메뉴 건너뛰기




Volumn 283, Issue 6, 2010, Pages 565-574

Haplotype analyses, mechanism and evolution of common double mutants in the human LDL receptor gene

Author keywords

Age of mutations inference; Familial hypercholesterolemia; Linkage disequilibrium; Populations history; Tag SNPs

Indexed keywords

GENOMIC DNA; LOW DENSITY LIPOPROTEIN RECEPTOR; MUTANT PROTEIN;

EID: 77952787182     PISSN: 16174615     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00438-010-0541-8     Document Type: Article
Times cited : (6)

References (36)
  • 2
    • 0031612929 scopus 로고    scopus 로고
    • Recommendations for a nomenclature system for human gene mutations
    • Antonarakis SE the Nomenclature Working Group
    • Antonarakis SE, the Nomenclature Working Group (1998) Recommendations for a nomenclature system for human gene mutations. Hum Mutat 11:1-3
    • (1998) Hum Mutat , vol.11 , pp. 1-3
  • 3
    • 38349133635 scopus 로고    scopus 로고
    • Familial hypercholesterolaemia in Portugal
    • on behalf of the investigators of the Portuguese FH study 1
    • Bourbon M, Alves AC, Medeiros AM, Silva S, Soutar AK, on behalf of the investigators of the Portuguese FH study 1 (2008) Familial hypercholesterolaemia in Portugal. Atherosclerosis 196:633-642
    • (2008) Atherosclerosis , vol.196 , pp. 633-642
    • Bourbon, M.1    Alves, A.C.2    Medeiros, A.M.3    Silva, S.4    Soutar, A.K.5
  • 4
    • 66249138829 scopus 로고    scopus 로고
    • Genetic diagnosis of familial hypercholesterolaemia: The importance of functional analysis of potential splice-site mutations
    • Bourbon M, Duarte MA, Alves AC, Medeiros AM, Marques L, Soutar AK (2009) Genetic diagnosis of familial hypercholesterolaemia: the importance of functional analysis of potential splice-site mutations. J Med Genet 46:352-3577
    • (2009) J Med Genet , vol.46 , pp. 352-3577
    • Bourbon, M.1    Duarte, M.A.2    Alves, A.C.3    Medeiros, A.M.4    Marques, L.5    Soutar, A.K.6
  • 5
    • 0346373654 scopus 로고    scopus 로고
    • Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium
    • Carlson CS, Eberle MA, Rieder MJ, Yi Q, Kruglyak L, Nickerson DA (2004) Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium. Hum Genet 74:106-120
    • (2004) Hum Genet , vol.74 , pp. 106-120
    • Carlson, C.S.1    Eberle, M.A.2    Rieder, M.J.3    Yi, Q.4    Kruglyak, L.5    Nickerson, D.A.6
  • 6
    • 0036884620 scopus 로고    scopus 로고
    • A double mutant [N543H+2393del9] allele in the LDL receptor gene in familial hypercholesterolemia: EVect on plasma cholesterol levels and cardiovascular disease
    • Spanish Group of FH
    • Castillo S, Reyes G, Tejedor D, Mozas P, Suarez Y, Lasuncion MA, Cenarro A, Civeira F, Alonso R, Mata P, Pocovi M, Spanish Group of FH (2002) A double mutant [N543H+2393del9] allele in the LDL receptor gene in familial hypercholesterolemia: eVect on plasma cholesterol levels and cardiovascular disease. Hum Mutat 20:477
    • (2002) Hum Mutat , vol.20 , pp. 477
    • Castillo, S.1    Reyes, G.2    Tejedor, D.3    Mozas, P.4    Suarez, Y.5    Lasuncion, M.A.6    Cenarro, A.7    Civeira, F.8    Alonso, R.9    Mata, P.10    Pocovi, M.11
  • 8
    • 0032248337 scopus 로고    scopus 로고
    • IdentiWcation of recurrent and novel mutations in the LDL receptor gene in Spanish patients with familial hypercholesterolemia. Mutations in brief no. 135. Online
    • Cenarro A, Jensen HK, Casao E, Civeira F, González Bonillo J, Rodríguez Rey JC, Gregersen N, Pocoví M (1998) IdentiWcation of recurrent and novel mutations in the LDL receptor gene in Spanish patients with familial hypercholesterolemia. Mutations in brief no. 135. Online. Hum Mutat 11:413
    • (1998) Hum Mutat , vol.11 , pp. 413
    • Cenarro, A.1    Jensen, H.K.2    Casao, E.3    Civeira, F.4    González Bonillo, J.5    Rodríguez Rey, J.C.6    Gregersen, N.7    Pocoví, M.8
  • 9
    • 0031868527 scopus 로고    scopus 로고
    • Recurrence of the D409H mutation in Spanish Gaucher disease patients: Description of a new homozygous patient and haplotype analysis
    • Chabás A, Gort L, Montfort M, Castelló F, Domínguez MC, Grinberg D, Vilageliu L (1998) Recurrence of the D409H mutation in Spanish Gaucher disease patients: description of a new homozygous patient and haplotype analysis. J Med Genet 35:775-777
    • (1998) J Med Genet , vol.35 , pp. 775-777
    • Chabás, A.1    Gort, L.2    Montfort, M.3    Castelló, F.4    Domínguez, M.C.5    Grinberg, D.6    Vilageliu, L.7
  • 11
    • 0034751795 scopus 로고    scopus 로고
    • Genetic diagnosis of familial hypercholesterolemia in a South European outbreed population: InXuence of low-density lipoprotein (LDL) receptor gene mutations on treatment response to simvastatin in total, LDL and highdensity lipoprotein cholesterol
    • Chaves FJ, Real JT, Garcia-Garcia AB, Civera M, Armengol ME, Ascaso JF, Carmena R (2001) Genetic diagnosis of familial hypercholesterolemia in a South European outbreed population: inXuence of low-density lipoprotein (LDL) receptor gene mutations on treatment response to simvastatin in total, LDL and highdensity lipoprotein cholesterol. J Clin Endocrinol Metab 86:4926-4932
    • (2001) J Clin Endocrinol Metab , vol.86 , pp. 4926-4932
    • Chaves, F.J.1    Real, J.T.2    Garcia-Garcia, A.B.3    Civera, M.4    Armengol, M.E.5    Ascaso, J.F.6    Carmena, R.7
  • 12
    • 0032556362 scopus 로고    scopus 로고
    • Molecular epidemiology of familial hypercholesterolemia
    • Defesche J, Kastelein JJ (1998) Molecular epidemiology of familial hypercholesterolemia. Lancet 352:1643-1644
    • (1998) Lancet , vol.352 , pp. 1643-1644
    • Defesche, J.1    Kastelein, J.J.2
  • 13
    • 0033987736 scopus 로고    scopus 로고
    • Mutation nomenclature extensions and suggestions to describe complex mutations: A discussion
    • Den Dunnen JT, Antonarakis SE (2000) Mutation nomenclature extensions and suggestions to describe complex mutations: a discussion. Human Mutat 15:7-12
    • (2000) Human Mutat , vol.15 , pp. 7-12
    • Den Dunnen, J.T.1    Antonarakis, S.E.2
  • 14
    • 0035007057 scopus 로고    scopus 로고
    • Recent origin and spread of a common Lithuanian mutation, G197del LDLR, causing familial hypercholesterolemia: Positive selection is not always necessary to account for disease incidence among Ashkenazi Jews
    • Meiner V
    • Durst R, Colombo R, Shpitzen S, Avi LB, Friedlander Y, Wexler R, Raal FJ, Marais DA, Defesche JC, Mandelshtam MY, Kotze MJ, Leitersdorf E, Meiner V (2001) Recent origin and spread of a common Lithuanian mutation, G197del LDLR, causing familial hypercholesterolemia: positive selection is not always necessary to account for disease incidence among Ashkenazi Jews. Am J Hum Genet 68:1172-1188
    • (2001) Am J Hum Genet , vol.68 , pp. 1172-1188
    • Durst, R.1    Colombo, R.2    Shpitzen, S.3    Avi, L.B.4    Friedlander, Y.5    Wexler, R.6    Raal, F.J.7    Marais, D.A.8    Defesche, J.C.9    Mandelshtam, M.Y.10    Kotze, M.J.11    Leitersdorf, E.12
  • 16
    • 0000600880 scopus 로고    scopus 로고
    • Familial hypercholesterolemia
    • Scriver CR, Beaudet AL, Sly WS, Valle D (eds), 8th edn., McGraw-Hill, New York
    • Goldstein JL, Hobbs HH, Brown MS (2001) Familial hypercholesterolemia. In: Scriver CR, Beaudet AL, Sly WS, Valle D (eds) The metabolic and molecular basis of inherited disease, 8th edn. McGraw-Hill, New York, pp 2863-2913
    • (2001) The Metabolic and Molecular Basis of Inherited Disease , pp. 2863-2913
    • Goldstein, J.L.1    Hobbs, H.H.2    Brown, M.S.3
  • 17
    • 33746497990 scopus 로고    scopus 로고
    • The LDLR variant T705I does not cause the typical phenotype of familial hypercholesterolaemia
    • Graham CA, Wright WT, McIlhatton BP, Young IS, Nicholls DP (2006) The LDLR variant T705I does not cause the typical phenotype of familial hypercholesterolaemia. Atherosclerosis 188:218-219
    • (2006) Atherosclerosis , vol.188 , pp. 218-219
    • Graham, C.A.1    Wright, W.T.2    McIlhatton, B.P.3    Young, I.S.4    Nicholls, D.P.5
  • 18
    • 0033832874 scopus 로고    scopus 로고
    • I705 variant in the low density lipoprotein receptor gene has no eVect on plasma cholesterol levels
    • Heath KE, Whittal RA, Miller GJ, Humphries S (2000) I705 variant in the low density lipoprotein receptor gene has no eVect on plasma cholesterol levels. J Med Genet 37:713-715
    • (2000) J Med Genet , vol.37 , pp. 713-715
    • Heath, K.E.1    Whittal, R.A.2    Miller, G.J.3    Humphries, S.4
  • 19
    • 0027026881 scopus 로고
    • Molecular genetics of the LDL receptor gene in familial hypercholesterolemia
    • Hobbs HH, Brown MS, Goldstein JL (1992) Molecular genetics of the LDL receptor gene in familial hypercholesterolemia. Hum Mutat 1:445-466
    • (1992) Hum Mutat , vol.1 , pp. 445-466
    • Hobbs, H.H.1    Brown, M.S.2    Goldstein, J.L.3
  • 20
    • 61849159311 scopus 로고    scopus 로고
    • EVects of intronic mutations in the LDLR gene on pre-mRNA splicing: Comparison of wet-lab and bioinformatics analyses
    • Holla L, Nakken S, Mattingsdal M, Ranheim T, Berge KE, Defesche JC, Leren TP (2009) EVects of intronic mutations in the LDLR gene on pre-mRNA splicing: Comparison of wet-lab and bioinformatics analyses. Mol Genet Metab 96:245-252
    • (2009) Mol Genet Metab , vol.96 , pp. 245-252
    • Holla, L.1    Nakken, S.2    Mattingsdal, M.3    Ranheim, T.4    Berge, K.E.5    Defesche, J.C.6    Leren, T.P.7
  • 21
    • 0029779010 scopus 로고    scopus 로고
    • High sensitivity of the single-strand conformation polymorphism method for detecting sequence variations in the low-density lipoprotein receptor gene validated by DNA sequencing
    • Jensen HK, Jensen LG, Hansen PS, Faergeman O, Gregersen N (1996) High sensitivity of the single-strand conformation polymorphism method for detecting sequence variations in the low-density lipoprotein receptor gene validated by DNA sequencing. Clin Chem 42:1140-1146
    • (1996) Clin Chem , vol.42 , pp. 1140-1146
    • Jensen, H.K.1    Jensen, L.G.2    Hansen, P.S.3    Faergeman, O.4    Gregersen, N.5
  • 23
    • 0034184071 scopus 로고    scopus 로고
    • Mutation analysis in 36 unrelated Spanish subjects with familial hypercholesterolemia: IdentiWcation of 3 novel mutations in the LDL receptor gene
    • Mozas P, Cenarro A, Civeira F, Castillo S, Ros E, Pocovi M (2000) Mutation analysis in 36 unrelated Spanish subjects with familial hypercholesterolemia: identiWcation of 3 novel mutations in the LDL receptor gene. Hum Mutat 15:483-484
    • (2000) Hum Mutat , vol.15 , pp. 483-484
    • Mozas, P.1    Cenarro, A.2    Civeira, F.3    Castillo, S.4    Ros, E.5    Pocovi, M.6
  • 25
    • 0031838215 scopus 로고    scopus 로고
    • Phenotypic variation in heterozygous familial hypercholesterolemia: A comparison of Chinese patients with the same of similar mutations in the LDL receptor gene in China or Canada
    • Pimstone SN, Sun XM, du Souich C, Frohlich JJ, Hayden MR, Soutar AK (1998) Phenotypic variation in heterozygous familial hypercholesterolemia: a comparison of Chinese patients with the same of similar mutations in the LDL receptor gene in China or Canada. Arterioscler Thromb Vasc Biol 18:309-315
    • (1998) Arterioscler Thromb Vasc Biol , vol.18 , pp. 309-315
    • Pimstone, S.N.1    Sun, X.M.2    Du Souich, C.3    Frohlich, J.J.4    Hayden, M.R.5    Soutar, A.K.6
  • 26
    • 0034897603 scopus 로고    scopus 로고
    • Using linked markers to infer the age of a mutation
    • Rannala B, Bertorelle G (2001) Using linked markers to infer the age of a mutation. Hum Mutat 18:87-100
    • (2001) Hum Mutat , vol.18 , pp. 87-100
    • Rannala, B.1    Bertorelle, G.2
  • 27
    • 0034973984 scopus 로고    scopus 로고
    • High-resolution multipoint linkagedisequilibrium mapping in the context of a human genome sequence
    • Rannala B, Reeve JP (2001) High-resolution multipoint linkagedisequilibrium mapping in the context of a human genome sequence. Am J Hum Genet 69:159-178
    • (2001) Am J Hum Genet , vol.69 , pp. 159-178
    • Rannala, B.1    Reeve, J.P.2
  • 28
    • 0041627745 scopus 로고    scopus 로고
    • Joint Bayesian estimation of mutation location and age using linkage disequilibrium
    • Lihue, Hawaii, USA, 3-7 January 2003. accessed 17 February 2010
    • Rannala B, Reeve JP (2003) Joint Bayesian estimation of mutation location and age using linkage disequilibrium. PaciWc Symposium on Biocomputing, Lihue, Hawaii, USA, 8:526-534, 3-7 January 2003. http://helix-web.stanford.edu/psb03/ #humvar (accessed 17 February 2010)
    • (2003) PaciWc Symposium on Biocomputing , vol.8 , pp. 526-534
    • Rannala, B.1    Reeve, J.P.2
  • 30
    • 79551536959 scopus 로고
    • El Pais-Aguilar, Madrid 91, 95, 103, 113 and 139
    • Sanchez-Cerezo S (ed) (1995) Atlas histórico universal. El Pais-Aguilar, Madrid, pp 44-45, 91, 95, 103, 113 and 139
    • (1995) Atlas Histórico Universal , pp. 44-45
    • Sanchez-Cerezo, S.1
  • 31
    • 0027731054 scopus 로고
    • Phenotypic expression of familial hypercholesterolemia in central and southern Tunisia
    • Slimane MN, Pousse H, Maatong F, Hammami M, Ben Farhat MH (1993) Phenotypic expression of familial hypercholesterolemia in central and southern Tunisia. Atherosclerosis 104:153-158
    • (1993) Atherosclerosis , vol.104 , pp. 153-158
    • Slimane, M.N.1    Pousse, H.2    Maatong, F.3    Hammami, M.4    Ben Farhat, M.H.5
  • 32
    • 0028177458 scopus 로고
    • Familial hypercholesterolemia in China IdentiWcation of mutations in the LDL-receptor gene that result in a receptor-negative phenotype
    • Sun XM, Patel DD, Webb JC, Knight BL, Fan LM, Cai HJ, Soutar AK (1994) Familial hypercholesterolemia in China. IdentiWcation of mutations in the LDL-receptor gene that result in a receptor-negative phenotype. Arterioscler Thromb 14:85-94
    • (1994) Arterioscler Thromb , vol.14 , pp. 85-94
    • Sun, X.M.1    Patel, D.D.2    Webb, J.C.3    Knight, B.L.4    Fan, L.M.5    Cai, H.J.6    Soutar, A.K.7
  • 34
    • 0033910668 scopus 로고    scopus 로고
    • New estimates of intergenerational time intervals for the calculation of age and origins of mutation
    • Tremblay M, Vezina H (2000) New estimates of intergenerational time intervals for the calculation of age and origins of mutation. Am J Hum Genet 66:651-658
    • (2000) Am J Hum Genet , vol.66 , pp. 651-658
    • Tremblay, M.1    Vezina, H.2
  • 36
    • 33646028514 scopus 로고    scopus 로고
    • Contrasting linkage-disequilibrium patterns between cases and controls as a novel associationmapping method
    • Zaykin DV, Meng Z, Ehm MG (2006) Contrasting linkage-disequilibrium patterns between cases and controls as a novel associationmapping method. Am J Hum Genet 78:737-746
    • (2006) Am J Hum Genet , vol.78 , pp. 737-746
    • Zaykin, D.V.1    Meng, Z.2    Ehm, M.G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.