Forster, R.J.2    Beard, C.E.3    Gong, J.4    Teather, R.M.5
  • 6
    • 44049102130 scopus 로고    scopus 로고
    • The use of molecular techniques based on ribosomal RNA and DNA for rumen microbial ecosystem studies: A review
    • DOI 10.1007/s11033-007-9079-1
    • Deng WD, Xi DM, Mao HM, Wanapat M (2008) The use of molecular techniques based on ribosomal RNA and DNA for rumen microbial ecosystem studies: A review. Mol Biol Rep 35:265-274. doi:10.1007/s11033-007-9079-1 (Pubitemid 351713258)
    • (2008) Molecular Biology Reports , vol.35 , Issue.2 , pp. 265-274
    • Deng, W.1    Xi, D.2    Mao, H.3    Wanapat, M.4
  • 7
  • 8
    • 19444363290 scopus 로고    scopus 로고
    • Prokaryote diversity in the rumen of yak (Bos grunniens) and Jinnan cattle (Bos taurus) estimated by 16S rDNA homology analyses
    • DOI 10.1016/j.anaerobe.2005.02.001, PII S1075996405000247
    • An D, Dong XZ, Dong ZY (2005) Prokaryote diversity in the rumen of yak (Bos grunniens) and Jinnan cattle (Bos taurus) estimated by 16S rDNA homology analyses. Anaerobe 4:207-215. doi:10.1016/j.anaerobe.2005.02.001 (Pubitemid 40724527)
    • (2005) Anaerobe , vol.11 , Issue.4 , pp. 207-215
    • An, D.1    Dong, X.2    Dong, Z.3
  • 9
    • 10944270397 scopus 로고    scopus 로고
    • Secretion patterns of growth hormone in growing captive mithuns (Bos frontalis)
    • doi:10.2108/ zsj.21.1125
    • Mondal M, Dhali A, Rajkhowa C, Rajkhowa C, Prakash BS (2004) Secretion patterns of growth hormone in growing captive mithuns (Bos frontalis). Zoolog Sci 21:1125-1129. doi:10.2108/ zsj.21.1125
    • (2004) Zoolog Sci , vol.21 , pp. 1125-1129
    • Mondal, M.1    Dhali, A.2    Rajkhowa, C.3    Rajkhowa, C.4    Prakash, B.S.5
  • 10
    • 34548583172 scopus 로고    scopus 로고
    • Comparison of Gayal (Bos frontalis) and Yunnan Yellow Cattle (Bos taurus): In vitro dry matter digestibility and gas production for a range of forages. Asian-Aust
    • Xi DM, Wanapat M, Deng WD, He TB, Yang ZF, Mao HM(2007) Comparison of Gayal (Bos frontalis) and Yunnan Yellow Cattle (Bos taurus): In vitro dry matter digestibility and gas production for a range of forages. Asian-Aust. J Anim Sci 20:1208-1214
    • (2007) J Anim Sci , vol.20 , pp. 1208-1214
    • Xi, D.M.1    Wanapat, M.2    Deng, W.D.3    He, T.B.4    Yang, Z.F.5    Mao, H.M.6
  • 11
    • 0024005650 scopus 로고
    • Use of phylogenetically based hybridization probes for studies in ruminal microbial ecology
    • Stahl DA, Flesher B, Mansfield HR, Montgomery L (1988) Use of phylogenetically based hybridization probes for studies in ruminal microbial ecology. Appl Environ Microbiol 154:1079-1084
    • (1988) Appl Environ Microbiol , vol.154 , pp. 1079-1084
    • Stahl, D.A.1    Flesher, B.2    Mansfield, H.R.3    Montgomery, L.4
  • 12
    • 77955710591 scopus 로고
    • Nucleic acid techniques in bacteria systematics
    • 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M (eds), New York
    • Lane DJ (1991) 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M (eds) Nucleic acid techniques in bacteria systematics. Wiley, New York
    • (1991) Wiley
    • Lane, D.J.1
  • 14
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • doi:10.1093/nar/22.22.4673
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680. doi:10.1093/nar/22.22.4673
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 15
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 16
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • DOI 10.1007/BF01731581
    • KimuraM(1980)Asimple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111-120. doi:10.1007/BF01731581 (Pubitemid 11166431)
    • (1980) Journal of Molecular Evolution , vol.16 , Issue.2 , pp. 111-120
    • Kimura, M.1
  • 17
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • doi:10.2307/2408678
    • Felsenstein J (1985) Confidence limits on phylogenies: An approach using the bootstrap. Evolution Int J Org Evolution 39:783-791. doi:10.2307/2408678
    • (1985) Evolution Int J Org Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 18
    • 0000803388 scopus 로고
    • The population frequencies of species and the estimation of population parameters
    • Good IL (1953) The population frequencies of species and the estimation of population parameters. Biometrika 40:237-264
    • (1953) Biometrika , vol.40 , pp. 237-264
    • Good, I.L.1
  • 19
    • 0024575680 scopus 로고
    • Ruminal cellulolytic bacteria and protozoa from bison, cattle-bison hybrids, and cattle fed three alfalfa-corn diets
    • Varel VH, Dehority BA (1989) Ruminal cellulolytic bacteria and protozoa from bison, cattle-bison hybrids, and cattle fed three alfalfa-corn diets. Appl Environ Microbiol 55:148-153
    • (1989) Appl Environ Microbiol , vol.55 , pp. 148-153
    • Varel, V.H.1    Dehority, B.A.2
  • 20
    • 0024933189 scopus 로고
    • A review of energy metabolism in producing ruminants
    • Part 1: Metabolism of energy substrates
    • Van der Walt JG, Linington MJ (1989) A review of energy metabolism in producing ruminants. Part 1: Metabolism of energy substrates. J S Afr Vet Assoc 60:223-227
    • (1989) J S Afr Vet Assoc , vol.60 , pp. 223-227
    • Van Der Walt, J.G.1    Linington, M.J.2
  • 21
    • 0017805722 scopus 로고
    • Adhesion of Bacteroides succinogenes in pure culture and in the presence of Ruminococcus flavefaciens to cell walls in leaves of perennial ryegrass (Lolium perenne)
    • Latham MJ, Brooker BE, Pettipher JL, Harris PJ (1978) Adhesion of Bacteroides succinogenes in pure culture and in the presence of Ruminococcus flavefaciens to cell walls in leaves of perennial ryegrass (Lolium perenne). Appl Environ Microbiol 35:1166-1173
    • (1978) Appl Environ Microbiol , vol.35 , pp. 1166-1173
    • Latham, M.J.1    Brooker, B.E.2    Pettipher, J.L.3    Harris, P.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.