Terrabacter aeriphilus sp. nov., isolated from an air sample

International Journal of Systematic and Evolutionary Microbiology

Volumn 60, Issue 5, 2010, Pages 1130-1134

  Weon, Hang Yeon ^a   Son, Jung A ^a   Yoo, Seung Hee ^a   Kim, Byung Yong ^a   Kwon, Soon Wo ^a   Schumann, Peter ^b   Kroppenstedt, Reiner ^b   Stackebrandt, Erko ^b  

^a National Institute of Agricultural Science   (South Korea)

^b LEIBNIZ INSTITUTE DSMZ GERMAN COLLECTION OF MICROORGANISMS AND CELL CULTURES   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIAL RNA; CARDIOLIPIN; FATTY ACID; GLUCOSE; GLYCINE; GLYCOLIPID; LL DIAMINODIPIMELIC ACID A3GAMMA; MANNOSE; MENAQUINONE; MYCOLIC ACID; OXIDOREDUCTASE; PEPTIDOGLYCAN; PHOSPHATIDYLETHANOLAMINE; PHOSPHATIDYLINOSITOL; PHOSPHOGLYCOLIPID; PIMELIC ACID DERIVATIVE; RIBOSE; RNA 16S; SODIUM CHLORIDE; UNCLASSIFIED DRUG;

AIR SAMPLING; ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATION; CONTROLLED STUDY; DNA BASE COMPOSITION; KOREA; NEIGHBOR JOINING METHOD; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; RNA SEQUENCE; SPECIES; TERRABACTER; TERRABACTER AERIPHILUS; TERRABACTER AEROLATUS; TERRABACTER LAPILLI; TERRABACTER TERRAE; TERRABACTER TUMESCENS; TERRACOCCUS LUTEUS; WHOLE CELL;

ACTINOMYCETALES; AIR MICROBIOLOGY; BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; DNA, BACTERIAL; DNA, RIBOSOMAL; FATTY ACIDS; GENES, RRNA; GENOTYPE; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHENOTYPE; PHYLOGENY; REPUBLIC OF KOREA; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY;

TERRABACTER; TERRABACTER TERRAE; TERRABACTER TUMESCENS; TERRACOCCUS LUTEUS;

EID: 77952678355     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.016444-0     Document Type: Article

References (17)

1. Chun, J., Lee, J. H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y. W. (2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259-2261.
2. Collins, M. D., Dorsch, M. & Stackebrandt, E. (1989). Transfer of Pimelobacter tumescens to Terrabacter gen. nov. as Terrabacter tumescens comb. nov. and of Pimelobacter jensenii to Nocardioides jensenii comb. nov. Int J Syst Bacteriol 39, 1-6.
3. Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief Bioinform 5, 150-163.
4. Kwon, S.-W., Kim, J.-S., Park, I.-C., Yoon, S.-H., Park, D.-H., Lim, C.-K. & Go, S.-J. (2003). Pseudomonas koreensis sp. nov., Pseudomonas umsongensis sp. nov. and Pseudomonas jinjuensis sp. nov., novel species from farm soils in Korea. Int J Syst Evol Microbiol 53, 21-27.
5. Lee, J. E., Seo, J. P., Lee, D. W., Ko, Y. H. & Lee, S. D. (2008). Terrabacter lapilli sp. nov., a novel actinomycete isolated from stone. Int J Syst Evol Microbiol 58, 1084-1088.
6. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
7. Minnikin, D. E., Alshamaony, L. & Goodfellow, M. (1975). Differentiation of Mycobacterium, Nocardia and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates. J Gen Microbiol 88, 200-204.
8. Minnikin, D. E., O'Donnell, A. G., Goodfellow, M., Alderson, G., Athalye, M., Schaal, A. & Parlett, J. H. (1984). An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 2, 233-241.
9. Montero-Barrientos, M., Rivas, R., Velázquez, E., Monte, E. & Roig, M. G. (2005). Terrabacter terrae sp. nov., a novel actinomycete isolated from soil in Spain. Int J Syst Evol Microbiol 55, 2491-2495.
10. Prauser, H., Schumann, P., Rainey, F. A., Kroppenstedt, R. M. & Stackebrandt, E. (1997). Terracoccus luteus gen. nov., sp. nov., an LL-diaminopimelic acid-containing coccoid actinomycete from soil. Int J Syst Bacteriol 47, 1218-1224.
11. Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids, MIDI Technical Note 101. Newark, DE: MIDI Inc.
12. Schleifer, K. H. & Kandler, O. (1972). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407-477.
13. Seldin, L. & Dubnau, D. (1985). Deoxyribonucleic acid homology among Bacillus polymyxa, Bacillus macerans, Bacillus azotofixans, and other nitrogen-fixing Bacillus strains. Int J Syst Bacteriol 35, 151-154.
14. Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
15. Staneck, J. L. & Roberts, G. D. (1974). Simplified approach to identification of aerobic actinomycetes by thin-layer chromatography. Appl Microbiol 28, 226-231.
16. Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
17. Weon, H. Y., Schumann, P., Kroppenstedt, R. M., Kim, B. Y., Song, J., Kwon, S. W., Go, S. J. & Stackebrandt, E. (2007). Terrabacter aerolatus sp. nov., isolated from an air sample. Int J Syst Evol Microbiol 57, 2106-2109.