Multiplexed Luminex xMAP assay for detection and identification of five adenovirus serotypes associated with epidemics of respiratory disease in adults

Journal of Clinical Microbiology

Volumn 48, Issue 6, 2010, Pages 2217-2222

  Washington, Cicely ^a   Metzgar, David ^b   Hazbón, Manzour Hernando ^a   Binn, Leonard ^a   Lyons, Arthur ^a   Coward, Carl ^a   Kuschner, Robert ^a  

^a WALTER REED ARMY INSTITUTE OF RESEARCH   (United States)

^b NAVAL MEDICAL CENTER SAN DIEGO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS DNA;

ACUTE RESPIRATORY TRACT DISEASE; ARTICLE; CROSS REACTION; DIAGNOSTIC ACCURACY; DISEASE ASSOCIATION; DNA EXTRACTION; EPIDEMIC; GENE SEQUENCE; HUMAN; HUMAN ADENOVIRUS; HUMAN ADENOVIRUS 14; HUMAN ADENOVIRUS 21; HUMAN ADENOVIRUS 3; HUMAN ADENOVIRUS 4; INFLUENZA VIRUS A H1N1; INFLUENZA VIRUS B; MICROBIOLOGY; MULTIPLEXED LUMINEX XMAP ASSAY; NONHUMAN; NUCLEOTIDE SEQUENCE; PARAINFLUENZA VIRUS 2; PARAINFLUENZA VIRUS 3; POLYMERASE CHAIN REACTION; PREVALENCE; PRIORITY JOURNAL; SENSITIVITY AND SPECIFICITY; SEROTYPE; THROAT CULTURE; VACCINATION; VIRUS DETECTION; VIRUS IDENTIFICATION; VIRUS ISOLATION; VIRUS STRAIN; WESTERN HEMISPHERE;

ADENOVIRUS INFECTIONS, HUMAN; ADENOVIRUSES, HUMAN; ADULT; DISEASE OUTBREAKS; DNA PRIMERS; HUMANS; POLYMERASE CHAIN REACTION; RESPIRATORY TRACT DISEASES; SENSITIVITY AND SPECIFICITY; VIROLOGY;

ADENOVIRIDAE; HUMAN ADENOVIRUS;

EID: 77952911341     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.00029-10     Document Type: Article

References (37)

1. Adhikary, A. K., T. Inada, U. Banik, J. Numaga, and N. Okabe. 2004. Identification of subgenus C adenoviruses by fiber-based multiplex PCR. J. Clin. Microbiol. 42:670-673.
2. Adrian, T., G. Wadell, J. C. Hierholzer, and R. Wigand. 1986. DNA restriction analysis of adenovirus prototypes 1 to 41. Arch. Virol. 91:277-290.
3. Akalu, A., W. Seidel, H. Liebermann, U. Bauer, and L. Dohner. 1998. Rapid identification of subgenera of human adenovirus by serological and PCR assays. J. Virol. Methods 71:187-196.
4. Allard, A., B. Albinsson, and G. Wadell. 2001. Rapid typing of human adenoviruses by a general PCR combined with restriction endonuclease analysis. J. Clin. Microbiol. 39:498-505.
5. Blasiole, D. A., D. Metzgar, L. T. Daum, M. A. Ryan, J. Wu, C. Wills, C. T. Le, N. E. Freed, C. J. Hansen, G. C. Gray, and K. L. Russell. 2004. Molecular analysis of adenovirus isolates from vaccinated and unvaccinated young adults. J. Clin. Microbiol. 42:1686-1693.
6. Chmielewicz, B., A. Nitsche, B. Schweiger, and H. Ellerbrok. 2005. Development of a PCR-based assay for detection, quantification, and genotyping of human adenoviruses. Clin. Chem. 51:1365-1373.
7. Damen, M., R. Minnaar, P. Glasius, A. van der Ham, G. Koen, P. Wertheim, and M. Beld. 2008. Real-time PCR with an internal control for detection of all known human adenovirus serotypes. J. Clin. Microbiol. 46:3997-4003.
8. Ebner, K., M. Rauch, S. Preuner, and T. Lion. 2006. Typing of human adenoviruses in specimens from immunosuppressed patients by PCR-fragment length analysis and real-time quantitative PCR. J. Clin. Microbiol. 44:2808-2815.
9. Elder, B. L., S. A. Hansen, J. A. Kellogg, F. J. Marzik, and R. J. Zabransky. 1997. Cumitech 31, Verification and validation of procedures in the clinical microbiology laboratory. Coordinating ed., B. W. McCurdy. ASM Press, Washington, DC.
10. Gaydos, C. A., and J. C. Gaydos. 1995. Adenovirus vaccines in the U.S. military. Mil. Med. 160:300-304.
11. Gerna, G., E. Cattaneo, M. G. Revello, and M. Battaglia. 1982. Grouping of human adenoviruses by early antigen reactivity. J. Infect. Dis. 145:678-682.
12. Gu, Z., S. W. Belzer, C. S. Gibson, M. J. Bankowski, and R. T. Hayden. 2003. Multiplexed, real-time PCR for quantitative detection of human adenovirus. J. Clin. Microbiol. 41:4636-4641.
13. Hierholzer, J. 1995. Adenoviruses, p. 169-188. In E. H. Lennette, D. A. Lennette, and E. T. Lennette (ed.), Diagnostic procedures for viral, rickettsial, and chlamydial infections, 7th ed. American Public Health Association, Washington, DC.
14. Hierholzer, J. C. 1992. Adenoviruses in the immunocompromised host. Clin. Microbiol. Rev. 5:262-274.
15. Houng, H. S., S. Clavio, K. Graham, R. Kuschner, W. Sun, K. L. Russell, and L. N. Binn. 2006. Emergence of a new human adenovirus type 4 (Ad4) genotype: identification of a novel inverted terminal repeated (ITR) sequence from majority of Ad4 isolates from US military recruits. J. Clin. Virol. 35:381-387.
16. Kolavic-Gray, S. A., L. N. Binn, J. L. Sanchez, S. B. Cersovsky, C. S. Polyak, F. Mitchell-Raymundo, L. V. Asher, D. W. Vaughn, B. H. Feighner, and B. L. Innis. 2002. Large epidemic of adenovirus type 4 infection among military trainees: epidemiological, clinical, and laboratory studies. Clin. Infect. Dis. 35:808-818.
17. Krunic, N., T. D. Yager, D. Himsworth, F. Merante, S. Yaghoubian, and R. Janeczko. 2007. xTAG RVP assay: analytical and clinical performance. J. Clin. Virol. 40(Suppl. 1):S39-S46.
18. Mahony, J., S. Chong, F. Merante, S. Yaghoubian, T. Sinha, C. Lisle, and R. Janeczko. 2007. Development of a respiratory virus panel test for detection of twenty human respiratory viruses by use of multiplex PCR and a fluid microbead-based assay. J. Clin. Microbiol. 45:2965-2970.
19. Malasig, M. D., P. R. Goswami, L. K. Crawford-Miksza, D. P. Schnurr, and G. C. Gray. 2001. Simplified microneutralization test for serotyping adenovirus isolates. J. Clin. Microbiol. 39:2984-2986.
20. Metzgar, D., M. Osuna, A. E. Kajon, A. W. Hawksworth, M. Irvine, and K. L. Russell. 2007. Abrupt emergence of diverse species B adenoviruses at US military recruit training centers. J. Infect. Dis. 196:1465-1473.
21. Metzgar, D., M. Osuna, S. Yingst, M. Rakha, K. Earhart, D. Elyan, H. Esmat, M. D. Saad, A. Kajon, J. Wu, G. C. Gray, M. A. Ryan, and K. L. Russell. 2005. PCR analysis of Egyptian respiratory adenovirus isolates, including identification of species, serotypes, and coinfections. J. Clin. Microbiol. 43:5743-5752.
22. Pabbaraju, K., K. Tokaryk, S. Wong, and J. Fox. 2008. Comparison of the Luminex xTAG respiratory viral panel with in-house nucleic acid amplification tests for diagnosis of respiratory virus infections. J. Clin. Microbiol. 46:3056-3062.
23. Raty, R., M. Kleemola, K. Melen, M. Stenvik, and I. Julkunen. 1999. Efficacy of PCR and other diagnostic methods for the detection of respiratory adenoviral infections. J. Med. Virol. 59:66-72.
24. Rubin, B. A. 1993. Clinical picture and epidemiology of adenovirus infections (a review). Acta Microbiol. Hung. 40:303-323.
25. Ryan, M. A., G. C. Gray, B. Smith, J. A. McKeehan, A. W. Hawksworth, and M. D. Malasig. 2002. Large epidemic of respiratory illness due to adenovirus types 7 and 3 in healthy young adults. Clin. Infect. Dis. 34:577-582.
26. Sanchez, J. L., L. N. Binn, B. L. Innis, R. D. Reynolds, T. Lee, F. Mitchell-Raymundo, S. C. Craig, J. P. Marquez, G. A. Shepherd, C. S. Polyak, J. Conolly, and K. F. Kohlhase. 2001. Epidemic of adenovirus-induced respiratory illness among US military recruits: epidemiologic and immunologic risk factors in healthy, young adults. J. Med. Virol. 65:710-718.
27. Sarantis, H., G. Johnson, M. Brown, M. Petric, and R. Tellier. 2004. Comprehensive detection and serotyping of human adenoviruses by PCR and sequencing. J. Clin. Microbiol. 42:3963-3969.
28. Schmitz, H., R. Wigand, and W. Heinrich. 1983. Worldwide epidemiology of human adenovirus infections. Am. J. Epidemiol. 117:455-466.
29. van der Veen, J., and A. Prins. 1960. Studies of the significance of the recall phenomenon in the antibody response to adenovirus vaccine and infection. J. Immunol. 84:562-568.
30. Vora, G. J., B. Lin, K. Gratwick, C. Meador, C. Hansen, C. Tibbetts, D. A. Stenger, M. Irvine, D. Seto, A. Purkayastha, N. E. Freed, M. G. Gibson, K. Russell, and D. Metzgar. 2006. Co-infections of adenovirus species in previously vaccinated patients. Emerg. Infect. Dis. 12:921-930.
31. Wadell, G., M. L. Hammarskjold, G. Winberg, T. M. Varsanyi, and G. Sundell. 1980. Genetic variability of adenoviruses. Ann. N. Y. Acad. Sci. 354:16-42.
32. Walls, T., A. G. Shankar, and D. Shingadia. 2003. Adenovirus: an increasingly important pathogen in paediatric bone marrow transplant patients. Lancet Infect. Dis. 3:79-86.
33. Wong, S., K. Pabbaraju, X. L. Pang, B. E. Lee, and J. D. Fox. 2008. Detection of a broad range of human adenoviruses in respiratory tract samples using a sensitive multiplex real-time PCR assay. J. Med. Virol. 80:856-865.
34. Wood, S. R., I. R. Sharp, E. O. Caul, I. Paul, A. S. Bailey, M. Hawkins, S. Pugh, J. Treharne, and S. Stevenson. 1997. Rapid detection and serotyping of adenovirus by direct immunofluorescence. J. Med. Virol. 51:198-201.
35. Xu, W., and D. D. Erdman. 2001. Type-specific identification of human adenovirus 3, 7, and 21 by a multiplex PCR assay. J. Med. Virol. 64:537-542.
36. Xu, W., M. C. McDonough, and D. D. Erdman. 2000. Species-specific identification of human adenoviruses by a multiplex PCR assay. J. Clin. Microbiol. 38:4114-4120.
37. Zhu, Z., Y. Zhang, S. Xu, P. Yu, X. Tian, L. Wang, Z. Liu, L. Tang, N. Mao, Y. Ji, C. Li, Z. Yang, S. Wang, J. Wang, D. Li, and W. Xu. 2009. Outbreak of acute respiratory disease in China caused by B2 species of adenovirus type 11. J. Clin. Microbiol. 47:697-703.