Visualizing gene expression data via voronoi treemaps

6th International Symposium on Voronoi Diagrams in Science and Engineering, ISVD 2009

Volumn , Issue , 2009, Pages 233-241

  Bernhardt, Jörg ^a,b   Funke, Stefan ^a   Hecker, Michael ^a   Siebourg, Juliane ^a  

^a UNIVERSITY OF GREIFSWALD   (Germany)

^b DECODON GmbH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL DATA; GENE EXPRESSION ANALYSIS; GENE EXPRESSION DATA; GENE ONTOLOGY; HIERARCHICAL CLASSIFICATION; ORTHOLOGY; TREE-MAPS; VORONOI;

COMPUTATIONAL GEOMETRY; ONTOLOGY;

GENE EXPRESSION;

EID: 77951479405     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ISVD.2009.33     Document Type: Conference Paper

References (8)

1. M. Balzer and O. Deussen. Voronoi treemaps. In Proceedings of the IEEE Symposium on Information Visualization, pages 49-56, Los Alamitos, CA, USA, 2005. IEEE Computer Society. (Pubitemid 44500037)
2. Mohammad-Hossein Bateni, Mohammad-Taghi Hajiaghayi, Erik D. Demaine, and Mohammad Moharrami. Plane embeddings of planar graph metrics. In SCG '06: Proceedings of the twenty-second annual symposium on Computational geometry, pages 197-206, New York, NY, USA, 2006. ACM.
3. Mark Bruls, Kees Huizing, and Jarke J. Van Wijk. Squarified treemaps. In Proceedings of the Joint Eurographics and IEEE TCVG Symposium on Visualization, pages 33-42. Press, 2000
4. The Gene Ontology Consortium. Creating the gene ontology resource: design and implementation. Genome Res, 11(8):1425-1433, August 2001.
5. Brian Johnson and Ben Shneiderman. Tree-maps: a spacefilling approach to the visualization of hierarchical information structures. In VIS '91: Proceedings of the 2nd conference on Visualization '91, pages 284-291, Los Alamitos, CA, USA, 1991. IEEE Computer Society Press.
6. M. Kanehisa, S. Goto, S. Kawashima, Y. Okuno, and M. Hattori. The KEGG resource for deciphering the genome. Nucleic Acids Res, 32(Database issue), January 2004.
7. T. Koburger, J. Weibezahn, J. Bernhardt, G. Homuth, and M. Hecker. Genome-wide mRNA profiling in glucose starved Bacillus subtilis cells. Molecular Genetics and Genomics, 274(1):1-12, 2005.
8. Kurt Mehlhorn, Stefan Näher, and Christian Uhrig. The LEDA platform of combinatorial and geometric computing. In ICALP '97: Proceedings of the 24th International Colloquium on Automata, Languages and Programming, pages 7-16, London, UK, 1997. Springer-Verlag.