-
1
-
-
0025226099
-
Occurrence, metabolism, metabolic role, and industrial uses of bacterial polyhydroxyalkanoates
-
Anderson, A.J., and Dawes, E.A. (1990) Occurrence, metabolism, metabolic role, and industrial uses of bacterial polyhydroxyalkanoates. Microbiol Rev 54: 450-472.
-
(1990)
Microbiol Rev
, vol.54
, pp. 450-472
-
-
Anderson, A.J.1
Dawes, E.A.2
-
3
-
-
0014804591
-
Microbial growth on oxalate by a route not involving glyoxylate carboligase
-
Blackmore, M.A., and Quayle, J.R. (1970) Microbial growth on oxalate by a route not involving glyoxylate carboligase. Biochem J 118: 53-59.
-
(1970)
Biochem J
, vol.118
, pp. 53-59
-
-
Blackmore, M.A.1
Quayle, J.R.2
-
4
-
-
67349283363
-
A reanalysis of phospholipid fatty acids as ecological biomarkers for methanotrophic bacteria
-
Bodelier, P.L.E., Bär Gillisen, M.-J., Hordijk, K., Sinninghe Damsté, J.S., Rijpstra, W.I.C., Geenevasen, J.A.J., and Dunfield, P.F. (2009) A reanalysis of phospholipid fatty acids as ecological biomarkers for methanotrophic bacteria. ISME J 3: 606-617.
-
(2009)
ISME J
, vol.3
, pp. 606-617
-
-
Bodelier, P.L.E.1
Bär Gillisen, M.-J.2
Hordijk, K.3
Sinninghe Damsté, J.S.4
Rijpstra, W.I.C.5
Geenevasen, J.A.J.6
Dunfield, P.F.7
-
5
-
-
0027374969
-
Revised taxonomy of the methanotrophs: description of Methylobacter gen. nov., emendation of Methylococcus, validation of Methylosinus and Methylocystis species and a proposal that the family Methylococcaceae includes only the group I methanotrophs
-
Bowman, J.P., Sly, L.I., Nichols, P.D., and Hayward, A.C. (1993) Revised taxonomy of the methanotrophs: description of Methylobacter gen. nov., emendation of Methylococcus, validation of Methylosinus and Methylocystis species and a proposal that the family Methylococcaceae includes only the group I methanotrophs. Int J Syst Bacteriol 43: 735-753.
-
(1993)
Int J Syst Bacteriol
, vol.43
, pp. 735-753
-
-
Bowman, J.P.1
Sly, L.I.2
Nichols, P.D.3
Hayward, A.C.4
-
6
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford, M.M. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248-254.
-
(1976)
Anal Biochem
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
7
-
-
1842362290
-
Complete nucleotide sequence of a 16S ribosomal RNA gene from E. coli
-
Brosius, J., Palmer, M.L., Kennedy, J.P., and Noller, H.F. (1987) Complete nucleotide sequence of a 16S ribosomal RNA gene from E. coli. Proc Natl Acad Sci USA 75: 4801-4805.
-
(1987)
Proc Natl Acad Sci USA
, vol.75
, pp. 4801-4805
-
-
Brosius, J.1
Palmer, M.L.2
Kennedy, J.P.3
Noller, H.F.4
-
8
-
-
0017758250
-
A rapid method for the base ratio determination of bacterial DNA
-
Cashion, P., Holder-Franklin, M.A., McCulli, J.M., and Franklin, M. (1977) A rapid method for the base ratio determination of bacterial DNA. Anal Biochem 81: 461-466.
-
(1977)
Anal Biochem
, vol.81
, pp. 461-466
-
-
Cashion, P.1
Holder-Franklin, M.A.2
McCulli, J.M.3
Franklin, M.4
-
9
-
-
0033938642
-
Denitrification with methane as electron donor in oxygen-limited bioreactors
-
Costa, C., Dijkema, C., Friedrich, M., Garcia-Encina, P., Fernandez-Polanco, F., and Stams, A.J.M. (2000) Denitrification with methane as electron donor in oxygen-limited bioreactors. Appl Microbiol Biotechnol 53: 754-762.
-
(2000)
Appl Microbiol Biotechnol
, vol.53
, pp. 754-762
-
-
Costa, C.1
Dijkema, C.2
Friedrich, M.3
Garcia-Encina, P.4
Fernandez-Polanco, F.5
Stams, A.J.M.6
-
10
-
-
0032746991
-
Molecular characterization of functional and phylogenetic genes form natural populations of methanotrophs in lake sediments
-
Costello, A.M., and Lidstrom, M.E. (1999) Molecular characterization of functional and phylogenetic genes form natural populations of methanotrophs in lake sediments. Appl Environ Microbiol 65: 5066-5074.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 5066-5074
-
-
Costello, A.M.1
Lidstrom, M.E.2
-
11
-
-
0015823869
-
The role and regulation of energy reserve polymers in micro-organisms
-
Dawes, E.A., and Senior, P.J. (1973) The role and regulation of energy reserve polymers in micro-organisms. Adv Microb Physiol 10: 135-266.
-
(1973)
Adv Microb Physiol
, vol.10
, pp. 135-266
-
-
Dawes, E.A.1
Senior, P.J.2
-
12
-
-
0014713693
-
The quantitative measurement of DNA hybridization from renaturation rates
-
De Ley, J., Cattoir, H., and Reynaerts, A. (1970) The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12: 133-142.
-
(1970)
Eur J Biochem
, vol.12
, pp. 133-142
-
-
De Ley, J.1
Cattoir, H.2
Reynaerts, A.3
-
13
-
-
0019037990
-
Thermal stability and renaturation of DNA in dimethylsulphoxide solutions: acceleration of renaturation rate
-
Escara, J.F., and Hutton, J.R. (1980) Thermal stability and renaturation of DNA in dimethylsulphoxide solutions: acceleration of renaturation rate. Biopolymers 19: 1315-1327.
-
(1980)
Biopolymers
, vol.19
, pp. 1315-1327
-
-
Escara, J.F.1
Hutton, J.R.2
-
14
-
-
52949103274
-
Denitrifying bacteria anaerobically oxidize methane in the absence of Archaea
-
Ettwig, K.F., Shima, S., van de Pas-Schoonen, K.T., Kahnt, J., Medema, M.H., op den Camp, H.J.M., et al. (2008) Denitrifying bacteria anaerobically oxidize methane in the absence of Archaea. Environ Microbiol 10: 3164-3173.
-
(2008)
Environ Microbiol
, vol.10
, pp. 3164-3173
-
-
Ettwig, K.F.1
Shima, S.2
van de Pas-Schoonen, K.T.3
Kahnt, J.4
Medema, M.H.5
op den Camp, H.J.M.6
-
15
-
-
0346770213
-
Taxonomy of obligate methylotrophs
-
Crawford, R.L., and Hanson, R.S. (eds). Washnigton, DC, USA: American Society for Microbiology
-
Galchenko, V.F., and Andreev, L.V. (1984) Taxonomy of obligate methylotrophs. In Microbial Growth on C1 Compounds. Crawford, R.L., and Hanson, R.S. (eds). Washnigton, DC, USA: American Society for Microbiology, pp. 269-281.
-
(1984)
Microbial Growth on C1 Compounds
, pp. 269-281
-
-
Galchenko, V.F.1
Andreev, L.V.2
-
16
-
-
0040748169
-
-
Puschino, USSR: Academy of Science, USSR
-
Galchenko, V.F., Andreev, L.V., and Trotsenko, YU.A. (1986) Taxonomy and Identification of Obligate Methanotrophic Bacteria (in Russian). Puschino, USSR: Academy of Science, USSR.
-
(1986)
Taxonomy and Identification of Obligate Methanotrophic Bacteria (in Russian)
-
-
Galchenko, V.F.1
Andreev, L.V.2
Trotsenko, Y.U.A.3
-
17
-
-
0001951565
-
Factors affecting competition between type I and type II methanotrophs in two-organism, continuousflow reactors
-
Graham, D.W., Chaudhary, J.A., Hanson, R.S., and Arnold, R.G. (1993) Factors affecting competition between type I and type II methanotrophs in two-organism, continuousflow reactors. Microb Ecol 25: 1-17.
-
(1993)
Microb Ecol
, vol.25
, pp. 1-17
-
-
Graham, D.W.1
Chaudhary, J.A.2
Hanson, R.S.3
Arnold, R.G.4
-
18
-
-
0000522843
-
Phospholipid, ester-linked fatty acid profiles as reproducible assays for changes in prokaryotic community structure of estuarine sediments
-
Guckert, J.B., Antworth, C.P., Nichols, P.D., and White, D.C. (1985) Phospholipid, ester-linked fatty acid profiles as reproducible assays for changes in prokaryotic community structure of estuarine sediments. FEMS Microbiol Ecol 31: 147-158.
-
(1985)
FEMS Microbiol Ecol
, vol.31
, pp. 147-158
-
-
Guckert, J.B.1
Antworth, C.P.2
Nichols, P.D.3
White, D.C.4
-
19
-
-
0030003012
-
Methanotrophic bacteria
-
Hanson, R.S., and Hanson, T.E. (1996) Methanotrophic bacteria. Microbiol Rev 60: 439-471.
-
(1996)
Microbiol Rev
, vol.60
, pp. 439-471
-
-
Hanson, R.S.1
Hanson, T.E.2
-
20
-
-
0020549589
-
Studies on the spectrometric determination of DNA hybridization from renaturation rates
-
Huss, V.A.R., Festl, H., and Schleifer, K.H. (1983) Studies on the spectrometric determination of DNA hybridization from renaturation rates. J Syst Appl Microbiol 4: 184-192.
-
(1983)
J Syst Appl Microbiol
, vol.4
, pp. 184-192
-
-
Huss, V.A.R.1
Festl, H.2
Schleifer, K.H.3
-
21
-
-
0003173066
-
Production of organic exometabolites by diverse cultures of obligate methanotrophs
-
Ivanova, T.I., and Nesterov, A.I. (1988) Production of organic exometabolites by diverse cultures of obligate methanotrophs. Sov Biotechnol 57: 486-491.
-
(1988)
Sov Biotechnol
, vol.57
, pp. 486-491
-
-
Ivanova, T.I.1
Nesterov, A.I.2
-
22
-
-
33144468700
-
The active methanotrophic community in hydromorphic soils changes in response to changing methane concentration
-
Knief, C., Kolb, S., Bodelier, P.L., Lipski, A., and Dunfield, P.F. (2006) The active methanotrophic community in hydromorphic soils changes in response to changing methane concentration. Environ Microbiol 8: 321-333.
-
(2006)
Environ Microbiol
, vol.8
, pp. 321-333
-
-
Knief, C.1
Kolb, S.2
Bodelier, P.L.3
Lipski, A.4
Dunfield, P.F.5
-
23
-
-
20444426890
-
Denitrifiers associated with methanotrophs and their potential impact on the nitrogen cycle
-
Knowles, R. (2005) Denitrifiers associated with methanotrophs and their potential impact on the nitrogen cycle. Ecol Eng 24: 441-446.
-
(2005)
Ecol Eng
, vol.24
, pp. 441-446
-
-
Knowles, R.1
-
24
-
-
0001857117
-
16S/23S rRNA sequencing
-
Stackebrandt, E., and Goodfellow, M. (eds). Chichester, UK: J Wiley & Sons
-
Lane, D.J. (1991) 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics. Stackebrandt, E., and Goodfellow, M. (eds). Chichester, UK: J Wiley & Sons, pp. 115-175.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
25
-
-
73049149853
-
Assay of poly-bhydroxybutyric acid
-
Law, J.H., and Slepecky, R.A. (1961) Assay of poly-bhydroxybutyric acid. J Bacteriol 82: 33-36.
-
(1961)
J Bacteriol
, vol.82
, pp. 33-36
-
-
Law, J.H.1
Slepecky, R.A.2
-
26
-
-
0019394757
-
Arthrobacter P1, a fast growing versatile methylotroph with amine oxidase as a key enzyme in the metabolism of methylated amines
-
Levering, P.R., van Dijken, J.P., Veenhuis, M., and Harder, W. (1981) Arthrobacter P1, a fast growing versatile methylotroph with amine oxidase as a key enzyme in the metabolism of methylated amines. Arch Microbiol 129: 72-80.
-
(1981)
Arch Microbiol
, vol.129
, pp. 72-80
-
-
Levering, P.R.1
van Dijken, J.P.2
Veenhuis, M.3
Harder, W.4
-
27
-
-
2542523843
-
ARB: a software environment for sequence data
-
Ludwig, W., Strunk, O., Westram, R., Richter, L., Meier, H., Yadhukumar, et al. (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32: 1363-1371.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
Richter, L.4
Yadhukumar, M.H.5
-
28
-
-
0031573009
-
The particulate monooxygenase gene pmoA and its use as a functional gene probe for methanotrophs
-
McDonald, I.R., and Murrell, J.C. (1997) The particulate monooxygenase gene pmoA and its use as a functional gene probe for methanotrophs. FEMS Microbiol Lett 156: 205-210.
-
(1997)
FEMS Microbiol Lett
, vol.156
, pp. 205-210
-
-
McDonald, I.R.1
Murrell, J.C.2
-
29
-
-
40549104438
-
Molecular ecology techniques for the study of aerobic methanotrophs
-
McDonald, I.R., Bodrossy, L., Chen, Y., and Murell, J.C. (2008) Molecular ecology techniques for the study of aerobic methanotrophs. Appl Environ Microbiol 74: 1305-1315.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 1305-1315
-
-
McDonald, I.R.1
Bodrossy, L.2
Chen, Y.3
Murell, J.C.4
-
30
-
-
0000198211
-
Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography
-
Mesbah, M., Premachandran, U., and Whitman, W. (1989) Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography. Int J Syst Bacteriol 39: 159-167.
-
(1989)
Int J Syst Bacteriol
, vol.39
, pp. 159-167
-
-
Mesbah, M.1
Premachandran, U.2
Whitman, W.3
-
31
-
-
34248650946
-
Denitrification with methane as external carbon source
-
Modin, O., Fukushi, K., and Yamamoto, K. (2007) Denitrification with methane as external carbon source. Water Res 41: 2726-2738.
-
(2007)
Water Res
, vol.41
, pp. 2726-2738
-
-
Modin, O.1
Fukushi, K.2
Yamamoto, K.3
-
32
-
-
33144475258
-
Differential effects of nitrogenous fertilizers on methane-consuming microbes in rice field and forest soils
-
Mohanty, S.R., Bodelier, P.L., Floris, V., and Conrad, R. (2006) Differential effects of nitrogenous fertilizers on methane-consuming microbes in rice field and forest soils. Appl Environ Microbiol 72: 1346-1354.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 1346-1354
-
-
Mohanty, S.R.1
Bodelier, P.L.2
Floris, V.3
Conrad, R.4
-
33
-
-
0008587413
-
Protein and polysaccharide composition during growth of Methylomonas methanica under chemostat conditions
-
Nesterov, A.I., Ivanova, T.I., Il'chenko, V.YA., Gayazov, R.R., and Mshenskii, YU.N. (1988) Protein and polysaccharide composition during growth of Methylomonas methanica under chemostat conditions. Sov Biotechnol 5: 18-22.
-
(1988)
Sov Biotechnol
, vol.5
, pp. 18-22
-
-
Nesterov, A.I.1
Ivanova, T.I.2
Il'chenko, V.Y.A.3
Gayazov, R.R.4
Mshenskii, Y.U.N.5
-
34
-
-
0016834933
-
Reduced nicotinamide adenine dinucleotide-activated phosphoenolpyruvate carboxylase in Pseudomonas MA: potential regulation between carbon assimilation and energy production
-
Newaz, S.S., and Hersh, L.B. (1975) Reduced nicotinamide adenine dinucleotide-activated phosphoenolpyruvate carboxylase in Pseudomonas MA: potential regulation between carbon assimilation and energy production. J Bacteriol 124: 825-833.
-
(1975)
J Bacteriol
, vol.124
, pp. 825-833
-
-
Newaz, S.S.1
Hersh, L.B.2
-
35
-
-
0022470933
-
Determination of monounsaturated fatty acid double band position and geometry for microbial monocultures and complex consortia by capillary GC-MS of their dimethyl disulfide adducts
-
Nichols, P.D., Guckert, J.B., and Whitte, D.C. (1986) Determination of monounsaturated fatty acid double band position and geometry for microbial monocultures and complex consortia by capillary GC-MS of their dimethyl disulfide adducts. J Microbiol Methods 5: 49-55.
-
(1986)
J Microbiol Methods
, vol.5
, pp. 49-55
-
-
Nichols, P.D.1
Guckert, J.B.2
Whitte, D.C.3
-
36
-
-
43149098323
-
Identification of the bacterial community involved in methane-dependent denitrification in activated sludge using DNA stable-isotope probing
-
Osaka, T., Ebie, Y., Tsuneda, S., and Inamory, Y. (2008) Identification of the bacterial community involved in methane-dependent denitrification in activated sludge using DNA stable-isotope probing. FEMS Microbiol Ecol 64: 494-506.
-
(2008)
FEMS Microbiol Ecol
, vol.64
, pp. 494-506
-
-
Osaka, T.1
Ebie, Y.2
Tsuneda, S.3
Inamory, Y.4
-
37
-
-
0023989064
-
Improved tools for biological sequence comparison
-
Pearson, W.R., and Lipman, D.J. (1988) Improved tools for biological sequence comparison. Proc Natl Acad Sci USA 85: 2444-2448.
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 2444-2448
-
-
Pearson, W.R.1
Lipman, D.J.2
-
38
-
-
33645876469
-
A microbial consortium couples anaerobic methane oxidation to denitrification
-
Raghoebarsing, A.A., Pol, A., van de Pas-Schoonen, K.T., Smolders, A.J.P., Ettwig, K.F., Rijpstra W.I.C., et al. (2006) A microbial consortium couples anaerobic methane oxidation to denitrification. Nature 440: 918-921.
-
(2006)
Nature
, vol.440
, pp. 918-921
-
-
Raghoebarsing, A.A.1
Pol, A.2
van de Pas-Schoonen, K.T.3
Smolders, A.J.P.4
Ettwig, K.F.5
Rijpstra, W.I.C.6
-
40
-
-
0028235537
-
Survival and recovery of methanotrophic bacteria starved under oxic and anoxic conditions
-
Roslev, P., and King, G.M. (1994) Survival and recovery of methanotrophic bacteria starved under oxic and anoxic conditions. Appl Environ Microbiol 60: 2602-2608.
-
(1994)
Appl Environ Microbiol
, vol.60
, pp. 2602-2608
-
-
Roslev, P.1
King, G.M.2
-
41
-
-
0028964521
-
Aerobic and anaerobic starvation metabolism in methanotrophic bacteria
-
Roslev, P., and King, G.M. (1995) Aerobic and anaerobic starvation metabolism in methanotrophic bacteria. Appl Environ Microbiol 61: 1563-1570.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 1563-1570
-
-
Roslev, P.1
King, G.M.2
-
42
-
-
0021058907
-
Occurrence of polyglucose as a storage polymer in Desulfovibrio species and Desulfobulbus propionicus
-
Stams, A.J.M., Veenhuis, M., Weenk, G.H., and Hansen, T.A. (1983) Occurrence of polyglucose as a storage polymer in Desulfovibrio species and Desulfobulbus propionicus. Arch Microbiol 136: 54-59.
-
(1983)
Arch Microbiol
, vol.136
, pp. 54-59
-
-
Stams, A.J.M.1
Veenhuis, M.2
Weenk, G.H.3
Hansen, T.A.4
-
43
-
-
0030617167
-
The use of methane as a sole carbon source for wastewater denitrification
-
Thalasso, F., Vallecillo, A., Garcia-Encina, P., and Fernandez-Polanco, F. (1997) The use of methane as a sole carbon source for wastewater denitrification. Water Res 31: 55-60.
-
(1997)
Water Res
, vol.31
, pp. 55-60
-
-
Thalasso, F.1
Vallecillo, A.2
Garcia-Encina, P.3
Fernandez-Polanco, F.4
-
44
-
-
0017199042
-
Acetone production by Methylobacteria
-
Thomson, A.W., O'Neill, J.G., and Wilkinson, J.F. (1976) Acetone production by Methylobacteria. Arch Microbiol 109: 243-246.
-
(1976)
Arch Microbiol
, vol.109
, pp. 243-246
-
-
Thomson, A.W.1
O'Neill, J.G.2
Wilkinson, J.F.3
-
46
-
-
15744384870
-
Methane-dependent denitrification by a semi-partitioned reactor supplied separately with methane and oxygen
-
Waki, M., Suzuki, K., Osada, T., and Tanaka, Y. (2005) Methane-dependent denitrification by a semi-partitioned reactor supplied separately with methane and oxygen. Bioresour Technol 96: 921-792.
-
(2005)
Bioresour Technol
, vol.96
, pp. 921-927
-
-
Waki, M.1
Suzuki, K.2
Osada, T.3
Tanaka, Y.4
-
47
-
-
0025920745
-
Denitrification with biogas as external carbon source
-
Werner, M., and Kayser, R. (1991) Denitrification with biogas as external carbon source. Water Sci Technol 23: 701-708.
-
(1991)
Water Sci Technol
, vol.23
, pp. 701-708
-
-
Werner, M.1
Kayser, R.2
-
48
-
-
33645384503
-
Determination of the sedimentary microbial biomass by extractable lipid phosphate
-
White, D.C., Davis, W.M., Nickels, J.S., King, J.D., and Bobbie, R.J. (1979) Determination of the sedimentary microbial biomass by extractable lipid phosphate. Oecologia 40: 51-62.
-
(1979)
Oecologia
, vol.40
, pp. 51-62
-
-
White, D.C.1
Davis, W.M.2
Nickels, J.S.3
King, J.D.4
Bobbie, R.J.5
-
49
-
-
0014793109
-
Enrichment, isolation and some properties of methaneutilizing bacteria
-
Whittenbury, R., Phillips, K.C., and Wilkinson, J.E. (1970) Enrichment, isolation and some properties of methaneutilizing bacteria. J Gen Microbiol 61: 205-218.
-
(1970)
J Gen Microbiol
, vol.61
, pp. 205-218
-
-
Whittenbury, R.1
Phillips, K.C.2
Wilkinson, J.E.3
-
50
-
-
0000713257
-
The isolation and estimation of the poly-β-hydroxybutyrate inclusions of Bacillus species
-
Williamson, D.H., and Wilkinson, J.F. (1958) The isolation and estimation of the poly-β-hydroxybutyrate inclusions of Bacillus species. J Gen Microbiol 19: 198-209.
-
(1958)
J Gen Microbiol
, vol.19
, pp. 198-209
-
-
Williamson, D.H.1
Wilkinson, J.F.2
|