메뉴 건너뛰기




Volumn 3, Issue 4, 2010, Pages 135-142

Proteome profile of zebrafish brain based on gel LC-ESI MS/MS analysis

Author keywords

[No Author keywords available]

Indexed keywords

ANIMALIA; DANIO RERIO; VERTEBRATA;

EID: 77951717562     PISSN: None     EISSN: 0974276X     Source Type: Journal    
DOI: 10.4172/jpb.1000132     Document Type: Article
Times cited : (17)

References (30)
  • 1
    • 33748548991 scopus 로고    scopus 로고
    • Effects of chronic ehtnaol administration on brain protein levels: A proteomic investigation using 2-D DIGE system
    • Damodaran S, Dlugos CA, Wood TD, Rabin RA (2006) Effects of chronic ehtnaol administration on brain protein levels: A proteomic investigation using 2-D DIGE system. Eur J Pharmacol 547: 75-82.
    • (2006) Eur J Pharmacol , vol.547 , pp. 75-82
    • Damodaran, S.1    Dlugos, C.A.2    Wood, T.D.3    Rabin, R.A.4
  • 2
    • 70349326048 scopus 로고    scopus 로고
    • Large-scale proteome profile of the zebrafish (Danio rerio) gill for physiological and biomarker discovery studies
    • De Souza AG, Maccormack TJ, Wang N, Li L, Goss GG (2009) Large-scale proteome profile of the zebrafish (Danio rerio) gill for physiological and biomarker discovery studies. Zebrafish 6: 229-238.
    • (2009) Zebrafish , vol.6 , pp. 229-238
    • de Souza, A.G.1    Maccormack, T.J.2    Wang, N.3    Li, L.4    Goss, G.G.5
  • 3
    • 0038005018 scopus 로고    scopus 로고
    • DAVID: Database for Annotation, Visualization, and Integrated Discovery
    • Dennis G, Sherman BT, Hosack DA, Yang J, Gao W, et al. (2003) DAVID: Database for Annotation, Visualization, and Integrated Discovery. Genome Biol 4: R60.
    • (2003) Genome Biol , vol.4
    • Dennis, G.1    Sherman, B.T.2    Hosack, D.A.3    Yang, J.4    Gao, W.5
  • 5
  • 7
    • 3042554008 scopus 로고    scopus 로고
    • Application of proteomics technologies in the investigation of the brain
    • Fountoulakis M (2004) Application of proteomics technologies in the investigation of the brain. Mass Spectrom Rev 23: 231-258.
    • (2004) Mass Spectrom Rev , vol.23 , pp. 231-258
    • Fountoulakis, M.1
  • 8
    • 0032935361 scopus 로고    scopus 로고
    • Analysis of the mouse proteome. (I) Brain proteins: Separation by two-dimensional electrophoresis and identification by mass spectrometry and genetic variation
    • Gauss C, Kalkum M, Löwe M, Lehrach H, Klose J (1999) Analysis of the mouse proteome. (I) Brain proteins: separation by two-dimensional electrophoresis and identification by mass spectrometry and genetic variation. Electrophoresis 20: 575-600.
    • (1999) Electrophoresis , vol.20 , pp. 575-600
    • Gauss, C.1    Kalkum, M.2    Löwe, M.3    Lehrach, H.4    Klose, J.5
  • 9
    • 58149465395 scopus 로고    scopus 로고
    • Decoy methods for assessing false positives and false discovery rates in shotgun proteomics
    • Guanghui W, Wells WW, Zheng Z, Shyama M, Rong-Fong S (2009) Decoy methods for assessing false positives and false discovery rates in shotgun proteomics. Anal Chem 81: 146-150.
    • (2009) Anal Chem , vol.81 , pp. 146-150
    • Guanghui, W.1    Wells, W.W.2    Zheng, Z.3    Shyama, M.4    Rong-Fong, S.5
  • 10
    • 67650732786 scopus 로고    scopus 로고
    • Using zebrafish to assess the impact of drugs on neural development and function
    • Guo S (2009) Using zebrafish to assess the impact of drugs on neural development and function. Expert Opin Drug Discov 4: 715-726.
    • (2009) Expert Opin Drug Discov , vol.4 , pp. 715-726
    • Guo, S.1
  • 11
    • 0942287072 scopus 로고    scopus 로고
    • Proteogenomic mapping as a complementary method to perform genome annotation
    • Jaffe JD, Berg HC, Church GM (2004a) Proteogenomic mapping as a complementary method to perform genome annotation. Proteomics 4: 59-77.
    • (2004) Proteomics , vol.4 , pp. 59-77
    • Jaffe, J.D.1    Berg, H.C.2    Church, G.M.3
  • 13
    • 16644386470 scopus 로고    scopus 로고
    • The zebrafish genome project: Sequence analysis and annotation
    • Jekosch K (2004) The zebrafish genome project: sequence analysis and annotation. Methods Cell Biol 77: 225-239.
    • (2004) Methods Cell Biol , vol.77 , pp. 225-239
    • Jekosch, K.1
  • 14
    • 33644875983 scopus 로고    scopus 로고
    • PRIDE: A public repository of protein and peptide identifications for the proteomics community
    • Jones P, Cote RG, Martens L, Quinn AF, Taylor CF, et al. (2006) PRIDE: a public repository of protein and peptide identifications for the proteomics community. Nucleic Acids Res 34: D659-D663.
    • (2006) Nucleic Acids Res , vol.34
    • Jones, P.1    Cote, R.G.2    Martens, L.3    Quinn, A.F.4    Taylor, C.F.5
  • 15
    • 25444475024 scopus 로고    scopus 로고
    • Genome annotation of Anopheles gambiae using mass spectrometry-derived data
    • Kalume DE, Peri S, Reddy R, Zhong J, Okulate M, et al. (2005) Genome annotation of Anopheles gambiae using mass spectrometry-derived data. BMC Genomics 6: 128.
    • (2005) BMC Genomics , vol.6 , pp. 128
    • Kalume, D.E.1    Peri, S.2    Reddy, R.3    Zhong, J.4    Okulate, M.5
  • 16
    • 0032517139 scopus 로고    scopus 로고
    • Characterization of the Huntington's disease (HD) gene homologue in the zebrafish Danio rerio
    • Karlovich C, John R, Ramirez L, Stainier D, Myers R (1998) Characterization of the Huntington's disease (HD) gene homologue in the zebrafish Danio rerio. Gene 14: 117-125.
    • (1998) Gene , vol.14 , pp. 117-125
    • Karlovich, C.1    John, R.2    Ramirez, L.3    Stainier, D.4    Myers, R.5
  • 17
    • 0033550061 scopus 로고    scopus 로고
    • Zebrafish (Danio rerio) presenilin promotesaberrant amyloid beta-peptide production and requires a criticalaspartate residue for its function in amyloidogenesis
    • Leimer U, Lun K, Romig H, Walter J, Grunberg J, et al. (1999) Zebrafish (Danio rerio) presenilin promotesaberrant amyloid beta-peptide production and requires a criticalaspartate residue for its function in amyloidogenesis. Biochemistry 38: 13602-13609.
    • (1999) Biochemistry , vol.38 , pp. 13602-13609
    • Leimer, U.1    Lun, K.2    Romig, H.3    Walter, J.4    Grunberg, J.5
  • 18
    • 34247186766 scopus 로고    scopus 로고
    • Animal models of human disease: Zebrafish swim into view
    • Lieschke GJ, Currie PD (2007) Animal models of human disease: Zebrafish swim into view. Nat Rev Genet 8: 353-367.
    • (2007) Nat Rev Genet , vol.8 , pp. 353-367
    • Lieschke, G.J.1    Currie, P.D.2
  • 19
    • 69949105882 scopus 로고    scopus 로고
    • Proteome analysis of a single zebrafish embryo using three different digestion strategies coupled with liquid chromatography-tandem mass spectrometry
    • Lin Y, Chen Y, Yang X, Xu D, Liang S (2009) Proteome analysis of a single zebrafish embryo using three different digestion strategies coupled with liquid chromatography-tandem mass spectrometry. Anal Biochem 394: 177-185.
    • (2009) Anal Biochem , vol.394 , pp. 177-185
    • Lin, Y.1    Chen, Y.2    Yang, X.3    Xu, D.4    Liang, S.5
  • 22
    • 66249122074 scopus 로고    scopus 로고
    • Proteome profile of the mature rat olfactory bulb
    • Maurya DK, Sundaram CS, Bhargava P (2009) Proteome profile of the mature rat olfactory bulb. Proteomics 9: 2593-2599.
    • (2009) Proteomics , vol.9 , pp. 2593-2599
    • Maurya, D.K.1    Sundaram, C.S.2    Bhargava, P.3
  • 23
    • 0033780376 scopus 로고    scopus 로고
    • Effective gene targeted "knockdown" in zebrafish
    • Nasevicius A, Ekker SC (2000) Effective gene targeted "knockdown" in zebrafish. Nat Genet 26: 216-220.
    • (2000) Nat Genet , vol.26 , pp. 216-220
    • Nasevicius, A.1    Ekker, S.C.2
  • 24
    • 47749128164 scopus 로고    scopus 로고
    • Proteomic changes in rat hippocampus and adrenals following short-term sleep deprivation
    • Poirrier JE, Guillonneau F, Renaut J, Sergeant K, Luxen A, et al. (2008) Proteomic changes in rat hippocampus and adrenals following short-term sleep deprivation. Proteome Sci 22: 6-14.
    • (2008) Proteome Sci , vol.22 , pp. 6-14
    • Poirrier, J.E.1    Guillonneau, F.2    Renaut, J.3    Sergeant, K.4    Luxen, A.5
  • 26
    • 0344121266 scopus 로고    scopus 로고
    • Cloning and expression analysis of a Parkinson's disease gene uch-L1 and its promoter in zebrafish
    • Son OL, Kim HT, Ji MH, Yoo KW, Rhee M, et al. (2003) Cloning and expression analysis of a Parkinson's disease gene uch-L1 and its promoter in zebrafish. Biochem Biophys Res Commun 19: 601-607.
    • (2003) Biochem Biophys Res Commun , vol.19 , pp. 601-607
    • Son, O.L.1    Kim, H.T.2    Ji, M.H.3    Yoo, K.W.4    Rhee, M.5
  • 27
    • 33744480776 scopus 로고    scopus 로고
    • Proteomic analysis of protein profiles during early development of the zebrafish Danio rerio
    • Tay TL, Lin Q, Seow TK, Tan KH, Hew CL, et al. (2006) Proteomic analysis of protein profiles during early development of the zebrafish Danio rerio. Proteomics 6: 3176-3188.
    • (2006) Proteomics , vol.6 , pp. 3176-3188
    • Tay, T.L.1    Lin, Q.2    Seow, T.K.3    Tan, K.H.4    Hew, C.L.5
  • 28
    • 32344447939 scopus 로고    scopus 로고
    • Characterization of the Mouse Brain Proteome using global Proteomic analysis complemented with cysteinyl-peptide enrichment
    • Wang H, Qian WJ, Chin MH, Petyuk VA, Barry RC, et al. (2006) Characterization of the Mouse Brain Proteome using global Proteomic analysis complemented with cysteinyl-peptide enrichment. J Proteome Res 5: 361-369.
    • (2006) J Proteome Res , vol.5 , pp. 361-369
    • Wang, H.1    Qian, W.J.2    Chin, M.H.3    Petyuk, V.A.4    Barry, R.C.5
  • 29
    • 33846620538 scopus 로고    scopus 로고
    • Proteome profile of cytosolic component of zebrafish liver generated by LC-ESI MS/MS combined with trypsin digestion and microwave-assisted acid hydrolysis
    • Wang N, Mackenzie L, De Souza AG, Zhong H, Goss G, et al. (2007) Proteome profile of cytosolic component of zebrafish liver generated by LC-ESI MS/MS combined with trypsin digestion and microwave-assisted acid hydrolysis. J Proteome Res 6: 263-272.
    • (2007) J Proteome Res , vol.6 , pp. 263-272
    • Wang, N.1    Mackenzie, L.2    de Souza, A.G.3    Zhong, H.4    Goss, G.5
  • 30
    • 0033052683 scopus 로고    scopus 로고
    • Zebrafish: A new model for human disease
    • Zon LI (1999) Zebrafish: a new model for human disease. Genome Res 9: 99-100.
    • (1999) Genome Res , vol.9 , pp. 99-100
    • Zon, L.I.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.