Evaluation of molecular tools for detection and drug susceptibility testing of Mycobacterium tuberculosis in stool specimens from patients with pulmonary tuberculosis

Journal of Clinical Microbiology

Volumn 48, Issue 5, 2010, Pages 1820-1826

  Cordova, Julianna ^a   Shiloh, Ron ^b,c   Gilman, Robert H ^a,b,d,f   Sheen, Patricia ^a   Martin, Laura ^b   Arenas, Fanny ^a   Caviedes, Luz ^a   Kawai, Vivian ^b   Soto, Giselle ^b   Williams, Diana L ^e   Zimic, Mirko ^a   Escombe, A Roderick ^b,f   Evans, Carlton A ^a,b,d,f  

^a UNIVERSIDAD PERUANA CAYETANO HEREDIA   (Peru)

^b ASOCIACIÓN BENÉFICA PRISMA   (Peru)

^c HARVARD MEDICAL SCHOOL   (United States)

^d JOHNS HOPKINS BLOOMBERG SCHOOL OF PUBLIC HEALTH   (United States)

^e U S DEPARTMENT OF HEALTH AND HUMAN SERVICES   (United States)

^f IMPERIAL COLLEGE LONDON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ISONIAZID; RIFAMPICIN;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIUM DETECTION; CONTROLLED STUDY; DIAGNOSTIC ACCURACY; DNA EXTRACTION; DRUG SENSITIVITY; FECES ANALYSIS; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS INFECTED PATIENT; LUNG TUBERCULOSIS; MAJOR CLINICAL STUDY; MYCOBACTERIUM TUBERCULOSIS; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SENSITIVITY AND SPECIFICITY; SPUTUM CULTURE;

ANTITUBERCULAR AGENTS; DNA TRANSPOSABLE ELEMENTS; DNA, BACTERIAL; DRUG RESISTANCE, BACTERIAL; FECES; HIV INFECTIONS; HUMANS; MICROBIAL SENSITIVITY TESTS; MYCOBACTERIUM TUBERCULOSIS; POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; SPUTUM; TIME FACTORS; TUBERCULOSIS, PULMONARY;

MYCOBACTERIUM TUBERCULOSIS;

EID: 77951771634     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.01161-09     Document Type: Article

References (32)

1. Anonymous. 2005. Tuberculosis en el Peru: informe anual, 2004. Direccion General de Salud de las Personas, Ministerio de Salud del Peru, Lima, Peru.
2. Arias, M., F. C. Mello, A. Pavon, A. G. Marsico, C. Alvarado-Galvez, S. Rosales, C. L. Pessoa, M. Perez, M. K. Andrade, A. L. Kritski, L. S. Fonseca, R. E. Chaisson, M. E. Kimerling, and S. E. Dorman. 2007. Clinical evaluation of the microscopic-observation drug-susceptibility assay for detection of tuberculosis. Clin. Infect. Dis. 44:674-680.
3. Balamurugan, R., S. Venkataraman, K. R. John, and B. S. Ramakrishna. 2006. PCR amplification of the IS6110 insertion element of Mycobacterium tuberculosis in fecal samples from patients with intestinal tuberculosis. J. Clin. Microbiol. 44:1884-1886.
4. Caviedes, L., J. Delgado, and R. H. Gilman. 2002. Tetrazolium microplate assay as a rapid and inexpensive colorimetric method for determination of antibiotic susceptibility of Mycobacterium tuberculosis. J. Clin. Microbiol. 40:1873-1874.
5. Caviedes, L., T. S. Lee, R. H. Gilman, P. Sheen, E. Spellman, E. H. Lee, D. E. Berg, and S. Montenegro-James. 2000. Rapid, efficient detection and drug susceptibility testing of Mycobacterium tuberculosis in sputum by microscopic observation of broth cultures. J. Clin. Microbiol. 38:1203-1208.
6. Chakravorty, S., and J. S. Tyagi. 2001. Novel use of guanidinium isothiocyanate in the isolation of Mycobacterium tuberculosis DNA from clinical material. FEMS Microbiol. Lett. 205:113-117.
7. Colebunders, R., M. Nembunzu, F. Portaels, K. Lusakumunu, B. Kapita, and P. Piot. 1990. Isolation of mycobacteria from stools and intestinal biopsies from HIV seropositive and HIV seronegative patients with and without diarrhea in Kinshasa, Zaire. Preliminary results. Ann. Soc. Belg. Med. Trop. 70:303-309.
8. Conde, M. B., A. C. Loivos, V. M. Rezende, S. L. Soares, F. C. Mello, A. L. Reingold, C. L. Daley, and A. L. Kritski. 2003. Yield of sputum induction in the diagnosis of pleural tuberculosis. Am. J. Respir. Crit. Care Med. 167:723-725.
9. Conlon, C. P., H. M. Banda, N. P. Luo, M. K. Namaambo, C. U. Perera, and J. Sikweze. 1989. Faecal mycobacteria and their relationship to HIV-related enteritis in Lusaka, Zambia. AIDS 3:539-541.
10. Corbett, E. L., C. J. Watt, N. Walker, D. Maher, B. G. Williams, M. C. Raviglione, and C. Dye. 2003. The growing burden of tuberculosis: global trends and interactions with the HIV epidemic. Arch. Intern. Med. 163:1009-1021.
11. Donald, P. R., H. S. Schaaf, R. P. Gie, N. Beyers, F. A. Sirgel, and A. Venter. 1996. Stool microscopy and culture to assist the diagnosis of pulmonary tuberculosis in childhood. J. Trop. Pediatr. 42:311-312.
12. Drobniewski, F. A., and S. M. Wilson. 1998. The rapid diagnosis of isoniazid and rifampicin resistance in Mycobacterium tuberculosis - a molecular story. J. Med. Microbiol. 47:189-196.
13. Espinal, M. A. 2003. The global situation of MDR-TB. Tuberculosis (Edinb.) 83:44-51.
14. Franchi, L. M., R. I. Cama, R. H. Gilman, S. Montenegro-James, and P. Sheen. 1998. Detection of Mycobacterium tuberculosis in nasopharyngeal aspirate samples in children. Lancet 352:1681-1682. (Letter.)
15. Hartung, T. K., A. Maulu, J. Nash, and V. G. Fredlund. 2002. Suspected pulmonary tuberculosis in rural South Africa - sputum induction as a simple diagnostic tool? S. Afr. Med. J. 92:455-458.
16. Kawai, V., G. Soto, R. H. Gilman, C. T. Bautista, L. Caviedes, L. Huaroto, E. Ticona, J. Ortiz, M. Tovar, V. Chavez, R. Rodriguez, A. R. Escombe, and C. A. Evans. 2006. Tuberculosis mortality, drug resistance, and infectiousness in patients with and without HIV infection in Peru. Am. J. Trop. Med. Hyg. 75:1027-1033.
17. Kent, P. T., and G. P. Kubica. 1985. Public health mycobacteriology: a guide for the level III laboratory. USDHHS, Centers for Disease Control, Atlanta, GA.
18. Kox, L. F., D. Rhienthong, A. M. Miranda, N. Udomsantisuk, K. Ellis, J. van Leeuwen, S. van Heusden, S. Kuijper, and A. H. Kolk. 1994. A more reliable PCR for detection of Mycobacterium tuberculosis in clinical samples. J. Clin. Microbiol. 32:672-678.
19. Lachnik, J., B. Ackermann, A. Bohrssen, S. Maass, C. Diephaus, A. Puncken, M. Stermann, and F. C. Bange. 2002. Rapid-cycle PCR and fluorimetry for detection of mycobacteria. J. Clin. Microbiol. 40:3364-3373.
20. Maartens, G. 2002. Advances in adult pulmonary tuberculosis. Curr. Opin. Pulm. Med. 8:173-177.
21. Mavenyengwa, R. T., and P. Nziramasanga. 2003. Use of culture methods for recovery of atypical mycobacteria from stools of AIDS patients. Cent. Afr. J. Med. 49:31-37.
22. Mayta, H., R. H. Gilman, F. Arenas, T. Valencia, L. Caviedes, S. H. Montenegro, E. Ticona, J. Ortiz, R. Chumpitaz, C. A. Evans, and D. L. Williams. 2003. Evaluation of a PCR-based universal heteroduplex generator assay as a tool for rapid detection of multidrug-resistant Mycobacterium tuberculosis in Peru. J. Clin. Microbiol. 41:5774-5777.
23. Mirdha, B. R. 2003. Mycobacterium avium-intracellulare in stool in HIV-seropositive man. Indian J. Gastroenterol. 22:25.
24. Montenegro, S. H., R. H. Gilman, P. Sheen, R. Cama, L. Caviedes, T. Hopper, R. Chambers, and R. A. Oberhelman. 2003. Improved detection of Mycobacterium tuberculosis in Peruvian children by use of a heminested IS6110 polymerase chain reaction assay. Clin. Infect. Dis. 36:16-23.
25. Moore, D., C. Evans, R. Gilman, D. Vargas, and R. Escombe. 2005. Appropriate technology in tuberculosis diagnostics. Lancet 365:1541-1542.
26. Moore, D. A., C. A. Evans, R. H. Gilman, L. Caviedes, J. Coronel, A. Vivar, E. Sanchez, Y. Pinedo, J. C. Saravia, C. Salazar, R. Oberhelman, M. G. Hollm-Delgado, D. LaChira, A. R. Escombe, and J. S. Friedland. 2006. Microscopic-observation drug-susceptibility assay for the diagnosis of TB. N. Engl. J. Med. 355:1539-1550.
27. Moore, D. A., D. Mendoza, R. H. Gilman, C. A. Evans, M. G. Hollm Delgado, J. Guerra, L. Caviedes, D. Vargas, E. Ticona, J. Ortiz, G. Soto, and J. Serpa. 2004. Microscopic observation drug susceptibility assay, a rapid, reliable diagnostic test for multidrug-resistant tuberculosis suitable for use in resource-poor settings. J. Clin. Microbiol. 42:4432-4437.
28. Rossi, M. C., A. Gori, G. Zehender, G. Marchetti, G. Ferrario, C. De Maddalena, L. Catozzi, A. Bandera, A. D. Esposti, and F. Franzetti. 2000. A PCR-colorimetric microwell plate hybridization assay for detection of Mycobacterium tuberculosis and M. avium from culture samples and Ziehl-Neelsen-positive smears. J. Clin. Microbiol. 38:1772-1776.
29. Shiferaw, G., Y. Woldeamanuel, M. Gebeyehu, F. Girmachew, D. Demessie, and E. Lemma. 2007. Evaluation of microscopic observation drug susceptibility assay for the detection of multidrug-resistant tuberculosis. J. Clin. Microbiol. 45:1093-1097.
30. Soini, H., and J. M. Musser. 2001. Molecular diagnosis of mycobacteria. Clin. Chem. 47:809-814.
31. Tovar, M., M. J. Siedner, R. H. Gilman, C. Santillan, L. Caviedes, T. Valencia, O. Jave, A. R. Escombe, D. A. Moore, and C. A. Evans. 2008. Improved diagnosis of pleural tuberculosis using the microscopic-observation drug-susceptibility technique. Clin. Infect. Dis. 46:909-912.
32. Wolf, H., M. Mendez, R. H. Gilman, P. Sheen, G. Soto, A. K. Velarde, M. Zimic, A. R. Escombe, S. Montenegro, R. A. Oberhelman, and C. A. Evans. 2008. Diagnosis of pediatric pulmonary tuberculosis by stool PCR. Am. J. Trop. Med. Hyg. 79:893-898.