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Volumn 23, Issue 2, 2010, Pages 119-132

Discerning tumor status from unstructured MRI reports-completeness of information in existing reports and utility of automated natural language processing

Author keywords

Natural language processing; Radiology reports; Structured; Tumor status; Unstructured

Indexed keywords

BRAIN TUMORS; CLASSIFICATION ,; CLINICAL DATA; DATA EXTRACTION; DATA RETRIEVAL; DISEASE DETECTION; DISEASE PROGRESSION; ELECTRONIC DATABASE; ELECTRONIC MEDICAL RECORD; GOLD STANDARDS; HUMAN TUMORS; NATURAL LANGUAGE PROCESSING; NEGATIVE PREDICTIVE VALUE; NLP TOOLS; NOVEL APPLICATIONS; POSITIVE PREDICTIVE VALUES; RADIOLOGY REPORTS; RULE BASED; STATUS DETERMINATION; TERTIARY CENTERS; TEXT FORMAT; TUMOR SIZE;

EID: 77952241648     PISSN: 08971889     EISSN: 1618727X     Source Type: Journal    
DOI: 10.1007/s10278-009-9215-7     Document Type: Article
Times cited : (72)

References (37)
  • 3
    • 50649122567 scopus 로고    scopus 로고
    • Extracting information from textual documents in the electronic health record: A review of recent research
    • Meystre SM, Savova GK, Kipper-Schuler KC, Hurdle JF: Extracting information from textual documents in the electronic health record: a review of recent research. Yearb Med Inform, pp 128-144, 2008
    • (2008) Yearb Med Inform , pp. 128-144
    • Meystre, S.M.1    Savova, G.K.2    Kipper-Schuler, K.C.3    Hurdle, J.F.4
  • 4
    • 0028955263 scopus 로고
    • Unlocking clinical data from narrative reports: A study of natural language processing
    • 1:STN:280:DyaK2M3hs1Oqug%3D%3D 7702231
    • G Hripcsak C Friedman PO Alderson W DuMouchel SB Johnson PD Clayton 1995 Unlocking clinical data from narrative reports: a study of natural language processing Ann Intern Med 122 9 681 688 1:STN:280:DyaK2M3hs1Oqug%3D%3D 7702231
    • (1995) Ann Intern Med , vol.122 , Issue.9 , pp. 681-688
    • Hripcsak, G.1    Friedman, C.2    Alderson, P.O.3    Dumouchel, W.4    Johnson, S.B.5    Clayton, P.D.6
  • 6
    • 0034054634 scopus 로고    scopus 로고
    • Coding neuroradiology reports for the Northern Manhattan Stroke Study: A comparison of natural language processing and manual review
    • DOI 10.1006/cbmr.1999.1535
    • JS Elkins C Friedman B Boden-Albala RL Sacco G Hripcsak 2000 Coding neuroradiology reports for the Northern Manhattan Stroke Study: a comparison of natural language processing and manual review Comput Biomed Res 33 1 1 10 10.1006/cbmr.1999.1535 1:STN:280:DC%2BD3c3jslGisg%3D%3D 10772780 (Pubitemid 30224831)
    • (2000) Computers and Biomedical Research , vol.33 , Issue.1 , pp. 1-10
    • Elkins, J.S.1    Friedman, C.2    Boden-Albala, B.3    Sacco, R.L.4    Hripcsak, G.5
  • 7
    • 21544453050 scopus 로고    scopus 로고
    • Automated detection of adverse events using natural language processing of discharge summaries
    • DOI 10.1197/jamia.M1794, PII S1067502705000514
    • GB Melton G Hripcsak 2005 Automated detection of adverse events using natural language processing of discharge summaries J Am Med Inform Assoc 12 4 448 457 10.1197/jamia.M1794 15802475 (Pubitemid 40922906)
    • (2005) Journal of the American Medical Informatics Association , vol.12 , Issue.4 , pp. 448-457
    • Melton, G.B.1    Hripcsak, G.2
  • 8
    • 12344287992 scopus 로고    scopus 로고
    • Application of recently developed computer algorithm for automatic classification of unstructured radiology reports: Validation study
    • DOI 10.1148/radiol.2341040049
    • KJ Dreyer MK Kalra MM Maher AM Hurier BA Asfaw T Schultz EF Halpern JH Thrall 2005 Application of recently developed computer algorithm for automatic classification of unstructured radiology reports: validation study Radiology 234 2 323 329 10.1148/radiol.2341040049 15591435 (Pubitemid 40139895)
    • (2005) Radiology , vol.234 , Issue.2 , pp. 323-329
    • Dreyer, K.J.1    Kalra, M.K.2    Maher, M.M.3    Hurier, A.M.4    Asfaw, B.A.5    Schultz, T.6    Halpern, E.F.7    Thrall, J.H.8
  • 10
    • 34047137897 scopus 로고    scopus 로고
    • Classification of cancer stage from free-text histology reports
    • 10.1109/IEMBS.2006.4398614 17945879
    • I McCowan D Moore MJ Fry 2006 Classification of cancer stage from free-text histology reports Conf Proc IEEE Eng Med Biol Soc 1 5153 5156 10.1109/IEMBS.2006.4398614 17945879
    • (2006) Conf Proc IEEE Eng Med Biol Soc , vol.1 , pp. 5153-5156
    • McCowan, I.1    Moore, D.2    Fry, M.J.3
  • 11
    • 34250895016 scopus 로고    scopus 로고
    • Electronic medical records for clinical research: Application to the identification of heart failure
    • 17567225
    • S Pakhomov SA Weston SJ Jacobsen CG Chute R Meverden VL Roger 2007 Electronic medical records for clinical research: application to the identification of heart failure Am J Manag Care 13 6 Part 1 281 288 17567225
    • (2007) Am J Manag Care , vol.13 , Issue.6 PART 1 , pp. 281-288
    • Pakhomov, S.1    Weston, S.A.2    Jacobsen, S.J.3    Chute, C.G.4    Meverden, R.5    Roger, V.L.6
  • 13
    • 62749158308 scopus 로고    scopus 로고
    • Identifying QT prolongation from ECG impressions using a general-purpose natural language processor
    • 10.1016/j.ijmedinf.2008.09.001 18938105
    • JC Denny RA Miller LR Waitman MA Arrieta JF Peterson 2009 Identifying QT prolongation from ECG impressions using a general-purpose natural language processor Int J Med Inform 78 S34 S42 10.1016/j.ijmedinf.2008.09.001 18938105
    • (2009) Int J Med Inform , vol.78
    • Denny, J.C.1    Miller, R.A.2    Waitman, L.R.3    Arrieta, M.A.4    Peterson, J.F.5
  • 14
    • 0035220275 scopus 로고    scopus 로고
    • Automatic structuring of radiology free-text reports
    • 1:STN:280:DC%2BD3MzgtFCjug%3D%3D 11158658
    • RK Taira SG Soderland RM Jakobovits 2001 Automatic structuring of radiology free-text reports Radiographics 21 1 237 245 1:STN:280: DC%2BD3MzgtFCjug%3D%3D 11158658
    • (2001) Radiographics , vol.21 , Issue.1 , pp. 237-245
    • Taira, R.K.1    Soderland, S.G.2    Jakobovits, R.M.3
  • 15
    • 0036082141 scopus 로고    scopus 로고
    • Use of natural language processing to translate clinical information from a database of 889,921 chest radiographic reports
    • 10.1148/radiol.2241011118 12091676
    • G Hripcsak JH Austin PO Alderson C Friedman 2002 Use of natural language processing to translate clinical information from a database of 889,921 chest radiographic reports Radiology 224 1 157 163 10.1148/radiol.2241011118 12091676
    • (2002) Radiology , vol.224 , Issue.1 , pp. 157-163
    • Hripcsak, G.1    Austin, J.H.2    Alderson, P.O.3    Friedman, C.4
  • 16
    • 1542369996 scopus 로고    scopus 로고
    • Available at
    • The Porter stemming algorithm. Available at http://tartarus.org/~martin/ PorterStemmer/. Accessed 1 Nov 2008
    • The Porter Stemming Algorithm
  • 17
    • 34249753618 scopus 로고
    • Support-vector networks
    • C Cortes V Vapnik 1995 Support-vector networks Mach Learn 20 273 297
    • (1995) Mach Learn , vol.20 , pp. 273-297
    • Cortes, C.1    Vapnik, V.2
  • 19
    • 84864167979 scopus 로고    scopus 로고
    • LIBSVM-A library for support vector machines
    • LIBSVM-A library for support vector machines. Available at http://www.csie.ntu.edu.tw/~cjlin/libsvm/. Accessed 3 Nov 2008
  • 21
    • 0034074819 scopus 로고    scopus 로고
    • Pitfalls of the vague radiology report
    • 1:STN:280:DC%2BD3czgt1SrsA%3D%3D 10845472
    • L Berlin 2000 Pitfalls of the vague radiology report AJR Am J Roentgenol 174 6 1511 1518 1:STN:280:DC%2BD3czgt1SrsA%3D%3D 10845472
    • (2000) AJR Am J Roentgenol , vol.174 , Issue.6 , pp. 1511-1518
    • Berlin, L.1
  • 22
    • 0033809421 scopus 로고    scopus 로고
    • Communication of doubt and certainty in radiological reports
    • 1:STN:280:DC%2BD3crhtFShtw%3D%3D 11064655
    • JL Hobby BD Tom C Todd PW Bearcroft AK Dixon 2000 Communication of doubt and certainty in radiological reports Br J Radiol 73 873 999 1001 1:STN:280:DC%2BD3crhtFShtw%3D%3D 11064655
    • (2000) Br J Radiol , vol.73 , Issue.873 , pp. 999-1001
    • Hobby, J.L.1    Tom, B.D.2    Todd, C.3    Bearcroft, P.W.4    Dixon, A.K.5
  • 23
    • 0000718237 scopus 로고
    • Standardization of Roentgen-Ray Reports
    • PM Hickey 1922 Standardization of Roentgen-Ray Reports Am J Roentgenol 9 442 445
    • (1922) Am J Roentgenol , vol.9 , pp. 442-445
    • Hickey, P.M.1
  • 24
    • 0035115696 scopus 로고    scopus 로고
    • Radiology reports: Examining radiologist and clinician preferences regarding style and content
    • 1:STN:280:DC%2BD3M3is1KlsQ%3D%3D 11222186
    • SS Naik A Hanbidge SR Wilson 2001 Radiology reports: examining radiologist and clinician preferences regarding style and content AJR Am J Roentgenol 176 3 591 598 1:STN:280:DC%2BD3M3is1KlsQ%3D%3D 11222186
    • (2001) AJR Am J Roentgenol , vol.176 , Issue.3 , pp. 591-598
    • Naik, S.S.1    Hanbidge, A.2    Wilson, S.R.3
  • 25
    • 42949163881 scopus 로고    scopus 로고
    • The radiology report of the future: A summary of the 2007 intersociety conference
    • DOI 10.1016/j.jacr.2007.12.015, PII S1546144007007661
    • NR Dunnick CP Langlotz 2008 The radiology report of the future: a summary of the 2007 Intersociety Conference J Am Coll Radiol 5 5 626 629 10.1016/j.jacr.2007.12.015 18442766 (Pubitemid 351608361)
    • (2008) JACR Journal of the American College of Radiology , vol.5 , Issue.5 , pp. 626-629
    • Dunnick, N.R.1    Langlotz, C.P.2
  • 26
    • 34247386754 scopus 로고    scopus 로고
    • Radiology reporting, past, present, and future: The radiologist's perspective
    • DOI 10.1016/j.jacr.2007.01.015, PII S1546144007000270
    • BI Reiner N Knight EL Siegel 2007 Radiology reporting, past, present, and future: the radiologist's perspective J Am Coll Radiol 4 5 313 319 10.1016/j.jacr.2007.01.015 17467614 (Pubitemid 46636407)
    • (2007) JACR Journal of the American College of Radiology , vol.4 , Issue.5 , pp. 313-319
    • Reiner, B.I.1    Knight, N.2    Siegel, E.L.3
  • 28
    • 0038012834 scopus 로고    scopus 로고
    • Is terminology used effectively to convey diagnostic certainty in radiology reports?
    • DOI 10.1016/S1076-6332(03)80089-2
    • R Khorasani DW Bates S Teeger JM Rothschild DF Adams SE Seltzer 2003 Is terminology used effectively to convey diagnostic certainty in radiology reports Acad Radiol 10 6 685 688 10.1016/S1076-6332(03)80089-2 12809424 (Pubitemid 36628918)
    • (2003) Academic Radiology , vol.10 , Issue.6 , pp. 685-688
    • Khorasani, R.1    Bates, D.W.2    Teeger, S.3    Rothschild, J.M.4    Adams, D.F.5    Seltzer, S.E.6
  • 29
    • 34250311582 scopus 로고    scopus 로고
    • RadLex: A new method for indexing online educational materials
    • 10.1148/rg.266065168 17102038
    • CP Langlotz 2006 RadLex: a new method for indexing online educational materials Radiographics 26 6 1595 1597 10.1148/rg.266065168 17102038
    • (2006) Radiographics , vol.26 , Issue.6 , pp. 1595-1597
    • Langlotz, C.P.1
  • 30
    • 0019365237 scopus 로고
    • Reporting results of cancer treatment
    • DOI 10.1002/1097-0142(19810101)47:1<207::AID-CNCR2820470134>3.0. CO;2-6
    • AB Miller B Hoogstraten M Staquet A Winkler 1981 Reporting results of cancer treatment Cancer 47 1 207 214 10.1002/1097-0142(19810101)47:1<207:: AID-CNCR2820470134>3.0.CO;2-6 1:STN:280:DyaL3M7htFOltw%3D%3D 7459811 (Pubitemid 11167383)
    • (1981) Cancer , vol.47 , Issue.1 , pp. 207-214
    • Miller, A.B.1    Hoogstraten, B.2    Staquet, M.3    Winkler, A.4
  • 31
    • 0034594628 scopus 로고    scopus 로고
    • New guidelines to evaluate the response to treatment in solid tumors. European Organization for Research and Treatment of Cancer, National Cancer Institute of the United States, National Cancer Institute of Canada
    • 10.1093/jnci/92.3.205 1:STN:280:DC%2BD3c7it1Gitg%3D%3D 10655437
    • P Therasse SG Arbuck EA Eisenhauer J Wanders RS Kaplan L Rubinstein J Verweij M Van Glabbeke AT van Oosterom MC Christian SG Gwyther 2000 New guidelines to evaluate the response to treatment in solid tumors. European Organization for Research and Treatment of Cancer, National Cancer Institute of the United States, National Cancer Institute of Canada J Natl Cancer Inst 92 3 205 216 10.1093/jnci/92.3.205 1:STN:280:DC%2BD3c7it1Gitg%3D%3D 10655437
    • (2000) J Natl Cancer Inst , vol.92 , Issue.3 , pp. 205-216
    • Therasse, P.1    Arbuck, S.G.2    Eisenhauer, E.A.3    Wanders, J.4    Kaplan, R.S.5    Rubinstein, L.6    Verweij, J.7    Van Glabbeke, M.8    Van Oosterom, A.T.9    Christian, M.C.10    Gwyther, S.G.11
  • 32
    • 33744491005 scopus 로고    scopus 로고
    • Validation of neuroradiologic response assessment in gliomas: Measurement by RECIST, two-dimensional, computer-assisted tumor area, and computer-assisted tumor volume methods
    • DOI 10.1215/15228517-2005-005
    • E Galanis JC Buckner MJ Maurer R Sykora R Castillo KV Ballman BJ Erickson 2006 Validation of neuroradiologic response assessment in gliomas: measurement by RECIST, two-dimensional, computer-assisted tumor area, and computer-assisted tumor volume methods Neuro Oncol 8 2 156 165 10.1215/15228517-2005-005 16533757 (Pubitemid 46542660)
    • (2006) Neuro-Oncology , vol.8 , Issue.2 , pp. 156-165
    • Galanis, E.1    Buckner, J.C.2    Maurer, M.J.3    Sykora, R.4    Castillo, R.5    Ballman, K.V.6    Erickson, B.J.7
  • 33
    • 33847640080 scopus 로고    scopus 로고
    • Temporal reasoning with medical data-A review with emphasis on medical natural language processing
    • DOI 10.1016/j.jbi.2006.12.009, PII S1532046407000032
    • L Zhou G Hripcsak 2007 Temporal reasoning with medical data-a review with emphasis on medical natural language processing J Biomed Inform 40 2 183 202 10.1016/j.jbi.2006.12.009 17317332 (Pubitemid 46357045)
    • (2007) Journal of Biomedical Informatics , vol.40 , Issue.2 , pp. 183-202
    • Zhou, L.1    Hripcsak, G.2
  • 34
    • 84957069814 scopus 로고    scopus 로고
    • Text categorization with support vector machines: Learning with many relevant features
    • Berlin: Springer
    • Joachims T: Text Categorization with Support Vector Machines: Learning with Many Relevant Features. In: Lecture Notes in Computer Science. Berlin: Springer, 1998, pp 137-142
    • (1998) Lecture Notes in Computer Science , pp. 137-142
    • Joachims, T.1
  • 36
    • 0036161029 scopus 로고    scopus 로고
    • Support vector machines for classification in nonstandard situations
    • DOI 10.1023/A:1012406528296
    • Y Lin Y Lee G Wahba 2002 Support vector machines for classification in nonstandard situations Mach Learn 46 191 202 10.1023/A:1012406528296 (Pubitemid 34129968)
    • (2002) Machine Learning , vol.46 , Issue.1-3 , pp. 191-202
    • Lin, Y.1    Lee, Y.2    Wahba, G.3


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