Falling-edge, variable threshold (FEVT) method for the automated detection of gastric slow wave events in high-resolution serosal electrode recordings

Annals of Biomedical Engineering

Volumn 38, Issue 4, 2010, Pages 1511-1529

  Erickson, Jonathan C ^a,e   O'Grady, Gregory ^b   Du, Peng ^b   Obioha, Chibuike ^c   Qiao, Wenlian ^b   Richards, William O ^d   Bradshaw, L Alan ^a,c   Pullan, Andrew J ^b,c   Cheng, Leo K ^b  

^a VANDERBILT UNIVERSITY   (United States)

^b UNIVERSITY OF AUCKLAND   (New Zealand)

^c VANDERBILT UNIVERSITY MEDICAL CENTER   (United States)

^d UNIVERSITY OF SOUTH ALABAMA   (United States)

^e WASHINGTON AND LEE UNIVERSITY   (United States)

Author keywords

Activation time map; Energy operator; Gastric electrical activity; Gastric slow wave; High resolution mapping

Indexed keywords

ACTIVATION TIME; ACTIVATION TIME MAP; ENERGY OPERATORS; GASTRIC ELECTRICAL ACTIVITIES; GASTRIC SLOW WAVES; HIGH-RESOLUTION MAPPING;

AUTOMATION; MAPPING; OPTIMIZATION; SIGNAL TO NOISE RATIO;

SIGNAL DETECTION;

ALGORITHM; ANIMAL; ARTICLE; AUTOMATED PATTERN RECOGNITION; ELECTRODE; ELECTROMYOGRAPHY; EVALUATION; INSTRUMENTATION; METHODOLOGY; MIGRATING MYOELECTRIC COMPLEX; PHYSIOLOGY; SIGNAL PROCESSING; SMOOTH MUSCLE; STOMACH; SWINE;

ALGORITHMS; ANIMALS; ELECTRODES, IMPLANTED; ELECTROMYOGRAPHY; MUSCLE, SMOOTH; MYOELECTRIC COMPLEX, MIGRATING; PATTERN RECOGNITION, AUTOMATED; SIGNAL PROCESSING, COMPUTER-ASSISTED; STOMACH; SWINE;

EID: 77952010991     PISSN: 00906964     EISSN: 15739686     Source Type: Journal    
DOI: 10.1007/s10439-009-9870-3     Document Type: Article

References (32)

1. L. A. Bradshaw A. Irimia J. A. Sims M. R. Gallucci R. L. Palmer W. O. Richards 2006 Biomagnetic characterization of spatiotemporal parameters of the gastric slow wave Neurogastroenterol. Motil. 18 619 631 10.1111/j.1365-2982. 2006.00794.x 1:STN:280:DC%2BD28vps1aksQ%3D%3D 16918726 (Pubitemid 44079765)
2. J. Chen Z. Lin J. Pan R. McCallum 1996 Abnormal gastric myoelectrical activity and delayed gastric emptying in patients with symptoms suggestive of gastroparesis Dig. Dis. Sci. 41 1538 1545 10.1007/BF02087897 1:STN:280:DyaK28zlsVKgtg%3D%3D 8769276
3. Cheng, L. K., G. O'Grady, P. Du, J. U. Egbuji, J. A. Windsor, and A. J. Pullan. Gastrointestinal system. Wiley Interdiscip. Rev.: Syst. Biol. Med., 2009. doi: 10.1002/wsbm.19.
4. F. Crenner A. Lambert F. Angel J. Schang J. Grenier 1982 Analogue automated analysis of small intestinal electromyogram Med. Biol. Eng. Comput. 20 151 158 10.1007/BF02441350 1:STN:280:DyaL383ktlymug%3D%3D 7098571
5. P. Du G. O'Grady J. U. Egbuji W. J. Lammers D. Budgett P. Nielsen J. A. W. A. J. Pullan L. K. Cheng 2009 High resolution mapping of in-vivo gastrointestinal slow wave activity using flexible printed circuit board electrodes: methods and validation Ann. Biomed. Eng. 37 839 846 10.1007/s10439-009-9654-9 19224368
6. P. Du G. O'Grady J. A. Windsor L. K. Cheng A. J. Pullan 2009 A tissue framework for simulating the effects of gastric electrical stimulation and in-vivo validation IEEE Trans. Biomed. Eng. 56 2755 2761 10.1109/TBME.2009. 2027690 19643697
7. P. Du W. Qiao G. O'Grady J. U. Egbuji W. Lammers L. K. Cheng A. J. Pullan 2009 Automated detection of gastric slow wave events and estimation of propagation velocity vector fields from serosal high-resolution mapping Conf. Proc. IEEE Eng. Med. Biol. Soc 1 2527 2530
8. P. I. Gardner P. C. Ursell J. J. Fenoglio A. L. Wit 1985 Electrophysiologic and anatomic basis for fractionated electrograms recorded from healed myocardial infarcts Circulation 72 596 611 1:STN:280: DyaL2M3lsFCgtQ%3D%3D 4017211
9. V. Hodge J. Austin 2004 A survey of outlier detection methodologies Artif. Intell. Rev. 22 85 126 10.1023/B:AIRE.0000045502.10941.a9
10. J. D. Huizinga W. J. Lammers 2009 Gut peristalsis is governed by a multitude of cooperating mechanisms Am. J. Physiol. Gastrointest. Liver Physiol. 296 1 8 10.1152/ajpgi.90380.2008
11. Kaiser, J. On a simple algorithm to calculate the energy of a signal. In: Proceedings of the IEEE International Conference on Acoustic Speech and Signal Processing, edited by Y. Smith, Albuquerque, April 1990, pp. 381-384.
12. Kaiser, J. Some useful properties of Teager's energy operators. In: 1993 IEEE International Conference on Acoustics, Speech, and Signal Processing, Vol. 3. ICASSP-93, 1993.
13. S. Kim J. McNames 2007 Automatic spike detection based on adaptive template matching for extracellular neural recordings J. Neurosci. Methods 165 165 174 10.1016/j.jneumeth.2007.05.033 17669507 (Pubitemid 47212454)
14. Kohler, B., C. Hennig, and R. Orglmeister. The principles of software QRS detection. In: IEEE Engineering in Medicine and Biology, Jan/Feb 2002, pp. 42-57.
15. Lammers, W. Smoothmap v3.0.3. http://www.Smoothmap.org.
16. W. J. Lammers B. Michiels J. Voeten L. Ver Donck J. A. Schuurkes 2008 Mapping slow waves and spikes in chronically instrumented conscious dogs: automated on-line electrogram analysis Med. Biol. Eng. Comput. 46 121 129 10.1007/s11517-007-0294-7 18200451
17. W. J. Lammers B. Stephen K. Arafat G. W. Manefield 1996 High resolution electrical mapping in the gastrointestinal system: initial results Neurogastroenterol. Motil. 8 207 216 1:STN:280:DyaK2s%2Fjt1Wrtg%3D%3D 8878080
18. W. J. Lammers L. Ver Donck B. Stephen D. Smets J. A. Schuurkes 2008 Focal activities and re-entrant propagations as mechanisms of gastric tachyarrhythmias Gastroenterology 135 1601 1611 10.1053/j.gastro.2008.07.020 18713627
19. W. J. Lammers L. Ver Donck B. Stephen D. Smets J. A. Schuurkes 2009 Origin and propagation of the slow wave in the canine stomach: the outlines of a gastric conduction system Am. J. Physiol. Gastrointest. Liver Physiol. 296 1200 1210 10.1152/ajpgi.90581.2008
20. M. Lewicki 1998 A review of methods for spike sorting: the detection and classification of neural action potentials Network: Comput. Neural Syst. 9 R53 R78 10.1088/0954-898X/9/4/001 1:STN:280:DyaK1M3js1Olsg%3D%3D
21. P. Maragos A. Potamianos 1995 Higher order differential energy operators IEEE Signal Process. Lett. 2 152 154 10.1109/97.404130
22. McAdams, E. Bioelectrodes. In: Encyclopedia of Medical Devices and Instrumentation (2nd ed.), edited by J. G. Webster. New York: Wiley, 2006, pp. 120-166.
23. S. Mukhopadhyay G. C. Ray 1998 A new interpretation of nonlinear energy operator and its efficacy in spike detection IEEE Trans. Biomed. Eng. 45 180 187 10.1109/10.661266 1:STN:280:DyaK1c7jsVWisg%3D%3D 9473841 (Pubitemid 28128237)
24. Z. Nenadic J. W. Burdick 2005 Spike detection using the continuous wavelet transform IEEE Trans. Biomed. Eng. 52 74 87 10.1109/TBME.2004.839800 15651566 (Pubitemid 40065611)
25. G. O'Grady P. Du J. Egbuji W. Lammers D. Budgett P. Nielsen J. Windsor A. Pullan L. Cheng 2009 High-resolution mapping of human gastric slow wave activity: methods and first results Gastroenterology 136 A484
26. G. O'Grady P. Du J. U. Egbuji, et al. 2009 A novel laparoscopic device for measuring gastrointestinal slow-wave activity Surg. Endosc. 23 2842 2848 10.1007/s00464-009-0515-2
27. J. Postaire N. Van Houtte G. Devroede 1979 A computer system for quantitative analysis of gastrointestinal signals Comput. Biol. Med. 9 295 10.1016/0010-4825(79)90036-2 1:STN:280:DyaL3c7jtlCmtQ%3D%3D 535356 (Pubitemid 10219262)
28. A. Pousse C. Mendel J. Vial J. Grenier 1978 Computer program for intestinal basic electrical rhythm patterns analysis Pflugers Arch. Eur. J. Physiol. 376 259 262 10.1007/BF00584960 1:STN:280:DyaE1M%2FjtlWjug%3D%3D
29. W. O. Richards C. L. Garrard S. H. Allos L. A. Bradshaw D. J. Staton J. P. Wikswo 1995 Noninvasive diagnosis of mesenteric ischemia using a SQUID magnetometer Ann. Surg. 221 696 704 10.1097/00000658-199506000-00009 1:STN:280:DyaK2MzhsVCiug%3D%3D 7794074
30. M. I. Sezan 1990 A peak detection algorithm and its application to histogram-based image data reduction Comput. Vis. Graph. Image Process. 49 36 51 10.1016/0734-189X(90)90161-N
31. Shenasa, M., G. Hindricks, M. Borggrefe, and G. Breithardt. Cardiac Mapping. Oxford, UK: Blackwell Publishing Ltd, 2009.
32. L. Ver Donck W. J. Lammers B. Moreaux D. Smets J. Voeten J. Vekemans J. A. Schuurkes B. Coulie 2006 Mapping slow waves and spikes in chronically instrumented conscious dogs: implantation techniques and recordings Med. Biol. Eng. Comput. 44 170 178 10.1007/s11517-005-0018-9 1:STN:280: DC%2BD28rht1ersw%3D%3D 16937158 (Pubitemid 43949712)