메뉴 건너뛰기




Volumn 5997 LNCS, Issue , 2010, Pages 294-303

An experimental comparison of hierarchical Bayes and true path rule ensembles for protein function prediction

Author keywords

[No Author keywords available]

Indexed keywords

ECONOMIC AND SOCIAL EFFECTS; GENES; PROTEINS;

EID: 77952043595     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-12127-2_30     Document Type: Conference Paper
Times cited : (3)

References (19)
  • 1
    • 33748776559 scopus 로고    scopus 로고
    • Automated protein function prediction-the genomic challenge
    • Friedberg, I.: Automated protein function prediction-the genomic challenge. Brief. Bioinformatics 7, 225-242 (2006)
    • (2006) Brief. Bioinformatics , vol.7 , pp. 225-242
    • Friedberg, I.1
  • 2
    • 47549116997 scopus 로고    scopus 로고
    • A critical assessment of Mus musculus gene function prediction using integrated genomic evidence
    • Pena-Castillo, L., et al.: A critical assessment of Mus musculus gene function prediction using integrated genomic evidence. Genome Biology 9(S1) (2008)
    • (2008) Genome Biology , vol.9 , Issue.S1
    • Pena-Castillo, L.1
  • 3
    • 47549108100 scopus 로고    scopus 로고
    • Predicting gene function in a hierarchical context with an ensemble of classifiers
    • DOI 10.1186/gb-2008-9-s1-s3
    • Guan, Y., Myers, C., Hess, D., Barutcuoglu, Z., Caudy, A., Troyanskaya, O.: Predicting gene function in a hierarchical context with an ensemble of classifiers. Genome Biology 9(S2) (2008) (Pubitemid 352006139)
    • (2008) Genome Biology , vol.9 , Issue.SUPPL. 1
    • Guan, Y.1    Myers, C.L.2    Hess, D.C.3    Barutcuoglu, Z.4    Caudy, A.A.5    Troyanskaya, O.G.6
  • 6
    • 47549088657 scopus 로고    scopus 로고
    • Consistent probabilistic outputs for protein function prediction
    • DOI 10.1186/gb-2008-9-s1-s6
    • Obozinski, G., Lanckriet, G., Grant, C., Jordan, M.I., Noble, W.S.: Consistent probabilistic output for protein function prediction. Genome Biology 9(S6) (2008) (Pubitemid 352006136)
    • (2008) Genome Biology , vol.9 , Issue.SUPPL. 1
    • Obozinski, G.1    Lanckriet, G.2    Grant, C.3    Jordan, M.I.4    Noble, W.S.5
  • 7
    • 51749110896 scopus 로고    scopus 로고
    • Integration of relational and hierarchical network information for protein function prediction
    • Jiang, X., Nariai, N., Steffen, M., Kasif, S., Kolaczyk, E.: Integration of relational and hierarchical network information for protein function prediction. BMC Bioinformatics 9(350) (2008)
    • (2008) BMC Bioinformatics , vol.9 , Issue.350
    • Jiang, X.1    Nariai, N.2    Steffen, M.3    Kasif, S.4    Kolaczyk, E.5
  • 8
    • 79952857163 scopus 로고    scopus 로고
    • Hierarchical cost-sensitive algorithms for genome-wide gene function prediction
    • W&C Proceedings (to appear)
    • Cesa-Bianchi, N., Valentini, G.: Hierarchical cost-sensitive algorithms for genome-wide gene function prediction. Journal of Machine Learning Research, W&C Proceedings (to appear)
    • Journal of Machine Learning Research
    • Cesa-Bianchi, N.1    Valentini, G.2
  • 9
    • 70349319699 scopus 로고    scopus 로고
    • True path rule hierarchical ensembles
    • Benediktsson, J.A., Kittler, J., Roli, F. (eds.) MCS 2009. Springer, Heidelberg
    • Valentini, G.: True path rule hierarchical ensembles. In: Benediktsson, J.A., Kittler, J., Roli, F. (eds.) MCS 2009. LNCS, vol. 5519, pp. 232-241. Springer, Heidelberg (2009)
    • (2009) LNCS , vol.5519 , pp. 232-241
    • Valentini, G.1
  • 11
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: Tool for the unification of biology
    • The Gene Ontology Consortium
    • The Gene Ontology Consortium: Gene ontology: tool for the unification of biology. Nature Genet. 25, 25-29 (2000)
    • (2000) Nature Genet , vol.25 , pp. 25-29
  • 14
    • 77952075250 scopus 로고    scopus 로고
    • Gene Ontology Consortium: True path rule (2009), http://www.geneontology. org/GO.usage.shtml#truePathRule
    • (2009) True Path Rule
  • 16
    • 77952069245 scopus 로고    scopus 로고
    • True Path Rule hierarchical ensembles for genome-wide gene function prediction
    • in press
    • Valentini, G.: True Path Rule hierarchical ensembles for genome-wide gene function prediction. IEEE ACM Trans. on Comp. Biol. and Bioinformatics (in press)
    • IEEE ACM Trans. on Comp. Biol. and Bioinformatics
    • Valentini, G.1
  • 17
    • 34548160247 scopus 로고    scopus 로고
    • A note on Platt's probabilistic outputs for support vector machines
    • DOI 10.1007/s10994-007-5018-6
    • Lin, H., Lin, C., Weng, R.: A note on Platt's probabilistic outputs for support vector machines. Machine Learning 68, 267-276 (2007) (Pubitemid 47312490)
    • (2007) Machine Learning , vol.68 , Issue.3 , pp. 267-276
    • Lin, H.-T.1    Lin, C.-J.2    Weng, R.C.3
  • 18
    • 33744499195 scopus 로고    scopus 로고
    • A categorization approach to automated ontological function annotation
    • DOI 10.1110/ps.062184006
    • Verspoor, K., Cohn, J., Mnizewski, S., Joslyn, C.: A categorization approach to automated ontological function annotation. Protein Science 15, 1544-1549 (2006) (Pubitemid 43800029)
    • (2006) Protein Science , vol.15 , Issue.6 , pp. 1544-1549
    • Verspoor, K.1    Cohn, J.2    Mniszewski, S.3    Joslyn, C.4
  • 19
    • 29644438050 scopus 로고    scopus 로고
    • Statistical comparisons of classifiers over multiple data sets
    • Demsar, J.: Statistical comparisons of classifiers over multiple data sets. Journal of Machine Learning Research 7, 1-30 (2006)
    • (2006) Journal of Machine Learning Research , vol.7 , pp. 1-30
    • Demsar, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.