-
1
-
-
0037336350
-
Integration from proteins to organs: the Physiome Project
-
Hunter P.J., and Borg T.K. Integration from proteins to organs: the Physiome Project. Nat. Rev. 4 (2003) 237-243
-
(2003)
Nat. Rev.
, vol.4
, pp. 237-243
-
-
Hunter, P.J.1
Borg, T.K.2
-
2
-
-
67650872917
-
Generation of histo-anatomically representative models of the individual heart: tools and applications
-
Plank G., Burton R.A.B., Hales P., Bishop M., Mansoori T., Bernabeu M.O., Garny A., Prassl A.J., Bollensdorff C., Mason F., Mahmood F., Rodriguez B., Grau V., Schneider J.E., Gavaghan D., and Kohl P. Generation of histo-anatomically representative models of the individual heart: tools and applications. Philos. Trans. R. Soc. A 367 (2009) 2257-2292
-
(2009)
Philos. Trans. R. Soc. A
, vol.367
, pp. 2257-2292
-
-
Plank, G.1
Burton, R.A.B.2
Hales, P.3
Bishop, M.4
Mansoori, T.5
Bernabeu, M.O.6
Garny, A.7
Prassl, A.J.8
Bollensdorff, C.9
Mason, F.10
Mahmood, F.11
Rodriguez, B.12
Grau, V.13
Schneider, J.E.14
Gavaghan, D.15
Kohl, P.16
-
3
-
-
70350588995
-
Chaste: a test-driven approach to software development for biological modelling
-
Pitt-Francis J., Pathmanathan P., Bernabeu M.O., Bordas R., Cooper J., Fletcher A.G., Mirams G.R., Murray P., Osborne J.M., Walter A., Chapman S.J., Garny A., van Leeuwen I.M.M., Maini P.K., Rodriguez B., Waters S.L., Whiteley J.P., Byrne H.M., and Gavaghan D.J. Chaste: a test-driven approach to software development for biological modelling. Comp. Phys. Commun. 180 (2009) 2452-2471
-
(2009)
Comp. Phys. Commun.
, vol.180
, pp. 2452-2471
-
-
Pitt-Francis, J.1
Pathmanathan, P.2
Bernabeu, M.O.3
Bordas, R.4
Cooper, J.5
Fletcher, A.G.6
Mirams, G.R.7
Murray, P.8
Osborne, J.M.9
Walter, A.10
Chapman, S.J.11
Garny, A.12
van Leeuwen, I.M.M.13
Maini, P.K.14
Rodriguez, B.15
Waters, S.L.16
Whiteley, J.P.17
Byrne, H.M.18
Gavaghan, D.J.19
-
5
-
-
0025891531
-
A model of the ventricular cardiac action potential. Depolarization, repolarization, and their interaction
-
Luo C., and Rudy Y. A model of the ventricular cardiac action potential. Depolarization, repolarization, and their interaction. Circ. Res. 68 (1991) 1501-1526
-
(1991)
Circ. Res.
, vol.68
, pp. 1501-1526
-
-
Luo, C.1
Rudy, Y.2
-
6
-
-
0031105550
-
A finite volume model of cardiac propagation
-
Harrild D.M., and Henriquez C.S. A finite volume model of cardiac propagation. Ann. Biomed. Eng. 25 (1997) 315-334
-
(1997)
Ann. Biomed. Eng.
, vol.25
, pp. 315-334
-
-
Harrild, D.M.1
Henriquez, C.S.2
-
7
-
-
0003963931
-
A numerical method for the solution of the bidomain equations in cardiac tissue
-
Keener J.P., and Bogar K. A numerical method for the solution of the bidomain equations in cardiac tissue. Chaos 8 (1998) 234-241
-
(1998)
Chaos
, vol.8
, pp. 234-241
-
-
Keener, J.P.1
Bogar, K.2
-
8
-
-
0036846263
-
Computational techniques for solving the bidomain equations in three dimensions
-
Vigmond E.J., Aguel F., and Trayanova N.A. Computational techniques for solving the bidomain equations in three dimensions. IEEE Trans. Biomed. Eng. 49 (2002) 1260-1269
-
(2002)
IEEE Trans. Biomed. Eng.
, vol.49
, pp. 1260-1269
-
-
Vigmond, E.J.1
Aguel, F.2
Trayanova, N.A.3
-
9
-
-
0347359247
-
Computational tools for modeling electrical activation in cardiac tissues
-
Vigmond E., Hughes M., Plank G., and Leon L. Computational tools for modeling electrical activation in cardiac tissues. J. Electrocardiol. 36 Suppl. (2003) 69-74
-
(2003)
J. Electrocardiol.
, vol.36
, Issue.SUPPL
, pp. 69-74
-
-
Vigmond, E.1
Hughes, M.2
Plank, G.3
Leon, L.4
-
10
-
-
21244433958
-
A finite volume method for modeling discontinuous electrical activation in cardiac tissue
-
Trew M.L., LeGrice I., Smaill B.H., and Pullan A. A finite volume method for modeling discontinuous electrical activation in cardiac tissue. Ann. Biomed. Eng. 33 (2005 a) 590-602
-
(2005)
Ann. Biomed. Eng.
, vol.33
, pp. 590-602
-
-
Trew, M.L.1
LeGrice, I.2
Smaill, B.H.3
Pullan, A.4
-
11
-
-
28244493589
-
A generalized finite difference method for modeling cardiac electrical activation on arbitrary, irregular computational meshes
-
Trew M.L., Smaill B.H., Bullivant D.P., Hunter P.J., and Pullan A.J. A generalized finite difference method for modeling cardiac electrical activation on arbitrary, irregular computational meshes. Math. Biosci. 198 (2005 b) 169-189
-
(2005)
Math. Biosci.
, vol.198
, pp. 169-189
-
-
Trew, M.L.1
Smaill, B.H.2
Bullivant, D.P.3
Hunter, P.J.4
Pullan, A.J.5
-
12
-
-
43049141917
-
Solvers for the cardiac bidomain equations
-
Vigmond E.J., Weber dos Santos R., Prassl A.J., Deo M., and Plank G. Solvers for the cardiac bidomain equations. Prog. Biophys. Mol. Biol. 96 (2007) 3-18
-
(2007)
Prog. Biophys. Mol. Biol.
, vol.96
, pp. 3-18
-
-
Vigmond, E.J.1
Weber dos Santos, R.2
Prassl, A.J.3
Deo, M.4
Plank, G.5
-
13
-
-
48349125992
-
Chaste: using agile programming techniques to develop computational biology software
-
Pitt-Francis J., Bernabeu M.O., Cooper J., Garny A., Momtahan L., Osborne J., Pathmanathan P., Rodriguez B., Whiteley J.P., and Gavaghan D.J. Chaste: using agile programming techniques to develop computational biology software. Philos. Trans. R. Soc. A 366 (2008) 3111-3136
-
(2008)
Philos. Trans. R. Soc. A
, vol.366
, pp. 3111-3136
-
-
Pitt-Francis, J.1
Bernabeu, M.O.2
Cooper, J.3
Garny, A.4
Momtahan, L.5
Osborne, J.6
Pathmanathan, P.7
Rodriguez, B.8
Whiteley, J.P.9
Gavaghan, D.J.10
-
14
-
-
84857040838
-
-
Argonne National Laboratory
-
Balay S., Buschelman K., Eijkhout V., Gropp W.D., Kaushik D., Knepley M., McInnes L.C., Smith B.F., and Zhang H. PETSc Users Manual, Technical Report ANL-95/11 - Revision 2.3.2 (2006), Argonne National Laboratory
-
(2006)
PETSc Users Manual, Technical Report ANL-95/11 - Revision 2.3.2
-
-
Balay, S.1
Buschelman, K.2
Eijkhout, V.3
Gropp, W.D.4
Kaushik, D.5
Knepley, M.6
McInnes, L.C.7
Smith, B.F.8
Zhang, H.9
-
15
-
-
17544388260
-
A space-time adaptive method for simulating complex cardiac dynamics
-
Cherry E.M., Greenside H.S., and Henriquez C.S. A space-time adaptive method for simulating complex cardiac dynamics. Phys. Rev. Lett. 84 (2000) 1343-1346
-
(2000)
Phys. Rev. Lett.
, vol.84
, pp. 1343-1346
-
-
Cherry, E.M.1
Greenside, H.S.2
Henriquez, C.S.3
-
16
-
-
0141678056
-
Efficient simulation of three-dimensional anisotropic cardiac tissue using an adaptive mesh refinement method
-
Cherry E.M., Greenside H.S., and Henriquez C.S. Efficient simulation of three-dimensional anisotropic cardiac tissue using an adaptive mesh refinement method. Chaos 13 (2003) 853
-
(2003)
Chaos
, vol.13
, pp. 853
-
-
Cherry, E.M.1
Greenside, H.S.2
Henriquez, C.S.3
-
17
-
-
2442572165
-
Operator splitting and adaptive mesh refinement for the Luo-Rudy I model
-
Trangenstein J.A., and Kim C. Operator splitting and adaptive mesh refinement for the Luo-Rudy I model. J. Comp. Phys. 196 (2004) 645-679
-
(2004)
J. Comp. Phys.
, vol.196
, pp. 645-679
-
-
Trangenstein, J.A.1
Kim, C.2
-
18
-
-
35248866317
-
Physiology driven adaptivity for the numerical solution of the bidomain equations
-
Whiteley J.P. Physiology driven adaptivity for the numerical solution of the bidomain equations. Ann. Biomed. Eng. 35 (2007) 1510-1520
-
(2007)
Ann. Biomed. Eng.
, vol.35
, pp. 1510-1520
-
-
Whiteley, J.P.1
-
19
-
-
34249063270
-
Adaptivity in space and time for reaction-diffusion systems in electrocardiology
-
Colli Franzone P., Deuflhard P., Erdmann B., Lang J., and Pavarino L.F. Adaptivity in space and time for reaction-diffusion systems in electrocardiology. SIAM J. Sci. Comput. 28 (2006) 942-962
-
(2006)
SIAM J. Sci. Comput.
, vol.28
, pp. 942-962
-
-
Colli Franzone, P.1
Deuflhard, P.2
Erdmann, B.3
Lang, J.4
Pavarino, L.F.5
-
20
-
-
67349240420
-
Adaptive finite element simulation of ventricular fibrillation dynamics
-
Deuflhard P., Erdmann B., Roitzsch R., and Lines G.T. Adaptive finite element simulation of ventricular fibrillation dynamics. Comput. Vis. Sci. 12 (2009) 201-205
-
(2009)
Comput. Vis. Sci.
, vol.12
, pp. 201-205
-
-
Deuflhard, P.1
Erdmann, B.2
Roitzsch, R.3
Lines, G.T.4
-
21
-
-
77953087145
-
On efficiency and accuracy in cardioelectric simulation, Technical Report, Konrad-Zuse-Zentrum fur Informationstechnik Berlin, Berlin, Germany
-
08-41
-
M. Weiser, B. Erdmann, P. Deuflhard, On efficiency and accuracy in cardioelectric simulation, Technical Report, Konrad-Zuse-Zentrum fur Informationstechnik Berlin, Berlin, Germany, 2008, ZIB-Report 08-41.
-
(2008)
ZIB-Report
-
-
Weiser, M.1
Erdmann, B.2
Deuflhard, P.3
-
22
-
-
38349002708
-
A time-dependent adaptive remeshing for electrical waves of the heart
-
Belhamadia Y. A time-dependent adaptive remeshing for electrical waves of the heart. IEEE Trans. Biomed. Eng. 55 (2008) 443-452
-
(2008)
IEEE Trans. Biomed. Eng.
, vol.55
, pp. 443-452
-
-
Belhamadia, Y.1
-
24
-
-
77953086099
-
Interpolation between discontinuous volume meshes by local Galerkin projection
-
(in review)
-
Farrell P.E., and Maddison J.R. Interpolation between discontinuous volume meshes by local Galerkin projection. Comput. Methods Appl. Mech. Eng. (2009) (in review)
-
(2009)
Comput. Methods Appl. Mech. Eng.
-
-
Farrell, P.E.1
Maddison, J.R.2
-
25
-
-
67650676756
-
Towards accurate numerical methods for monodomain models using a realistic heart geometry
-
Belhamadia Y., Fortin A., and Bourgault Y. Towards accurate numerical methods for monodomain models using a realistic heart geometry. Math. Biosci. 220 (2009) 89-101
-
(2009)
Math. Biosci.
, vol.220
, pp. 89-101
-
-
Belhamadia, Y.1
Fortin, A.2
Bourgault, Y.3
-
26
-
-
0004540986
-
Tetrahedral mesh optimisation and adaptivity for steady-state and transient finite element calculations
-
Pain C., Umpleby A., de Oliveira C., and Goddard A. Tetrahedral mesh optimisation and adaptivity for steady-state and transient finite element calculations. Comput. Methods Appl. Mech. Eng. 190 (2001) 3771-3796
-
(2001)
Comput. Methods Appl. Mech. Eng.
, vol.190
, pp. 3771-3796
-
-
Pain, C.1
Umpleby, A.2
de Oliveira, C.3
Goddard, A.4
-
27
-
-
0000028545
-
Anisotropic mesh transformations and optimal error control
-
Simpson R.B. Anisotropic mesh transformations and optimal error control. Appl. Numer. Math. 14 (1994) 183-198
-
(1994)
Appl. Numer. Math.
, vol.14
, pp. 183-198
-
-
Simpson, R.B.1
-
28
-
-
0031274209
-
Anisotropic mesh optimization and its applications in adaptivity
-
Buscaglia G.C., and Dari E.A. Anisotropic mesh optimization and its applications in adaptivity. Int. J. Numer. Methods Eng. 40 (1997) 4119-4136
-
(1997)
Int. J. Numer. Methods Eng.
, vol.40
, pp. 4119-4136
-
-
Buscaglia, G.C.1
Dari, E.A.2
-
29
-
-
14744293358
-
h, r, and hr adaptivity with applications in numerical ocean modelling
-
Piggott M.D., Pain C.C., Gorman G.J., Power P.W., and Goddard A.J.H. h, r, and hr adaptivity with applications in numerical ocean modelling. Ocean Model. 10 (2005) 95-113
-
(2005)
Ocean Model.
, vol.10
, pp. 95-113
-
-
Piggott, M.D.1
Pain, C.C.2
Gorman, G.J.3
Power, P.W.4
Goddard, A.J.H.5
-
30
-
-
33746725878
-
Adjoint goal-based error norms for adaptive mesh ocean modelling
-
Power P.W., Pain C.C., Piggott M.D., Gorman G.J., Marshall D.P., Goddard A.J.H., and Navon I.M. Adjoint goal-based error norms for adaptive mesh ocean modelling. Ocean Model. 15 (2006) 3-38
-
(2006)
Ocean Model.
, vol.15
, pp. 3-38
-
-
Power, P.W.1
Pain, C.C.2
Piggott, M.D.3
Gorman, G.J.4
Marshall, D.P.5
Goddard, A.J.H.6
Navon, I.M.7
-
32
-
-
24044543275
-
Anisotropic mesh adaptation for CFD computations
-
Frey P.J., and Alauzet F. Anisotropic mesh adaptation for CFD computations. Comput. Methods Appl. Mech. Eng. 194 (2005) 5068-5082
-
(2005)
Comput. Methods Appl. Mech. Eng.
, vol.194
, pp. 5068-5082
-
-
Frey, P.J.1
Alauzet, F.2
-
34
-
-
0003782327
-
Delaunay triangulation and meshing: application to finite elements
-
George P.L., and Borouchaki H. Delaunay triangulation and meshing: application to finite elements. Hermes (1998)
-
(1998)
Hermes
-
-
George, P.L.1
Borouchaki, H.2
|