Authentication of atlantic cod (Gadus morhua) Using real time PCR

Journal of Agricultural and Food Chemistry

Volumn 58, Issue 8, 2010, Pages 4794-4799

  Herrero, Beatriz ^a   Madriñán, María ^a   Vieites, Juan M ^a   Espiñeira, Montserrat ^a  

^a ANFACO CECOPESCA   (Spain)

Author keywords

Cod; Gadus morhua; PCR; Real time PCR; Species identification; Taqman

Indexed keywords

PRIMER DNA;

ANIMAL; ARTICLE; ATLANTIC COD; DNA PROBE; GENETICS; METHODOLOGY; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION;

ANIMALS; BASE SEQUENCE; DNA PRIMERS; DNA PROBES; GADUS MORHUA; POLYMERASE CHAIN REACTION;

GADUS MORHUA;

EID: 77951266535     PISSN: 00218561     EISSN: 15205118     Source Type: Journal    
DOI: 10.1021/jf904018h     Document Type: Article

References (33)

1. Rose, G. A. Reconciling overfishing and climate change with stock dynamics of Atlantic cod (Gadus morhua) over 500 years Can. J. Fish. Aquat. Sci. 2004, 61, 1553-1557
2. EU, Reglamento (CE) no 2065/2001 de la Comisión, de 22 de octubre de 2001, por el que se establecen las disposiciones de aplicación del Reglamento (CE) n° 104/2000 del Consejo en lo relativo a la información del consumidor en el sector de los productos de la pesca y de la acuicultura.
3. EU, Reglamento (CE) No 104/2000 del consejo de 17 de diciembre de 1999 por el que se establece la organización común de mercados en el sector de los productos de la pesca y de la acuicultura.
4. Akasaki, T.; Yanagimoto, T.; Yamakami, K.; Tomonaga, H.; Sato, S. Species identification and PCR-RFLP analysis of cytochrome b gene in cod fish (order Gadiformes) products J. Food Sci. 2006, 71, 190-195
5. Comi, G.; Iacumin, L.; Rantsiou, K.; Cantoni, C.; Cocolin, L. Molecular methods for the differentiation of species used in production of cod-fish can detect commercial frauds Food Control 2005, 16, 37-42
6. Perez, J.; Garcia-Vazquez, E. Genetic identification of nine hake species for detection of comercial fraud J. Food Prot. 2004, 67, 2792-2796
7. Pérez, M.; Presa, P. Validation of tRNA-Glu-cytochrome b key for the molecular identification of twelve hake species (Merluccius spp.) and Atlantic cod (Gadus morhua) using PCR-RFLPs, FINS and BLAST J. Agric. Food Chem. 2008, 56 (22) 10865-10871
8. Wolf, C.; Burgener, M.; Hubner, P.; Luthy, J. PCR-RFLP analysis of mitochondrial DNA: Differentiation of fish species Lebensm.-Wiss. Technol. 2000, 33, 144-150
9. D'Amato, M.E.; Lunt, D.H., H.; Carvalho, G. R. Microsatellite markers for the hake Macruronus magellanicus amplify other gadoid fish Mol. Ecol. 1999, 8, 1086-1088
10. Pampoulie, C.; Ruzzante, D. E.; Chosson, V.; Jorundsdottir, T. D.; Taylor, L.; Thorsteinsson, V.; Danielsdottir, A. K.; Marteinsdottir, G. The genetic structure of Atlantic cod (Gadus morhua) around Iceland: insight from microsatellites, the Pan I locus and taggeting experiments C. J. Fish. Aquat. Sci. 2006, 63, 2660-2674
11. Castillo, A. G. F.; Martinez, J. L.; Garcia-Vazquez, E. Identification of Atlantic hake species by a simple PCR-based methodology employing microsatellite loci J. Food Prot. 2003, 66, 2130-2134
12. Bayha, K. M.; Graham, W. M.; Hernandez, F. J., Jr Multiplex assay to identify eggs of three fish species from the northern Gulf of Mexico, using locked nucleic acid Taqman real-time PCR probes Aquat. Biol. 2008, 4, 65-73
13. Fox, C. J.; Taylor, M. I.; Pereyra, R.; Villasana, M. I.; Rico, C. TaqMan DNA technology confirms likely overestimation of cod (Gadus morhua L.) egg abundance in the Irish Sea: implications for the assessment of the cod stock and mapping of spawning areas using egg-based methods Mol. Ecol. 2005, 14, 879-884
14. Dalmasso, A.; Fontanella, E.; Piatti, P.; Civera, T.; Secchi, C.; Bottero, M. T. Identification of four tuna species by means of Real-Time PCR and melting curve analysis Vet. Res. Commun. 2007, 31 (1) 335-357
15. Lopez, I.; Pardo, M. A. Application of relative quatification TaqMan real-time polymerase chain reaction technology for the identification and quantification of Thunnus alalunga and Thunnus albacares J. Agric. Food Chem. 2005, 53, 2039-2045
16. Trotta, M.; Scönhuth, S.; Pepe, T.; Cortesi, M. L.; Puyet, A.; Bautista, J. M. Multiplex PCR method for use in real-time PCR for identification of fish fillets from grouper (Epinephelus and Mycteroperca species) and common substitutes species J. Agric. Food Chem. 2005, 53 (6) 2039-2045
17. Taylor, M. I.; Fox, C.; Rico, I.; Rico, C. Species specific TaqMan probes for simultaneous identification of (Gadus morhua L.) haddock (Melanogrammus aeglefinus L.) and whiting (Merlangius merlangus L.) Mol. Ecol. Notes 2002, 2, 599-601
18. Cohen, D. M.; Inada, T.; Iwamoto, T.; Scialabba, N. FAO species catalogue. Gadiform fishes of the world (Order Gadiformes). An annotated and illustrated catalogue of cods, hakes, grenadiers and other gadiform fishes known to date FAO Fish. Synop. 1990, 10 (125): 442 p.
19. Roger, S. O.; Bendich, A. J. Extraction of DNA from Plant Tissues Plant Mol. Biol. Manual 1988, A6) 1-10
20. Hall, T. A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT Nucl. Acids Symp. Ser. 1999, 41) 95-98
21. Altschul, S. F.; Madden, T. L.; Schäffer, A. A.; Zhang, J; Zhang, Z; Miller, W; Lipman, D. J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res. 1997, 25 (17) 3389-3402
22. Burgener, M. Molecular Species Differentiation of Fish and Mammals. Ph.D. Thesis, University of Bern, Switzerland, 1997.
23. Espiñeira, M.; Gonzalez-Lavin, N.; Vieites, J. M.; Santaclara, F. J. Development of a method for the genetic identification of flatfish species on the basis of mitochondrial DNA sequences J. Agric. Food Chem. 2008, 56, 8954-8961
24. Vadopalas, B.; Bouma, J. V.; Jackels, C. R.; Friedman, C. S. Application of real-time PCR for simultaneous identification and quantification of larval abalone J. Exp. Marine Biol. Ecol. 2006, 334 (2) 219-228
25. Hanna, S. E.; Connor, C. J.; Wang, H. H. Real-time polymerase chain reaction for the food microbiologist: technologies, applications, and limitations J. Food Sci. 2006, 70 (3) R49-R53
26. Hernandez, M.; Esteve, T.; Pla, M Real-time polymerase chain reaction based assays for quantitative detection of barley, rice, sunflower, and wheat J. Agric. Food Chem. 2005, 53, 7003-7009
27. Hernandez, M.; Rodriguez-Lázaro, D.; Fernando, A. Current methodology for detection, identification and quantification of genetically modified organisms Curr. Anal. Chem. 2005, 1 (2) 203-221
28. Hird, H.; Lloyd, J.; Goodier, R.; Brown, J.; Reece, P. Detection of peanut using real-time polymerase chain reaction Eur. Food Res. Technol. 2003, 217, 265-268
29. Jonker, K. M.; Tilburg, J.; Hagele, G. H.; de Boer, E Species identification in meat products using real-time PCR Food Addit. Contam. 2008, 25 (5) 527-533
30. Kesmen, Z.; Gulluce, A.; Sahin, F.; Yetim, H. Identification of meat species by TaqMan-based real-time PCR assay Meat Sci. 2009, 82 (4) 444-449
31. Kumari, R. Meat Species Identification by Real Time PCR. Masters Thesis, College of Veterinary Science and Animal Husbandry, Anand Agricultural University, Anand, Gujarat 388 001, 2007.
32. Laube, I.; Spiegelberg, A.; Butschke, A.; Zagon, J.; Kroh, L.; Broll, H. Methods for the detection of beef and pork in foods using real-time polymerase chain reaction Int. J. Food Sci. Technol. 2003, 38, 111-118
33. Pfaffl, M. W. Quantification Strategies in Real-Time PCR. In A-Z of Quantitative PCR; S. A., Ed.; International University Line: La Jolla, CA, 2004; pp 87-120.