Payao: A community platform for SBML pathway model curation

Bioinformatics

Volumn 26, Issue 10, 2010, Pages 1381-1383

  Matsuoka, Yukiko ^a,b   Ghosh, Samik ^a   Kikuchi, Norihiro ^c   Kitano, Hiroaki ^a,d,e  

^a Systems Biology Institute   (Japan)

^b JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

^c Mitsui Knowledge Industry Co   (Japan)

^d OKINAWA INSTITUTE OF SCIENCE AND TECHNOLOGY GRADUATE UNIVERSITY   (Japan)

^e SONY COMPUTER SCIENCE LABORATORIES INC   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOLOGY; COMPUTER INTERFACE; COMPUTER PROGRAM; FACTUAL DATABASE; GENE REGULATORY NETWORK; INFORMATION RETRIEVAL; METHODOLOGY; SYSTEMS BIOLOGY;

COMPUTATIONAL BIOLOGY; DATABASES, FACTUAL; GENE REGULATORY NETWORKS; INFORMATION STORAGE AND RETRIEVAL; SOFTWARE; SYSTEMS BIOLOGY; USER-COMPUTER INTERFACE;

EID: 77952794294     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btq143     Document Type: Article

References (7)

1. Bauer-Mehren, A. et al. (2009) Pathway databases and tools for their exploitation: benefits, current limitations and challenges. Mol. Syst. Biol., 5, 290.
2. Funahashi, A. et al. (2008) CellDesigner 3.5: a versatile modeling tool for biochemical networks. Pro. IEEE, 96, 1254-1265.
3. Hucka, M. et al. (2003) The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinformatics, 19, 524-531.
4. Le Novère, N. et al. (2005) Minimum information requested in the annotation of biochemical models (MIRIAM). Nat. Biotechnol., 23, 1509-1515.
5. Le Novère, N. et al. (2009) Systems biology graphical notation. Nat. Biotech., 8, 735-741.
6. Pico, A. et al. (2008) WikiPathways: pathway editing for the people. PLoS Biol., 6, e184.
7. Payao User Guide. (2009)Available at http://celldesigner.org/payao/payaopreview.html (last accessed date April 1, 2010)