-
1
-
-
0034069495
-
Gene ontology: Tool for the unification of biology. The Gene Ontology Consortium
-
Ashburner, M., Ball, C. A., Blake, J. A., Botstein, D., Butler, H., Cherry, J. M., Davis, A. P., Dolinski, K., Dwight, S. S., Eppig, J. T., Harris, M. A., Hill, D. P., Issel-Tarver, L., Kasarskis, A., Lewis, S., Matese, J. C., Richardson, J. E., Ringwald, M., Rubin, G. M., and Sherlock, G. (2000). Gene ontology: Tool for the unification of biology. The Gene Ontology Consortium. Nature Genetics 25, 25 29.
-
(2000)
Nature Genetics
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
Harris, M.A.11
Hill, D.P.12
Issel-Tarver, L.13
Kasarskis, A.14
Lewis, S.15
Matese, J.C.16
Richardson, J.E.17
Ringwald, M.18
Rubin, G.M.19
Sherlock, G.20
more..
-
2
-
-
39849102639
-
Simultaneous regression shrinkage, variable selection, and supervised clustering of predictors with OSCAR
-
Bondell, H. D. and Reich, B. J. (2008). Simultaneous regression shrinkage, variable selection, and supervised clustering of predictors with OSCAR. Biometrics 64, 115 123.
-
(2008)
Biometrics
, vol.64
, pp. 115-123
-
-
Bondell, H.D.1
Reich, B.J.2
-
3
-
-
0038615946
-
Analysis of the phosphatidylinositol 3′-kinase signaling pathway in glioblastoma patients in vivo
-
Choe, G., Horvath, S., Cloughesy, T. F., Crosby, K., Seligson, D., Palotie, A., Inge, L., Smith, B. L., Sawyers, C. L., and Mischel, P. S. (2003). Analysis of the phosphatidylinositol 3′-kinase signaling pathway in glioblastoma patients in vivo. Cancer Research 63, 2742 2746.
-
(2003)
Cancer Research
, vol.63
, pp. 2742-2746
-
-
Choe, G.1
Horvath, S.2
Cloughesy, T.F.3
Crosby, K.4
Seligson, D.5
Palotie, A.6
Inge, L.7
Smith, B.L.8
Sawyers, C.L.9
Mischel, P.S.10
-
4
-
-
3242708140
-
Least angle regression
-
Efron, B., Hastie, T., Johnstone, I., and Tibshirani, R. (2004). Least angle regression. Annals of Statistics 32, 407 499.
-
(2004)
Annals of Statistics
, vol.32
, pp. 407-499
-
-
Efron, B.1
Hastie, T.2
Johnstone, I.3
Tibshirani, R.4
-
5
-
-
1542784498
-
Variable selection via nonconcave penalized likelihood and its oracle properties
-
Fan, J. and Li, R. (2001). Variable selection via nonconcave penalized likelihood and its oracle properties. Journal of the American Statistical Association 96, 1348 1360.
-
(2001)
Journal of the American Statistical Association
, vol.96
, pp. 1348-1360
-
-
Fan, J.1
Li, R.2
-
6
-
-
31444451841
-
Cosmic 2005
-
Forbes, S., Clements, J., Dawson, E., Bamford, S., Webb, T., Dogan, A., Flanagan, A., Teague, J., Wooster, R., Futreal, P. A., and Stratton, M. R. (2006). Cosmic 2005. British Journal of Cancer 94, 318 322.
-
(2006)
British Journal of Cancer
, vol.94
, pp. 318-322
-
-
Forbes, S.1
Clements, J.2
Dawson, E.3
Bamford, S.4
Webb, T.5
Dogan, A.6
Flanagan, A.7
Teague, J.8
Wooster, R.9
Futreal, P.A.10
Stratton, M.R.11
-
7
-
-
0141767040
-
Proper multivariate conditional autoregressive models for spatial data analysis
-
Gelfand, A. E. and Vounatsou, P. (2003). Proper multivariate conditional autoregressive models for spatial data analysis. Biostatistics 4, 11 25.
-
(2003)
Biostatistics
, vol.4
, pp. 11-25
-
-
Gelfand, A.E.1
Vounatsou, P.2
-
8
-
-
84942484786
-
Ridge regression: Biased estimation for nonorthogonal problems
-
Hoerl, A. E. and Kennard, R. W. (1970). Ridge regression: Biased estimation for nonorthogonal problems. Technometrics 12, 55 67.
-
(1970)
Technometrics
, vol.12
, pp. 55-67
-
-
Hoerl, A.E.1
Kennard, R.W.2
-
9
-
-
33751208636
-
Analysis of oncogenic signaling networks in glioblastoma identifies ASPM as a molecular target
-
Horvath, S., Zhang, B., Carlson, et al (2006). Analysis of oncogenic signaling networks in glioblastoma identifies ASPM as a molecular target. Proceedings of the National Academy of Sciences USA 103, 17402 17407.
-
(2006)
Proceedings of the National Academy of Sciences USA
, vol.103
, pp. 17402-17407
-
-
Horvath, S.1
Zhang, B.2
Carlson3
-
10
-
-
0142121516
-
Exploration, normalization, and summaries of high density oligonucleotide array probe level data
-
Irizarry, R. A., Hobbs, B., Collin, F., Beazer-Barclay, Y. D., Antonellis, K. J., Scherf, U., and Speed, T. P. (2003). Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4, 249 264.
-
(2003)
Biostatistics
, vol.4
, pp. 249-264
-
-
Irizarry, R.A.1
Hobbs, B.2
Collin, F.3
Beazer-Barclay, Y.D.4
Antonellis, K.J.5
Scherf, U.6
Speed, T.P.7
-
11
-
-
0033982936
-
KEGG: Kyoto encyclopedia of genes and genomes
-
Kanehisa, M. and Goto, S. (2000). KEGG: Kyoto encyclopedia of genes and genomes. Nucleic Acids Research 28, 27 30.
-
(2000)
Nucleic Acids Research
, vol.28
, pp. 27-30
-
-
Kanehisa, M.1
Goto, S.2
-
12
-
-
0034135920
-
Expression of p19INK4d, CDK4, CDK6 in glioblastoma multiforme
-
Lam, P. Y., Di Tomaso, E., Ng, H. K., Pang, J. C., Roussel, M. F., and Hjelm, N. M. (2000). Expression of p19INK4d, CDK4, CDK6 in glioblastoma multiforme. British Journal of Neurosurgery 14, 28 32.
-
(2000)
British Journal of Neurosurgery
, vol.14
, pp. 28-32
-
-
Lam, P.Y.1
Di Tomaso, E.2
Ng, H.K.3
Pang, J.C.4
Roussel, M.F.5
Hjelm, N.M.6
-
13
-
-
42649140560
-
Network-constrained regularization and variable selection for analysis of genomic data
-
Li, C. and Li, H. (2008). Network-constrained regularization and variable selection for analysis of genomic data. Bioinformatics 24, 1175 1182.
-
(2008)
Bioinformatics
, vol.24
, pp. 1175-1182
-
-
Li, C.1
Li, H.2
-
15
-
-
33749629724
-
Identification of novel candidate target genes in amplicons of Glioblastoma multiforme tumors detected by expression and CGH microarray profiling
-
Ruano, Y., Mollejo, M., Ribalta, T., Fiaño, C., Camacho, F. I., Gómez, E., de Lope, A. R., Hernandez-Moneo, J. L., Martínez, P., and Meléndez, B. (2006). Identification of novel candidate target genes in amplicons of Glioblastoma multiforme tumors detected by expression and CGH microarray profiling. Molecular Cancer 5, 39.
-
(2006)
Molecular Cancer
, vol.5
, pp. 39
-
-
Ruano, Y.1
Mollejo, M.2
Ribalta, T.3
Fiaño, C.4
Camacho, F.I.5
Gómez, E.6
De Lope, A.R.7
Hernandez-Moneo, J.L.8
Martínez, P.9
Meléndez, B.10
-
16
-
-
1642332084
-
Integration of Smad and forkhead pathways in the control of neuroepithelial and glioblastoma cell proliferation
-
Seoane, J., Le, H. V., Shen, L., Anderson, S. A., and Massagui, J. (2004). Integration of Smad and forkhead pathways in the control of neuroepithelial and glioblastoma cell proliferation. Cell, 117, 211 223.
-
(2004)
Cell
, vol.117
, pp. 211-223
-
-
Seoane, J.1
Le, H.V.2
Shen, L.3
Anderson, S.A.4
Massagui, J.5
-
18
-
-
34547844074
-
A Markov random field model for network-based analysis of genomic data
-
Wei, Z. and Li, H. (2007). A Markov random field model for network-based analysis of genomic data. Bioinformatics 23, 1537 1544.
-
(2007)
Bioinformatics
, vol.23
, pp. 1537-1544
-
-
Wei, Z.1
Li, H.2
-
19
-
-
33645035051
-
Model selection and estimation in regression with grouped variables
-
Yuan, M. and Lin, Y. (2006). Model selection and estimation in regression with grouped variables. Journal of the Royal Statistical Society, Series B 68, 49 67.
-
(2006)
Journal of the Royal Statistical Society, Series B
, vol.68
, pp. 49-67
-
-
Yuan, M.1
Lin, Y.2
-
21
-
-
34447335946
-
Grouped and hierarchical model selection through composite absolute penalties
-
To appear in
-
Zhao, P., Rocha, G., and Yu, B. (2006). Grouped and hierarchical model selection through composite absolute penalties. To appear in Annals of Statistics.
-
(2006)
Annals of Statistics.
-
-
Zhao, P.1
Rocha, G.2
Yu, B.3
-
22
-
-
15944363312
-
Classification of gene microarrays by penalized logistic regression
-
Zhu, J. and Hastie, T. (2004). Classification of gene microarrays by penalized logistic regression. Biostatistics 5, 427 443.
-
(2004)
Biostatistics
, vol.5
, pp. 427-443
-
-
Zhu, J.1
Hastie, T.2
-
23
-
-
60849121073
-
Network-based support vector machine for classification of microarray samples
-
Zhu, Y., Shen, X., and Pan, W. (2009). Network-based support vector machine for classification of microarray samples. BMC Bioinformatics 10 (Suppl 1) S21.
-
(2009)
BMC Bioinformatics
, vol.10
, Issue.SUPPL. 1
, pp. 21
-
-
Zhu, Y.1
Shen, X.2
Pan, W.3
|