메뉴 건너뛰기




Volumn 8, Issue , 2010, Pages

A comparative genome analysis of gene expression reveals different regulatory mechanisms between mouse and human embryo pre-implantation development

Author keywords

[No Author keywords available]

Indexed keywords

RNA;

EID: 77951956038     PISSN: None     EISSN: 14777827     Source Type: Journal    
DOI: 10.1186/1477-7827-8-41     Document Type: Article
Times cited : (18)

References (41)
  • 1
    • 0037629003 scopus 로고    scopus 로고
    • Aspects of the molecular regulation of early mammalian development
    • Edwards RG. Aspects of the molecular regulation of early mammalian development. Reprod Biomed Online 2003, 6:97-113.
    • (2003) Reprod Biomed Online , vol.6 , pp. 97-113
    • Edwards, R.G.1
  • 2
    • 0347763875 scopus 로고    scopus 로고
    • Dynamics of global gene expression changes during mouse preimplantation development
    • 10.1016/S1534-5807(03)00373-3, 14723852
    • Hamatani T, Carter MG, Sharov AA, Ko MS. Dynamics of global gene expression changes during mouse preimplantation development. Dev Cell 2004, 6:117-131. 10.1016/S1534-5807(03)00373-3, 14723852.
    • (2004) Dev Cell , vol.6 , pp. 117-131
    • Hamatani, T.1    Carter, M.G.2    Sharov, A.A.3    Ko, M.S.4
  • 3
    • 0345872510 scopus 로고    scopus 로고
    • A genome-wide study of gene activity reveals developmental signaling pathways in the preimplantation mouse embryo
    • 10.1016/S1534-5807(03)00404-0, 14723853
    • Wang QT, Piotrowska K, Ciemerych MA, Milenkovic L, Scott MP, Davis RW, Zernicka-Goetz M. A genome-wide study of gene activity reveals developmental signaling pathways in the preimplantation mouse embryo. Dev Cell 2004, 6:133-144. 10.1016/S1534-5807(03)00404-0, 14723853.
    • (2004) Dev Cell , vol.6 , pp. 133-144
    • Wang, Q.T.1    Piotrowska, K.2    Ciemerych, M.A.3    Milenkovic, L.4    Scott, M.P.5    Davis, R.W.6    Zernicka-Goetz, M.7
  • 4
    • 0035092987 scopus 로고    scopus 로고
    • A mammalian oocyte-specific linker histone gene H1oo: homology with the genes for the oocyte-specific cleavage stage histone (cs-H1) of sea urchin and the B4/H1 M histone of the frog
    • Tanaka M, Hennebold JD, Macfarlane J, Adashi EY. A mammalian oocyte-specific linker histone gene H1oo: homology with the genes for the oocyte-specific cleavage stage histone (cs-H1) of sea urchin and the B4/H1 M histone of the frog. Development 2001, 128:655-664.
    • (2001) Development , vol.128 , pp. 655-664
    • Tanaka, M.1    Hennebold, J.D.2    Macfarlane, J.3    Adashi, E.Y.4
  • 5
    • 0034816865 scopus 로고    scopus 로고
    • Expression of MSY2 in mouse oocytes and preimplantation embryos
    • 10.1095/biolreprod65.4.1260, 11566752
    • Yu J, Hecht NB, Schultz RM. Expression of MSY2 in mouse oocytes and preimplantation embryos. Biol Reprod 2001, 65:1260-1270. 10.1095/biolreprod65.4.1260, 11566752.
    • (2001) Biol Reprod , vol.65 , pp. 1260-1270
    • Yu, J.1    Hecht, N.B.2    Schultz, R.M.3
  • 6
    • 18844416562 scopus 로고    scopus 로고
    • Requirement of the MAP kinase signaling pathways for mouse preimplantation development
    • 10.1242/dev.01729, 15772134
    • Maekawa M, Yamamoto T, Tanoue T, Yuasa Y, Chisaka O, Nishida E. Requirement of the MAP kinase signaling pathways for mouse preimplantation development. Development 2005, 132:1773-1783. 10.1242/dev.01729, 15772134.
    • (2005) Development , vol.132 , pp. 1773-1783
    • Maekawa, M.1    Yamamoto, T.2    Tanoue, T.3    Yuasa, Y.4    Chisaka, O.5    Nishida, E.6
  • 7
    • 1642310204 scopus 로고    scopus 로고
    • P38 MAPK signaling during murine preimplantation development
    • 10.1016/j.ydbio.2003.12.011, 15031106
    • Natale DR, Paliga AJ, Beier F, D'Souza SJ, Watson AJ. p38 MAPK signaling during murine preimplantation development. Dev Biol 2004, 268:76-88. 10.1016/j.ydbio.2003.12.011, 15031106.
    • (2004) Dev Biol , vol.268 , pp. 76-88
    • Natale, D.R.1    Paliga, A.J.2    Beier, F.3    D'Souza, S.J.4    Watson, A.J.5
  • 8
    • 84870532154 scopus 로고    scopus 로고
    • Gene Expression Omnibus
    • Gene Expression Omnibus. , http://www.ncbi.nlm.nih.gov/geo
  • 10
    • 1342288026 scopus 로고    scopus 로고
    • Affy--analysis of Affymetrix GeneChip data at the probe level
    • 10.1093/bioinformatics/btg405, 14960456
    • Gautier L, Cope L, Bolstad BM, Irizarry RA. affy--analysis of Affymetrix GeneChip data at the probe level. Bioinformatics 2004, 20:307-315. 10.1093/bioinformatics/btg405, 14960456.
    • (2004) Bioinformatics , vol.20 , pp. 307-315
    • Gautier, L.1    Cope, L.2    Bolstad, B.M.3    Irizarry, R.A.4
  • 11
    • 0142121516 scopus 로고    scopus 로고
    • Exploration, normalization, and summaries of high density oligonucleotide array probe level data
    • 10.1093/biostatistics/4.2.249, 12925520
    • Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, Scherf U, Speed TP. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 2003, 4:249-264. 10.1093/biostatistics/4.2.249, 12925520.
    • (2003) Biostatistics , vol.4 , pp. 249-264
    • Irizarry, R.A.1    Hobbs, B.2    Collin, F.3    Beazer-Barclay, Y.D.4    Antonellis, K.J.5    Scherf, U.6    Speed, T.P.7
  • 12
    • 0037433769 scopus 로고    scopus 로고
    • Statistical tests for identifying differentially expressed genes in time-course microarray experiments
    • 10.1093/bioinformatics/btg068, 12691981
    • Park T, Yi SG, Lee S, Lee SY, Yoo DH, Ahn JI, Lee YS. Statistical tests for identifying differentially expressed genes in time-course microarray experiments. Bioinformatics 2003, 19:694-703. 10.1093/bioinformatics/btg068, 12691981.
    • (2003) Bioinformatics , vol.19 , pp. 694-703
    • Park, T.1    Yi, S.G.2    Lee, S.3    Lee, S.Y.4    Yoo, D.H.5    Ahn, J.I.6    Lee, Y.S.7
  • 13
    • 70149113077 scopus 로고    scopus 로고
    • R: A language and environment for statistical computing
    • R Foundation for Statistical Computing, Vienna, Austria, Team RDC
    • Team RDC R: A language and environment for statistical computing. 2009, R Foundation for Statistical Computing, Vienna, Austria, Team RDC.
    • (2009)
  • 14
  • 15
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • 10.1038/nprot.2008.211, 19131956
    • Huang da W, Sherman BT, Lempicki RA. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 2009, 4:44-57. 10.1038/nprot.2008.211, 19131956.
    • (2009) Nat Protoc , vol.4 , pp. 44-57
    • Huang da, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 16
    • 0023874053 scopus 로고
    • Human gene expression first occurs between the four- and eight-cell stages of preimplantation development
    • 10.1038/332459a0, 3352746
    • Braude P, Bolton V, Moore S. Human gene expression first occurs between the four- and eight-cell stages of preimplantation development. Nature 1988, 332:459-461. 10.1038/332459a0, 3352746.
    • (1988) Nature , vol.332 , pp. 459-461
    • Braude, P.1    Bolton, V.2    Moore, S.3
  • 17
    • 33746879948 scopus 로고    scopus 로고
    • Gene expression profiling of the pre-implantation mouse embryo by microarray analysis: comparison of the two-cell stage and two-cell block
    • 10.1016/j.theriogenology.2006.01.059, 16777209
    • Jeong HJ, Kim HJ, Lee SH, Kwack K, Ahn SY, Choi YJ, Kim HG, Lee KW, Lee CN, Cha KY. Gene expression profiling of the pre-implantation mouse embryo by microarray analysis: comparison of the two-cell stage and two-cell block. Theriogenology 2006, 66:785-796. 10.1016/j.theriogenology.2006.01.059, 16777209.
    • (2006) Theriogenology , vol.66 , pp. 785-796
    • Jeong, H.J.1    Kim, H.J.2    Lee, S.H.3    Kwack, K.4    Ahn, S.Y.5    Choi, Y.J.6    Kim, H.G.7    Lee, K.W.8    Lee, C.N.9    Cha, K.Y.10
  • 18
    • 35548985489 scopus 로고    scopus 로고
    • Conserved molecular portraits of bovine and human blastocysts as a consequence of the transition from maternal to embryonic control of gene expression
    • 10.1152/physiolgenomics.00041.2007, 17595343
    • Adjaye J, Herwig R, Brink TC, Herrmann D, Greber B, Sudheer S, Groth D, Carnwath JW, Lehrach H, Niemann H. Conserved molecular portraits of bovine and human blastocysts as a consequence of the transition from maternal to embryonic control of gene expression. Physiol Genomics 2007, 31:315-327. 10.1152/physiolgenomics.00041.2007, 17595343.
    • (2007) Physiol Genomics , vol.31 , pp. 315-327
    • Adjaye, J.1    Herwig, R.2    Brink, T.C.3    Herrmann, D.4    Greber, B.5    Sudheer, S.6    Groth, D.7    Carnwath, J.W.8    Lehrach, H.9    Niemann, H.10
  • 21
    • 0030697994 scopus 로고    scopus 로고
    • Chromosomal mapping of the human and murine orphan receptors ERRalpha (ESRRA) and ERRbeta (ESRRB) and identification of a novel human ERRalpha-related pseudogene
    • 10.1006/geno.1997.4939, 9344655
    • Sladek R, Beatty B, Squire J, Copeland NG, Gilbert DJ, Jenkins NA, Giguere V. Chromosomal mapping of the human and murine orphan receptors ERRalpha (ESRRA) and ERRbeta (ESRRB) and identification of a novel human ERRalpha-related pseudogene. Genomics 1997, 45:320-326. 10.1006/geno.1997.4939, 9344655.
    • (1997) Genomics , vol.45 , pp. 320-326
    • Sladek, R.1    Beatty, B.2    Squire, J.3    Copeland, N.G.4    Gilbert, D.J.5    Jenkins, N.A.6    Giguere, V.7
  • 22
    • 0031033617 scopus 로고    scopus 로고
    • Mitogen-activated protein kinase activation is involved in platelet-derived growth factor-directed migration by vascular smooth muscle cells
    • Graf K, Xi XP, Yang D, Fleck E, Hsueh WA, Law RE. Mitogen-activated protein kinase activation is involved in platelet-derived growth factor-directed migration by vascular smooth muscle cells. Hypertension 1997, 29:334-339.
    • (1997) Hypertension , vol.29 , pp. 334-339
    • Graf, K.1    Xi, X.P.2    Yang, D.3    Fleck, E.4    Hsueh, W.A.5    Law, R.E.6
  • 24
    • 0034997845 scopus 로고    scopus 로고
    • Mitogen-activated protein (MAP) kinase pathways: regulation and physiological functions
    • 10.1210/er.22.2.153, 11294822
    • Pearson G, Robinson F, Beers Gibson T, Xu BE, Karandikar M, Berman K, Cobb MH. Mitogen-activated protein (MAP) kinase pathways: regulation and physiological functions. Endocr Rev 2001, 22:153-183. 10.1210/er.22.2.153, 11294822.
    • (2001) Endocr Rev , vol.22 , pp. 153-183
    • Pearson, G.1    Robinson, F.2    Beers Gibson, T.3    Xu, B.E.4    Karandikar, M.5    Berman, K.6    Cobb, M.H.7
  • 25
    • 0031035508 scopus 로고    scopus 로고
    • Protein phosphatases control MAP kinase activation and microtubule organization during rat oocyte maturation
    • Zernicka-Goetz M, Verlhac MH, Geraud G, Kubiak JZ. Protein phosphatases control MAP kinase activation and microtubule organization during rat oocyte maturation. Eur J Cell Biol 1997, 72:30-38.
    • (1997) Eur J Cell Biol , vol.72 , pp. 30-38
    • Zernicka-Goetz, M.1    Verlhac, M.H.2    Geraud, G.3    Kubiak, J.Z.4
  • 26
    • 0030764111 scopus 로고    scopus 로고
    • XIST expression in human oocytes and preimplantation embryos
    • 10.1086/513892, 1715845, 9245982
    • Daniels R, Zuccotti M, Kinis T, Serhal P, Monk M. XIST expression in human oocytes and preimplantation embryos. Am J Hum Genet 1997, 61:33-39. 10.1086/513892, 1715845, 9245982.
    • (1997) Am J Hum Genet , vol.61 , pp. 33-39
    • Daniels, R.1    Zuccotti, M.2    Kinis, T.3    Serhal, P.4    Monk, M.5
  • 27
    • 33644848689 scopus 로고    scopus 로고
    • Roadmap to embryo implantation: clues from mouse models
    • 10.1038/nrg1808, 16485018
    • Wang H, Dey SK. Roadmap to embryo implantation: clues from mouse models. Nat Rev Genet 2006, 7:185-199. 10.1038/nrg1808, 16485018.
    • (2006) Nat Rev Genet , vol.7 , pp. 185-199
    • Wang, H.1    Dey, S.K.2
  • 28
    • 24044513952 scopus 로고    scopus 로고
    • Two pathways for ATP release from host cells in enteropathogenic Escherichia coli infection
    • 10.1152/ajpgi.00137.2005, 16093420
    • Crane JK, Naeher TM, Choudhari SS, Giroux EM. Two pathways for ATP release from host cells in enteropathogenic Escherichia coli infection. Am J Physiol Gastrointest Liver Physiol 2005, 289:G407-G417. 10.1152/ajpgi.00137.2005, 16093420.
    • (2005) Am J Physiol Gastrointest Liver Physiol , vol.289
    • Crane, J.K.1    Naeher, T.M.2    Choudhari, S.S.3    Giroux, E.M.4
  • 29
    • 77952548140 scopus 로고    scopus 로고
    • Targeting the ubiquitin-proteasome system to activate wild-type p53 for cancer therapy
    • Epub 2009 Nov 6, 10.1016/j.semcancer.2009.10.004, 19897040
    • Allende-Vega N, Saville MK. Targeting the ubiquitin-proteasome system to activate wild-type p53 for cancer therapy. Semin Cancer Biol 2010, 20(1):29-39. Epub 2009 Nov 6, 10.1016/j.semcancer.2009.10.004, 19897040.
    • (2010) Semin Cancer Biol , vol.20 , Issue.1 , pp. 29-39
    • Allende-Vega, N.1    Saville, M.K.2
  • 30
    • 70449841183 scopus 로고    scopus 로고
    • The regulation of human reproduction by p53 and its pathway
    • 10.4161/cc.8.22.9938, 19884797
    • Hu W, Feng Z, Levine AJ. The regulation of human reproduction by p53 and its pathway. Cell Cycle 2009, 8:3621-3622. 10.4161/cc.8.22.9938, 19884797.
    • (2009) Cell Cycle , vol.8 , pp. 3621-3622
    • Hu, W.1    Feng, Z.2    Levine, A.J.3
  • 31
    • 65849148435 scopus 로고    scopus 로고
    • Attaching and effacing Escherichia coli downregulate DNA mismatch repair protein in vitro and are associated with colorectal adenocarcinomas in humans
    • 10.1371/journal.pone.0005517, 2677459, 19436735
    • Maddocks OD, Short AJ, Donnenberg MS, Bader S, Harrison DJ. Attaching and effacing Escherichia coli downregulate DNA mismatch repair protein in vitro and are associated with colorectal adenocarcinomas in humans. PLoS One 2009, 4:e5517. 10.1371/journal.pone.0005517, 2677459, 19436735.
    • (2009) PLoS One , vol.4
    • Maddocks, O.D.1    Short, A.J.2    Donnenberg, M.S.3    Bader, S.4    Harrison, D.J.5
  • 32
    • 0036213162 scopus 로고    scopus 로고
    • REDOX regulation of early embryo development
    • 10.1530/rep.0.1230479, 11914110
    • Harvey AJ, Kind KL, Thompson JG. REDOX regulation of early embryo development. Reproduction 2002, 123:479-486. 10.1530/rep.0.1230479, 11914110.
    • (2002) Reproduction , vol.123 , pp. 479-486
    • Harvey, A.J.1    Kind, K.L.2    Thompson, J.G.3
  • 33
    • 64649100584 scopus 로고    scopus 로고
    • Mitochondrial function and redox state in mammalian embryos
    • 10.1016/j.semcdb.2008.12.013, 19530278
    • Dumollard R, Carroll J, Duchen MR, Campbell K, Swann K. Mitochondrial function and redox state in mammalian embryos. Semin Cell Dev Biol 2009, 20:346-353. 10.1016/j.semcdb.2008.12.013, 19530278.
    • (2009) Semin Cell Dev Biol , vol.20 , pp. 346-353
    • Dumollard, R.1    Carroll, J.2    Duchen, M.R.3    Campbell, K.4    Swann, K.5
  • 34
    • 38449119759 scopus 로고    scopus 로고
    • Functional genomics of human pre-implantation development
    • 10.1093/bfgp/elm012, 17670767
    • Sudheer S, Adjaye J. Functional genomics of human pre-implantation development. Brief Funct Genomic Proteomic 2007, 6:120-132. 10.1093/bfgp/elm012, 17670767.
    • (2007) Brief Funct Genomic Proteomic , vol.6 , pp. 120-132
    • Sudheer, S.1    Adjaye, J.2
  • 35
    • 0032431212 scopus 로고    scopus 로고
    • Integrins, endometrial maturation, & human embryo implantation
    • 10.1055/s-2007-1016280, 9742626
    • Coutifaris C, Omigbodun A, Coukos G. Integrins, endometrial maturation, & human embryo implantation. Semin Reprod Endocrinol 1998, 16:219-229. 10.1055/s-2007-1016280, 9742626.
    • (1998) Semin Reprod Endocrinol , vol.16 , pp. 219-229
    • Coutifaris, C.1    Omigbodun, A.2    Coukos, G.3
  • 36
    • 0035061265 scopus 로고    scopus 로고
    • Inhibin binding protein in rats: alternative transcripts and regulation in the pituitary across the estrous cycle
    • 10.1210/me.15.4.654, 11266515
    • Bernard DJ, Woodruff TK. Inhibin binding protein in rats: alternative transcripts and regulation in the pituitary across the estrous cycle. Mol Endocrinol 2001, 15:654-667. 10.1210/me.15.4.654, 11266515.
    • (2001) Mol Endocrinol , vol.15 , pp. 654-667
    • Bernard, D.J.1    Woodruff, T.K.2
  • 37
    • 34547101948 scopus 로고    scopus 로고
    • Uterine TRPV6 expression during the estrous cycle and pregnancy in a mouse model
    • 10.1152/ajpendo.00666.2006, 17374692
    • Lee GS, Jeung EB. Uterine TRPV6 expression during the estrous cycle and pregnancy in a mouse model. Am J Physiol Endocrinol Metab 2007, 293:E132-E138. 10.1152/ajpendo.00666.2006, 17374692.
    • (2007) Am J Physiol Endocrinol Metab , vol.293
    • Lee, G.S.1    Jeung, E.B.2
  • 38
    • 38049065344 scopus 로고    scopus 로고
    • Quantitative expression of lysophosphatidic acid receptor 3 gene in porcine endometrium during the periimplantation period and estrous cycle
    • 10.1016/j.prostaglandins.2007.10.001, 18024221
    • Kaminska K, Wasielak M, Bogacka I, Blitek M, Bogacki M. Quantitative expression of lysophosphatidic acid receptor 3 gene in porcine endometrium during the periimplantation period and estrous cycle. Prostaglandins Other Lipid Mediat 2008, 85:26-32. 10.1016/j.prostaglandins.2007.10.001, 18024221.
    • (2008) Prostaglandins Other Lipid Mediat , vol.85 , pp. 26-32
    • Kaminska, K.1    Wasielak, M.2    Bogacka, I.3    Blitek, M.4    Bogacki, M.5
  • 39
    • 70349471141 scopus 로고    scopus 로고
    • Is there a uniform basal endometrial gene expression profile during the implantation window in women who became pregnant in a subsequent ICSI cycle?
    • 10.1093/humrep/dep222, 19542542
    • Allegra A, Marino A, Coffaro F, Lama A, Rizza G, Scaglione P, Sammartano F, Santoro A, Volpes A. Is there a uniform basal endometrial gene expression profile during the implantation window in women who became pregnant in a subsequent ICSI cycle?. Hum Reprod 2009, 24:2549-2557. 10.1093/humrep/dep222, 19542542.
    • (2009) Hum Reprod , vol.24 , pp. 2549-2557
    • Allegra, A.1    Marino, A.2    Coffaro, F.3    Lama, A.4    Rizza, G.5    Scaglione, P.6    Sammartano, F.7    Santoro, A.8    Volpes, A.9
  • 41
    • 77950466252 scopus 로고    scopus 로고
    • A systems biology approach towards understanding the process of blastocyst implantation
    • Najwa AR, Sengupta J, Ghosh D. A systems biology approach towards understanding the process of blastocyst implantation. Indian J Physiol Pharmacol 2009, 53:197-208.
    • (2009) Indian J Physiol Pharmacol , vol.53 , pp. 197-208
    • Najwa, A.R.1    Sengupta, J.2    Ghosh, D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.