Protein interaction matrix of Papaya ringspot virus type P based on a yeast two-hybrid system

Acta Virologica

Volumn 54, Issue 1, 2010, Pages 49-54

  Shen, W T ^a   Wang, M Q ^a   Yan, P ^a   Gao, L ^a   Zhou, P ^a  

^a AGRO ENVIRONMENTAL PROTECTION INSTITUTE   (China)

Author keywords

Papaya ringspot virus; Potyvirus; Protein protein interaction; Yeast two hybrid system

Indexed keywords

COAT PROTEIN; COMPLEMENTARY DNA; CYLINDRICAL INCLUSION PROTEIN; HELPER COMPONENT PROTEINASE; HYBRID PROTEIN; NUCLEAR INCLUSION A PROTEINASE; NUCLEAR INCLUSION B PROTEIN; PROTEINASE; UNCLASSIFIED DRUG; VIRAL GENOME LINKED PROTEIN; VIRUS PROTEIN; VIRUS PROTEIN 6 K1; VIRUS PROTEIN P1; VIRUS PROTEIN P3;

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; PAPAYA RINGSPOT VIRUS TYPE P; PHAGEMID; POTYVIRUS; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN PROTEIN INTERACTION; SACCHAROMYCES CEREVISIAE; TWO HYBRID SYSTEM; VIRUS INFECTION; WESTERN BLOTTING; GENETICS; METABOLISM; PAPAYA; PLANT DISEASE; PROTEIN ANALYSIS; VIROLOGY;

PAPAYA RINGSPOT VIRUS; PAPAYA RINGSPOT VIRUS P; POTYVIRUS;

CARICA; PLANT DISEASES; POTYVIRUS; PROTEIN INTERACTION MAPPING; TWO-HYBRID SYSTEM TECHNIQUES; VIRAL PROTEINS;

EID: 77952301256     PISSN: 0001723X     EISSN: None     Source Type: Journal    
DOI: 10.4149/av_2010_01_49     Document Type: Article

References (37)

1. Atkin AL, Altmura N, Leeds P, Culbertson MR. (1995) The majority of yeast UPF1 colocalizes with polyribosomes in the cytoplasm. Mol. Biol. Cell, 611-625.
2. Bateson MF, Henderson J, Chaleeprom W, Gibbs AJ, Dale JL. (1994) Papaya ringspot potyvirus isolate variability and the origin of PRSV type P (Australia). J. Gen. Virol. 75, 3547-3553.
3. Bau HJ, Cheng YH, Yu TA, Yang JS, Yeh SD. (2003) Broadspectrum resistance to different geographic strains of papaya ringspot virus in coat protein gene transgenic papaya. Phytopathology 93, 112-120.
4. Blanc S, López-Moya JJ, Wang R, García-Lampasona S, Thornbury DW, Pirone TP. (1997) A specific interaction between coat protein and helper component correlates with aphid transmission of a potyvirus. Virology 231, 141-147.
5. Blanc S, Ammar ED, Garcia-Lampasona S, Dolja VV, Llave C, Baker J, Pirone TP. (1998) Mutations in the potyvirus helper component protein effects on interactions with virions and aphid stylets. J. Gen. Virol. 79, 3119-3122.
6. Chandrika UG, Jansz ER, Wickramasinghe SMDN, Wamasuriya ND. (2003) Carotenoids in yellow- and red-fleshed papaya (Carica papaya L.). J. Sci. Food Agric. 83, 1279-1282.
7. Charron C, Nicolaï M, Gallois JL, Robaglia C, Moury B, Palloix A, Caranta C. (2008) Natural variation and functional analyses provide evidence for co-evolution between plant eIF4E and potyviral VPg. Plant J. 54, 56-68.
8. Chen KC, Chiang CH, Raja JA, Liu FL, Tai CH, Yeh SD. (2008) A single amino acid of niapro of papaya ringspot virus determines host specificity for infection of papaya. Mol. Plant Microbe Interact. 21, 1046-1057.
9. Chiang CH, Wang JJ, Jan FJ, Yeh SD, Gonsalves D. (2001) Comparative reactions of recombinant papaya ringspot viruses with chimeric coat protein (CP) genes and wild-type viruses on CP-transgenic papaya. J. Gen. Virol. 82, 2827-2836.
10. Dougherty WG, Carrington JC. (1988) Expression and function of potyviral gene products. Annu. Rev. Phytopathol. 26, 123-143.
11. Gabrenaite-Verkhovskaya R, Andreev IA, Kalinina NO, Torrance L, Taliansky ME, Mäkinen K. (2008) Cylindrical inclusion protein of potato virus A is associated with a subpopulation of particles isolated from infected plants. J. Gen. Virol. 89, 829-838.
12. Gómez de Cedrón M, Osaba L, López L, García JA. (2006) Genetic analysis of the function of the plum pox virus CI RNA helicase in virus movement. Virus Res. 116, 136-145.
13. Gonsalves D, Ishii M. (1980) Purification and serology of papaya ringspot virus. Phytopathology 70, 1028-1032.
14. Gonsalves D. (1998) Control of papaya ringspot virus in papaya a case study. Annu. Rev. Phytopathol. 36, 415-437.
15. Grzela R, Strokovska L, Andrieu JP, Dublet B, Zagorski W, Chroboczek J. (2006) Potyvirus terminal protein VPg, effector of host eukaryotic initiation factor eIF4E. Biochimie 88, 887-896.
16. Grzela R, Szolajska E, Ebel C, Madern D, Favier A, Wojtal I, Zagorski W, Chroboczek J. (2008) Virulence factor of potato virus Y, genome-attached terminal protein VPg, is a highly disordered protein. Biol. Chem. 283, 213-221.
17. Guo D, Merits A, Saarma M. (1999) Self-association and mapping of interaction domains of helper component-proteinase of potato A potyvirus. J. Gen. Virol. 80, 1127-1131.
18. Guo D, Rajamäki ML,Saarma, M, Valkonen, JP. (2001) Towards a protein interaction map of potyviruses protein interaction matrixes of two potyviruses based on the yeast two-hybrid system. J. Gen. Virol. 82, 935-939.
19. Kang SH, Lim WS, Kim KH. (2004) A protein interaction map of soybean mosaic virus strain G7H based on the yeast two-hybrid system. Mol. Cells 8, 122-126.
20. Lin L, Shi Y, Luo Z, Lu Y, Zheng H, Yan F, Chen J, Chen J, Adams MJ, Wu Y. (2009) Protein-protein interactions in two potyviruses using the yeast two-hybrid system. Virus Res. 142, 36-40.
21. Lu YW, Shen WT, Zhou P, Tang QJ, Niu YM, Peng M, Xiong Z. (2008) Complete genomic sequence of a Papaya ringspot virus isolate from Hainan Island,China. Arch. Virol. 153, 991-993.
22. Mangrauthia SK, Parameswari B, Jain RK, Praveen S. (2008) Role of genetic recombination in the molecular architecture of Papaya ringspot virus. Biochem. Genet. 46, 835-846.
23. Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KL, Salzberg SL, Feng L, Jones MR, Skelton RL, Murray JE, Chen C, Qian W, Shen J, Du P, Eustice M, Tong E, Tang H, Lyons E, Paull RE, Michael TP, Wall K, Rice DW, Albert H, Wang ML, Zhu YJ, Schatz M, Nagarajan N, Acob RA, Guan P, Blas A, Wai CM, Ackerman CM, Ren Y, Liu C, Wang J, Wang J, Na JK, Shakirov EV, Haas B, Thimmapuram J, Nelson D, Wang X, Bowers JE, Gschwend AR, Delcher AL, Singh R, Suzuki JY, Tripathi S, Neupane K, Wei H, Irikura B, Paidi M, Jiang N, Zhang W, Presting G, Windsor A, Navajas-Pérez R, Torres MJ, Feltus FA, Porter B, Li Y, Burroughs AM, Luo MC, Liu L, Christopher DA, Mount SM, Moore PH, Sugimura T, Jiang J, Schuler MA, Friedman V, Mitchell-Olds T, Shippen DE, dePamphilis CW, Palmer JD, Freeling M, Paterson AH, Gonsalves D, Wang L, Alam M. (2008) The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus) Nature 452, 991-996.
24. Plisson C, Drucker M, Blanc S, German-Retana S, Le Gall O, Thomas D, Bron P. (2003) Structural characterization of HCPro, a plant virus multifunctional protein. J. Biol. Chem. 278, 23753-23761.
25. Purcifull DE, Edwardson J, Hiebert EL, Gonsalves D. (1984) Papaya ringspot virus. CMI/AAB Descr. PL. Viruses 292, 8.
26. Roudet-Tavert G, German-Retana S, Delaunay T, Delécolle B, Candresse T, Le Gall O. (2002):Interaction between potyvirus helper component-proteinase and capsid protein in infected plants. J. Gen. Virol. 83, 1765-1770.
27. Roy G, Jain RK, Bhat AI, Varma A. (1999) Comparative host range and serological studies of Papaya ringspot potyvirus isolates. Indian Phytopath. 2, 14-17.
28. Suter B, Kittanakom S, Stagljar I. (2008) Two-hybrid technologies in proteomics research. Curr. Opin. Biotechnol. 19, 316-323.
29. Tecson Mendoza EM, C Laurena A, Botella JR. (2008) Recent advances in the development of transgenic papaya technology. Biotechnol. Annu. Rev. 14, 423-462.
30. Tripathi S, Suzuki JY, Ferreira SA, Gonsalves D. (2008) Papaya ringspot virus-P characteristics, pathogenicity, sequence variability and control. Mol. Plant Pathol. 9, 269-280.
31. Uetz P, Rajagopala SV, Dong YA, Haas J. (2004) From ORFeomes to protein interaction maps in viruses. Genome Res. 14, 2029-2033. oi:10.1101/gr.2583304.
32. Urcuqui-Inchima S, Walter J, Drugeon G, German-Retana S, Haenni AL, Candresse T, Bernardi F, Le Gall O. (1999) Potyvirus helper component-proteinase self-interaction in the yeast two-hybrid system and delineation of the interaction domain involved. Virology 258, 95-99.
33. Urcuqui-Inchima S, Haenni AL, Bernardi F. (2001) Potyvirus proteins a wealth of functions. Virus Res. 74, 157-175.
34. Whitham SA, Yang C, Goodin MM. (2006) Global impact elucidating plant responses to viral infection. Mol. Plant Microbe Interact. 19, 1207-1215.
35. Wittmann S, Chatel H, Fortin MG, Laliberté JF. (1997) Interaction of the viral protein genome linked of turnip mosaic potyvirus with the translational eukaryotic initiation factor (iso) 4E of Arabidopsis thaliana using the yeast two-hybrid system. Virology 234, 84-92.
36. Yambao ML, Masuta C, Nakahara K, Uyeda I. (2003) The central and C-terminal domains of VPg of Clover yellow vein virus are important for VPg-HCPro and VPg-VPg interactions. J. Gen. Virol. 84, 2861-2869.
37. Yeh SD, Jan FJ, Chiang CH, Doong TJ, Chen MC, Chung PH, Bau HJ. (1992) Complete nucleotide sequence and genetic organization of Papaya ringspot virus RNA. J. Gen. Virol. 73, 2531-2541. doi:10.1099/0022-1317-73-10-2531.