Identification and expression analysis of genes involved in early ovary development in diploid gynogenetic hybrids of red crucian carp × common carp

Marine Biotechnology

Volumn 12, Issue 2, 2010, Pages 186-194

  Liu, Dong ^a   Liu, Shaojun ^a   You, Cuiping ^a   Chen, Lin ^a   Liu, Zhen ^a   Liu, Liangguo ^a   Wang, Jing ^a   Liu, Yun ^a  

^a HUNAN NORMAL UNIVERSITY   (China)

Author keywords

Diploid egg; Gene expression; Gynogenesis; Ovary development; Suppression subtractive hybridization

Indexed keywords

ALLOTETRAPLOID HYBRIDS; ATP-BINDING CASSETTE TRANSPORTERS; CDNA CLONES; COMMON CARP; DOT-BLOT HYBRIDIZATION; ENCODED PROTEINS; EXPRESSION ANALYSIS; EXPRESSION PROFILE; GLUCANASE; GROWTH PHASE; GYNOGENESIS; MOLECULAR MECHANISM; QUANTITATIVE REAL-TIME POLYMERASE CHAIN REACTION; RED CRUCIAN CARP; REVERSE TRANSCRIPTASE- POLYMERASE CHAIN REACTION; SEQUENCING ANALYSIS; SIGNAL RECOGNITION PARTICLES; SUPPRESSION SUBTRACTIVE HYBRIDIZATION; TIME COURSE; TIME POINTS; XYLANASE FUSION PROTEINS;

DISASTER PREVENTION; GROWTH KINETICS; POLYMERASE CHAIN REACTION; POLYMERIZATION; PROTEINS; SIGNAL PROCESSING;

GENE EXPRESSION;

PRIMER DNA;

CHROMOSOME; CYPRINID; GENE EXPRESSION; GENETIC ENGINEERING; HYBRID; POLYMERASE CHAIN REACTION; REPRODUCTIVE BIOLOGY;

ANIMAL; ARTICLE; BIOLOGY; CARP; CYTOLOGY; DIPLOIDY; DNA SEQUENCE; FEMALE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE LIBRARY; GENETICS; HYBRIDIZATION; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; OVARY; PRENATAL DEVELOPMENT; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY;

ANIMALS; BASE SEQUENCE; CARPS; COMPUTATIONAL BIOLOGY; DIPLOIDY; DNA PRIMERS; FEMALE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE LIBRARY; HYBRIDIZATION, GENETIC; MOLECULAR SEQUENCE DATA; OVARY; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY;

CARASSIUS; CYPRINIDAE; CYPRINUS CARPIO;

EID: 77952291683     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-009-9212-3     Document Type: Article

References (36)

1. Auslander M, Yudkovski Y, Chalifa-Caspi V, Herut B, Ophir R, Reinhardt R, Neumann PM, Tom M (2008) Pollution-affected fish hepatic transcriptome and its expression patterns on exposure to cadmium. Mar Biotechnol 10: 250-261.
2. Cho HK, Nam BH, Kong HJ, Han HS, Hur YB, Choi TJ, Choi YH, Kim WJ, Cheong J (2008) Identification of softness syndrome-associated candidate genes and DNA sequence variation in the sea squirt, Halocynthia roretzi. Mar Biotechnol 10: 447-456.
3. Christine OI, Holland B, Schmitt L (2006) The motor domains of ABC-transporters, what can structures tell us? Naunyn-Schmiedeberg's Arch Pharmacol 372: 385-399.
4. Darias MJ, Zambonino-Infante JL, Hugot K, Cahu CL, Mazurais D (2008) Gene expression patterns during the larval development of European sea bass (dicentrarchus labrax) by microarray analysis. Mar Biotechnol 10: 416-428.
5. Diatchenko L, Lau YFC, Campbell AP, Chenchik A, Moqadam F, Huang B, Lukyanov S, Lukyanov K, Gurskaya N, Sverdlov ED, Siebert PD (1996) Suppression subtractive hybridization: a method for generating differentially regulated or tissue-specific cDNA probes and blibraries. Proc Natl Acad Sci U S A 93: 6025-6030.
6. Enoch T, Nurse P (1991) Coupling M phase and S phase: controls maintaining the dependence of mitosis on chromosome replication. Cell 65: 921-923.
7. Fagutao FF, Yasuike M, Caipang CM, Kondo H, Hirono I, Takahashi Y, Aoki T (2008) Gene expression profile of hemocytes of kuruma shrimp, Marsupenaeus japonicas following peptidoglycan stimulation. Mar Biotechnol 10: 731-740.
8. Gottesman MM, Ambudkar SV (2001) Overview: ABC transporters and human disease. J Bioenerg Biomembr 33: 453-458.
9. Kato S, Kosaka T, Watanabe K (2008) Comparative transcriptome analysis of responses of Methanothermobacter thermautotrophicus to different environmental stimuli. Environ Microbiol 10: 893-905.
10. Kovalskaya ON, Sergiev PV, Bogdanov AA, Dontsova OA (2006) Does a deficiency of the signal recognition particle (SRP) pathway affect the biosynthesis of its components in Saccharomyces cerevisiae and Escherichia coli? Biochemistry (Moscow) 71: 723-729.
11. Li P, Nijhawan D, Bidojardkp I, Srinivasula SM, Ahmad M, Alnemri ES, Wang X (1997) Cytochrome C and dATP-dependent formation of Apaf-1/caspase-9 complex initiates an apoptotic protease cascade. Cell 91: 479-489.
12. Liu Y (1993) Propagation physiology of main cultivated fish in China. Agricultural Publishing House, Beijing, pp 22-29.
13. Liu Y, Zhou GJ (1986) Cytological study on the gonadal development of F1 hybrids produced by crossing Carassius auratus (♀) with Cyprinus carpio (♂). Acta Hydrobiol Sin 10: 101-108.
14. Liu SJ, Liu Y, Zhou GJ, Zhang XJ, Luo S, Feng H, He XX, Zhu GH, Yang H (2001) The formation of tetraploid stocks of red crucian carp × common carp hybrids as an effect of interspecific hybridization. Aquaculture 192: 171-186.
15. Liu SJ, Sun YD, Zhang C, Luo KK, Liu Y (2004) Production of gynogenetic progeny from allotetraploid hybrids red crucian carp × common carp. Aquaculture 236: 193-200.
16. Liu LG, Tao M, Duan W, Liu SJ, Liu D, Liu Y (2007a) Cloning and genetic analysis of cyclin B gene in allotetraploids and their original parents. J Biochem Mol Bio 23: 849-858.
17. Liu SJ, Duan W, Tao M, Zhang C, Sun YD, Shen JM, Wang J, Luo KK, Liu Y (2007b) Establishment of the diploid gynogenetic hybrid clonal line of red crucian carp × common carp. Sci China C Life Sci 50: 186-193.
18. Livark KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2[-delta delta C(T)] method. Methods 25(4): 402-408.
19. Lundgren K, Walworth N, Booher R, Dembski M, Kirschner M, Beach D (1991) Mikl and wee1 cooperate in the inhibitory tyrosine phosphorylation of cdc2. Cell 64: 1111-1122.
20. Marchand J, Tanguy A, Charrier G, Quiniou L, Plee-Gauthier E, Laroche J (2006) Molecular identification and expression of differentially regulated genes of the European flounder, Platichthys flesus, submitted to pesticide exposure. Mar Biotechnol 8: 275-294.
21. Moya A, Tambutté S, Béranger G, Gaume B, Scimeca JC, Allemand D, Zoccola D (2008) Cloning and use of a coral 36B4 gene to study the differential expression of coral genes between light and dark conditions. Mar Biotechnol 10: 653-663.
22. Reusch TB, Veron AS, Preuss C, Weiner J, Wissler L, Beck A, Klages S, Kube M, Reinhardt R, Bornberg-Bauer E (2008) Comparative analysis of expressed sequence tag(EST) libraries in the seagrass Zostera marina subjected to temperature stress. Mar Biotechnol 10: 297-309.
23. Schünemann D (2004) Structure and function of the chloroplast signal recognition particle. Curr Genet 44: 295-304.
24. Shen JM, Liu SJ, Shun YD, Zhang C, Luo KK, Tao M, Zeng C, Liu Y (2006) A new type of triploid crucian carp-red crucian carp (♀) X allotetroploid (♂). Prog Nat Sci 16: 1348-1352.
25. Su JY, Maller JL (1995) Cloning and expression of a Xenopus gene that prevents, mitotic catastrophe in fission yeast. Mol Gen Genet 246: 387-396.
26. Sun YD, Liu SJ, Zhang C, Li JZ, Huang WR, Zhang J, Luo KK, Zhou GJ, Liu Y (2003) The chromosome number and gonadal structure of F9-F11 allotetraploid crucian-carp. Acta Genet Sin 30: 414-418.
27. Tsoi SCM, Ewart KV, Penny S, Melville K, Liebscher RS, Brown LL, Douglas SE (2004) Identification of immune-relevant genes from Atlantic Salmon using suppression subtractive hybridization. Mar Biotechnol 6: 199-214.
28. Wang B, Li F, Dong B, Zhang X, Zhang C, Xiang J (2006) Discovery of the genes in response to white spot syndrome virus (WSSV) infection in Fenneropenaeus chinensis through cDNA microarray. Mar Biotechnol 8: 491-500.
29. Wang B, Li F, Luan W, Xie Y, Zhang C, Luo Z, Gui L, Yan H, Xiang J (2008) Comparison of gene expression profiles of Fenneropenaeus chinensis challenged with WSSV and Vibrio. Mar Biotechnol 10: 664-675.
30. Wong QW, Mak WY, Chu KH (2008) Differential gene expression in hepatopancreas of the shrimp Metapenaeus ensis during ovarian maturation. Mar Biotechnol 10: 91-98.
31. Wynne JW, O'Sullivan MG, Cook MT, Stone G, Nowak BF, Lovell DR, Elliott NG (2008) Transcriptome analyses of amoebic gill disease- affected Atlantic salmon (Salmo salar) tissues reveal localized host gene suppression. Mar Biotechnol 10: 388-403.
32. Xie J, Wen JJ, Chen B, Gui JF (2001) Differential gene expression in fully-grown oocytes between gynogenetic and gonochoristic crucian carps. Gene 271: 109-116.
33. Yan JP, Liu SJ, Sun YD, Zhang C, Liu Y (2005) RAPD analysis of diploid gynogen populations of allotetraploid hybrids of red crucian carp (♀) × common carp (♂). Acta Hydrobiol Sin 29: 259-265.
34. Zeng C, Tao M, Liu SJ, Liu Y (2006) Comparative analysis of transcriptional level in ovaries with different ploidy level. J Nat Sci Hunan Normal Univ 29: 73-76.
35. Zhang YB, Shi YH, Gui JF (2003) Construction of antiviral subtractive cDNA library of cultured fish cells. Acta Hydrobiol Sin 27: 113-118.
36. Zhang C, Sun YD, Liu SJ, Liu Y (2005) Evidence of the unreduced diploid eggs generated from the diploid gynogenetic progeny of allotetraploid hybrids. Acta Genet Sin 32: 136-144.