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Volumn 27, Issue 4, 2010, Pages 757-760

Rapid proliferation of repetitive palindromic elements in mtDNA of the endemic baikalian sponge lubomirskia baicalensis

Author keywords

Genome evolution; Lake Baikal; MtDNA; Porifera; Repetitive DNA

Indexed keywords

MITOCHONDRIAL DNA; NUCLEOTIDE; PALINDROMIC DNA;

EID: 77952316280     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msp317     Document Type: Article
Times cited : (36)

References (30)
  • 1
    • 33644874509 scopus 로고    scopus 로고
    • An unusual source of apparent mitochondrial heteroplasmy: Duplicate mitochondrial control regions in thalassarche albatrosses
    • Abbott CL, Double MC, Trueman JW, Robinson A, Cockburn A. 2005. An unusual source of apparent mitochondrial heteroplasmy: duplicate mitochondrial control regions in Thalassarche albatrosses. Mol Ecol. 14:3605-3613.
    • (2005) Mol Ecol. , vol.14 , pp. 3605-3613
    • Abbott, C.L.1    Double, M.C.2    Trueman, J.W.3    Robinson, A.4    Cockburn, A.5
  • 2
    • 0037134778 scopus 로고    scopus 로고
    • Palindromic repetitive elements in the mitochondrial genome of Volvox
    • DOI 10.1016/S0014-5793(02)02832-6, PII S0014579302028326
    • Aono N, Shimizu T, Inoue T, Shiraishi H. 2002. Palindromic repetitive elements in the mitochondrial genome of Volvox. FEBS Lett. 521:95-99. (Pubitemid 34628466)
    • (2002) FEBS Letters , vol.521 , Issue.1-3 , pp. 95-99
    • Aono, N.1    Shimizu, T.2    Inoue, T.3    Shiraishi, H.4
  • 3
    • 0025761166 scopus 로고
    • Short dispersed repeats localized in spacer regions of chlamydomonas reinhardtii mitochondrial dna
    • Boer PH, Gray MW. 1991. Short dispersed repeats localized in spacer regions of Chlamydomonas reinhardtii mitochondrial DNA. Curr Genet. 19:309-312.
    • (1991) Curr Genet. , vol.19 , pp. 309-312
    • Boer, P.H.1    Gray, M.W.2
  • 4
    • 0035546066 scopus 로고    scopus 로고
    • What controls the length of noncoding DNA?
    • DOI 10.1016/S0959-437X(00)00249-5
    • Comeron JM. 2001. What controls the length of noncoding DNA? Curr Opin Genet Dev. 11:652-659. (Pubitemid 33000337)
    • (2001) Current Opinion in Genetics and Development , vol.11 , Issue.6 , pp. 652-659
    • Comeron, J.M.1
  • 5
    • 0018894384 scopus 로고
    • Selfish genes, the phenotype paradigm and genome evolution
    • Doolittle WF, Sapienza C. 1980. Selfish genes, the phenotype paradigm and genome evolution. Nature 284:601-603. (Pubitemid 10070865)
    • (1980) Nature , vol.284 , Issue.5757 , pp. 601-603
    • Doolittle, W.F.1    Sapienza, C.2
  • 6
    • 74049141446 scopus 로고    scopus 로고
    • The mitochondrial genomes of sponges provide evidence for multiple invasions by repetitive hairpin-forming elements (rhe
    • Erpenbeck D, Voigt O, Wörheide G, Lavrov DV. 2009. The mitochondrial genomes of sponges provide evidence for multiple invasions by repetitive hairpin-forming elements (RHE). BMC Genomics. 10:591.
    • (2009) BMC Genomics. , vol.10 , pp. 591
    • Erpenbeck, D.1    Voigt, O.2    Wörheide, G.3    Lavrov, D.V.4
  • 7
    • 52549130466 scopus 로고    scopus 로고
    • Evolution of the mitochondrial genome of metazoa as exemplified by comparison of congeneric species
    • Gissi C, Iannelli F, Pesole G. 2008. Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species. Heredity 101:301-320.
    • (2008) Heredity , vol.101 , pp. 301-320
    • Gissi, C.1    Iannelli, F.2    Pesole, G.3
  • 8
    • 33645574750 scopus 로고    scopus 로고
    • Novariation and lowsynonymous substitution rates in coral mtdna despite high nuclear variation
    • HellbergME. 2006. Novariation and lowsynonymous substitution rates in coral mtDNA despite high nuclear variation. BMC Evol Biol. 6:24.
    • (2006) BMC Evol Biol. , vol.6 , pp. 24
    • Hellberg, M.E.1
  • 9
    • 0029932106 scopus 로고    scopus 로고
    • Contribution of ultra-short invasive elements to the evolution of the mitochondrial genome in the genus Podospora
    • DOI 10.1093/nar/24.9.1734
    • Koll F, Boulay J, Belcour L, d'Aubenton-Carafa Y. 1996. Contribution of ultra-short invasive elements to the evolution of the mitochondrial genome in the genus Podospora. Nucleic Acids Res. 24:1734-1741. (Pubitemid 26137933)
    • (1996) Nucleic Acids Research , vol.24 , Issue.9 , pp. 1734-1741
    • Koll, F.1    Boulay, J.2    Belcour, L.3    D'Aubenton-Carafa, Y.4
  • 10
    • 35448993917 scopus 로고    scopus 로고
    • Key transitions in animal evolution: A mitochondrial DNA perspective
    • DOI 10.1093/icb/icm045
    • Lavrov DV. 2007. Key transitions in animal evolution: a mitochondrial DNA perspective. Integr Comp Biol. 47:734-743. (Pubitemid 47622326)
    • (2007) Integrative and Comparative Biology , vol.47 , Issue.5 , pp. 734-743
    • Lavrov, D.V.1
  • 11
    • 13944278871 scopus 로고    scopus 로고
    • Transfer RNA gene recruitment in mitochondrial DNA
    • DOI 10.1016/j.tig.2005.01.004
    • Lavrov DV, Lang BF. 2005. Transfer RNA gene recruitment in mitochondrial DNA. Trends Genet. 21:129-133. (Pubitemid 40269850)
    • (2005) Trends in Genetics , vol.21 , Issue.3 , pp. 129-133
    • Lavrov, D.V.1    Lang, B.F.2
  • 12
    • 50249083666 scopus 로고    scopus 로고
    • Reconstructing ordinal relationships in the demospongiae using mitochondrial genomic data
    • Lavrov DV, Wang X, Kelly M. 2008. Reconstructing ordinal relationships in the Demospongiae using mitochondrial genomic data. Mol Phylogenet Evol. 49:111-124.
    • (2008) Mol Phylogenet Evol. , vol.49 , pp. 111-124
    • Lavrov, D.V.1    Wang, X.2    Kelly, M.3
  • 14
    • 33645214213 scopus 로고    scopus 로고
    • Mutation pressure and the evolution of organelle genomic architecture
    • Lynch M, Koskella B, Schaack S. 2006. Mutation pressure and the evolution of organelle genomic architecture. Science 311: 1727-1730.
    • (2006) Science , vol.311 , pp. 1727-1730
    • Lynch, M.1    Koskella, B.2    Schaack, S.3
  • 16
    • 0023433511 scopus 로고
    • Tandem duplications in animal mitochondrial dnas: Variation in incidence and gene content among lizards
    • Moritz C, Brown WM. 1987. Tandem duplications in animal mitochondrial DNAs: variation in incidence and gene content among lizards. Proc Natl Acad Sci USA. 84:7183-7187.
    • (1987) Proc Natl Acad Sci USA. , vol.84 , pp. 7183-7187
    • Moritz, C.1    Brown, W.M.2
  • 17
    • 0028086940 scopus 로고
    • Palindromic repeated sequences (PRSs) in the mitochondrial genome of rice: Evidence for their insertion after divergence of the genus Oryza from the other Gramineae
    • Nakazono M, Kanno A, Tsutsumi N, Hirai A. 1994. Palindromic repeated sequences (PRSs) in the mitochondrial genome of rice: evidence for their insertion after divergence of the genus Oryza from the other Gramineae. Plant Mol Biol. 24:273-281. (Pubitemid 2045520)
    • (1994) Plant Molecular Biology , vol.24 , Issue.2 , pp. 273-281
    • Nakazono, M.1    Kanno, A.2    Tsutsumi, N.3    Hirai, A.4
  • 19
    • 0018857680 scopus 로고
    • Selfish DNA: The ultimate parasite
    • Orgel LE, Crick FH. 1980. Selfish DNA: the ultimate parasite. Nature 284:604-607. (Pubitemid 10070866)
    • (1980) Nature , vol.284 , Issue.5757 , pp. 604-607
    • Orgel, L.E.1    Crick, F.H.C.2
  • 20
    • 0033736176 scopus 로고    scopus 로고
    • Double-hairpin elements in the mitochondrial dna of allomyces: Evidence for mobility
    • Paquin B, Laforest MJ, Lang BF. 2000. Double-hairpin elements in the mitochondrial DNA of allomyces: evidence for mobility. Mol Biol Evol. 17:1760-1768.
    • (2000) Mol Biol Evol. , vol.17 , pp. 1760-1768
    • Paquin, B.1    Laforest, M.J.2    Lang, B.F.3
  • 21
    • 67649519425 scopus 로고    scopus 로고
    • Nucleotide diversity of the chlamydomonas reinhardtii plastid genome: Addressing the mutationalhazard hypothesis
    • Smith DR, Lee RW. 2009a. Nucleotide diversity of the Chlamydomonas reinhardtii plastid genome: addressing the mutationalhazard hypothesis. BMC Evol Biol. 9:120.
    • (2009) BMC Evol Biol. , vol.9 , pp. 120
    • Smith, D.R.1    Lee, R.W.2
  • 22
    • 65249087231 scopus 로고    scopus 로고
    • The mitochondrial and plastid genomes of volvox carteri: Bloated molecules rich in repetitive dna
    • Smith DR, Lee RW. 2009b. The mitochondrial and plastid genomes of Volvox carteri: bloated molecules rich in repetitive DNA. BMC Genomics 10:132.
    • (2009) BMC Genomics , vol.10 , pp. 132
    • Smith, D.R.1    Lee, R.W.2
  • 23
    • 65649099150 scopus 로고    scopus 로고
    • Fossil sponge fauna in lake baikal region
    • Veynberg E. 2009. Fossil sponge fauna in lake baikal region. Prog Mol Subcell Biol. 47:185-205.
    • (2009) Prog Mol Subcell Biol. , vol.47 , pp. 185-205
    • Veynberg, E.1
  • 24
    • 50249139663 scopus 로고    scopus 로고
    • Seventeen new complete mtdna sequences reveal extensive mitochondrial genome evolution within the demospongiae
    • Wang X, Lavrov DV. 2008. Seventeen new complete mtDNA sequences reveal extensive mitochondrial genome evolution within the Demospongiae. PLoS ONE. 3:e2723.
    • (2008) PLoS ONE. , vol.3
    • Wang, X.1    Lavrov, D.V.2
  • 25
    • 0024711790 scopus 로고
    • Putative target sites for mobile g = c rich clusters in yeast mitochondrial dna: Single elements and tandem arrays
    • Weiller G, Schueller CM, Schweyen RJ. 1989. Putative target sites for mobile G = C rich clusters in yeast mitochondrial DNA: single elements and tandem arrays. Mol Gen Genet. 218:272-283.
    • (1989) Mol Gen Genet. , vol.218 , pp. 272-283
    • Weiller, G.1    Schueller, C.M.2    Schweyen, R.J.3
  • 26
    • 33646483064 scopus 로고    scopus 로고
    • Late pliocene spongial fauna in lake baikal (from material from the deep drilling core bdp-96-1
    • Kashiwaya K, editor. Tokyo (Japan): Springer-Verlag.
    • Weinberg E, Weinberg I, Efremova S, Tanichev A, Masuda Y. 2003. Late Pliocene spongial fauna in Lake Baikal (from material from the deep drilling core BDP-96-1). In: Kashiwaya K, editor. Long continental records from Lake Baikal. Tokyo (Japan): Springer- Verlag. p. 283-293.
    • (2003) Long continental records from Lake Baikal , pp. 283-293
    • Weinberg, E.1    Weinberg, I.2    Efremova, S.3    Tanichev, A.4    Masuda, Y.5
  • 27
    • 65649086123 scopus 로고    scopus 로고
    • Identification and isolation of a retrotransposon from the freshwater sponge lubomirskia baicalensis: Implication in rapid evolution of endemic sponges
    • Wiens M, Grebenjuk VA, Schroder HC, Muller IM, Muller WE. 2009. Identification and isolation of a retrotransposon from the freshwater sponge Lubomirskia baicalensis: implication in rapid evolution of endemic sponges. Prog Mol Subcell Biol. 47:207-234.
    • (2009) Prog Mol Subcell Biol. , vol.47 , pp. 207-234
    • Wiens, M.1    Grebenjuk, V.A.2    Schroder, H.C.3    Muller, I.M.4    Muller, W.E.5
  • 28
    • 0027014050 scopus 로고
    • Genetic novelties in mitochondrial genomes of multicellular animals
    • Wolstenholme DR. 1992. Genetic novelties in mitochondrial genomes of multicellular animals. Curr Opin Genet Dev. 2: 918-925.
    • (1992) Curr Opin Genet Dev. , vol.2 , pp. 918-925
    • Wolstenholme, D.R.1
  • 29
    • 34547803197 scopus 로고    scopus 로고
    • PAML 4: Phylogenetic analysis by maximum likelihood
    • DOI 10.1093/molbev/msm088
    • Yang Z. 2007. PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol. 24:1586-1591. (Pubitemid 47236688)
    • (2007) Molecular Biology and Evolution , vol.24 , Issue.8 , pp. 1586-1591
    • Yang, Z.1
  • 30
    • 0028909805 scopus 로고
    • Evolution and structural conservation of the control region of insect mitochondrial dna
    • Zhang DX, Szymura JM, Hewitt GM. 1995. Evolution and structural conservation of the control region of insect mitochondrial DNA. J Mol Evol. 40:382-391.
    • (1995) J Mol Evol. , vol.40 , pp. 382-391
    • Zhang, D.X.1    Szymura, J.M.2    Hewitt, G.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.