Structure of human CLIC3 at Åresolution

Proteins: Structure, Function and Bioinformatics

Volumn 78, Issue 6, 2010, Pages 1594-1600

  Littler, D R ^a   Brown, L J ^b   Breit, S N ^c   Perrakis, A ^a   Curmi, P M G ^c,d  

^a NETHERLANDS CANCER INSTITUTE   (Netherlands)

^b MACQUARIE UNIVERSITY   (Australia)

^c ST VINCENT S HOSPITAL   (Australia)

^d UNIVERSITY OF NEW SOUTH WALES   (Australia)

Author keywords

CLIC3; Crystallography; Glutathione transferase; GST; X ray

Indexed keywords

CHLORIDE CHANNEL; CHLORIDE CHANNEL CLIC3; COMPLEMENTARY DNA; MITOGEN ACTIVATED PROTEIN KINASE; UNCLASSIFIED DRUG;

AMINO TERMINAL SEQUENCE; ARTICLE; CONTROLLED STUDY; CRYSTALLIZATION; MOLECULAR CLONING; MOLECULAR MODEL; PRIORITY JOURNAL; PROTEIN LOCALIZATION; PROTEIN PURIFICATION; PROTEIN STRUCTURE; STRUCTURE ANALYSIS; TWO HYBRID SYSTEM;

CHLORIDE CHANNELS; CRYSTALLOGRAPHY, X-RAY; HUMANS; PROTEIN MULTIMERIZATION; PROTEIN STRUCTURE, SECONDARY;

EID: 77951235871     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.22675     Document Type: Article

References (36)

1. Ulmasov B, Bruno J, Gordon N, Hartnett ME, Edwards JC. Chloride intracellular channel protein-4 functions in angiogenesis by supporting acidification of vacuoles along the intracellular tubulogenic pathway. Am. J Pathol 2009;174:1084-1096.
2. Valenzuela. SM, Martin DK, Por SB, Robbins JM, Warton K, Bootcov MR, Schofield PR, Campbell TJ, Breit SN. Molecular cloning and expression of a chloride ion channel of cell nuclei. J Biol Chem 1997;272:12575-12582. (Pubitemid 27203351)
3. Nishizawa. T, Nagao T, Iwatsubo T, Forte JG, Urushidani. T. Molecular cloning and characterization of a novel chloride intracellular channel-related protein, parchorin, expressed in water-secreting cells. J Biol Chem 2000(275:11164-11173. (Pubitemid 30212760)
4. Fernandez-Salas E, Sagar M, Cheng C, Yuspa SH, Weinberg WC. p53 and tumor necrosis factor alpha regulate the expression of a mitochondrial chloride channel protein. J Biol Chem 1999(274: 36488-36497. (Pubitemid 30005257)
5. Berry KL, Bulow HE, Hall DH, Hobert O. A C. elegans CLIC-like protein required for intracellular tube formation and maintenance. Science 2003;302:2134-2137.
6. Schlesinger PH, Blair HC, Teitelbaum SL, Edwards JC. Characterization of the osteoclast ruffled border chloride channel and its role in bone resorption. J Biol Chem 1997;272:18636-18643.
7. Landry D, Sullivan S, Nicolaides M, Redhead C, Edeiman A, Field M, Al-Awqati Q, Edwards J. Molecular cloning and characterization of p64, a chloride channel protein from, kidney microsomes. J Biol Chem 1993;268:14948-14955. (Pubitemid 23206643)
8. Landry DW, Akabas MH, Redhead C, Edelman A, Cragoe EJ, Jr, AlAwqati Q, Purification and reconstitution of chloride channels from, kidney and trachea. Science .1989;244:1469-1472. (Pubitemid 19171679)
9. Redhead CR, Edelman. AE, Brown D, Landry DW, al-Awqati Q. A ubiquitous 64-kDa protein is a component of a chloride channel of plasma, and intracellular membranes. Proc Natl Acad Sei USA. 1992;89:3716-3720.
10. Cromer BA, Gorman MA, Hansen. G, Adams JJ, Coggan M, Littler DR, Brown LJ, Mazzanti M, Breit SN, Curmi PM, Dulhunty AF, Board PG, Parker MW. Structure of the Janus protein human CLIC2. J Mol Biol 2007;374:719-731. (Pubitemid 350018766)
11. Littler DR, Harrop SJ, Brown LJ, Pankhurst GJ, Mynott AV, Luciani P, Mandyam RA, Mazzanti M, Tanda S, Berryman MA, Breit SN, Curmi PM. Comparison of vertebrate and invertebrate CLIC proteins: the crystal structures of Caenorhabditis elegans EXC-4 and. Drosophila melanogaster DmCLIC. Proteins 2008;71:364-378.
12. Littler DR, Harrop SJ, Fairlie WD, Brown LJ, Pankhurst GJ, Pankhurst S, DeMaere MZ, Campbell TJ, Bauskin AR, Tonini R, Mazzanti M, Breit SN, Curmi PM. The intracellular chloride ion channel protein CLICl undergoes a redox-controlled structural transition. J Biol Chem. 2004;279:9298-9305. (Pubitemid 38295993)
13. Singh H, Ashley RH. CLIC4 (p64H1) and its putative transmembrane domain form poorly selective, redox-regulated ion channels. Mol Membr Biol. 2007(24:41-52.
14. TuIk BM, Kapadia S, Edwards JC. CLICl inserts from the aqueous phase into phospholipid membranes, where it functions as an anion channel. Am J Physiol Cell Physiol 2002;282:C1103-C1112. (Pubitemid 34663119)
15. Tonini R, Ferroni A, Valenzuela SM, Warton K, Campbell TJ, Breit SN, Mazzanti M, Functional characterization of the NCC27 nuclear protein, in stable transfected CHO-Kl cells. Faseb J 2000; 14:11711178. (Pubitemid 30350399)
16. Qian Z, Okuhara D, Abe MK, Rosner MR. Molecular cloning and characterization of a mitogen-activated protein kinase-associated intracellular chloride channel. J Biol Chem 1999;274:1621-1627. (Pubitemid 129507755)
17. Money TT, King RG, Wong MH, Stevenson JL, Kalionis B, Erwich JJ, Huisman MA, Timmer A, Hiden U, Desoye G, Gude NM. Expression and cellular localisation of chloride intracellular channel 3 in human placenta and fetal membranes. Placenta 2007;28:429-436. (Pubitemid 46593776)
18. Tomarev SI, Zinovieva RD, Piatigorsky J. Characterization of squid crystallin genes. Comparison with mammalian glutathione-S-transferase genes. J Biol Chem 1992;267:8604-8612.
19. Coceo R, Stenberg G, Dragani B, Rossi Principe D, Paludi D, Mannervik B, Aceto A. The folding and stability of human alpha class glutathione transferase Al-1 depend on distinct roles of a conserved N-capping box and hydrophobic staple motif. J Biol Chem 2001;276:32177-32183. (Pubitemid 37384880)
20. Littler DR, Assaad NN, Harrop SJ, Brown LJ, Pankhurst GJ, Luciani P, Aguilar MI, Mazzanti M, Berryman MA, Breit SN, Curmi PM. Crystal structure of the soluble form of the redox-regulated chloride ion channel protein CLIC4. Febs J 2005;272:4996-5007. (Pubitemid 41415122)
21. Murshudov GN, Vagin AA, Dodson EJ. Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr D Biol Crystallogr 1997;53(Part 3):240-255.
22. Emsley P, Cowtan K. Coot; model-building tools for molecular graphics. Acta Crystallogr D Biol Crystallogr 2004;60(Part 12, Part 1): 2126-2132. (Pubitemid 41742764)
23. Zwart PH, Afemine PV, Grosse-Kunstleve RW, Hung LW, Ioerger TR, McCoy AJ, McKee E, Moriarty NW, Read RJ, Sacchettini JC, Sauter NK, Storoni LC, Terwilliger TC, Adams PD. Automated structure solution with the PHENIX suite. Methods Mol Biol 2008;426:419-435.
24. Harrop SJ, DeMaere MZ, Fairlie WD, Reztsova T, Valenzuela SM, Mazzanti M, Tonini R, Qiu MR, Jankova L, Warton K, Bauskin AR, Wu WM, Pankhurst S, Campbell TJ, Breit SN, Curmi PM. Crystal structure of a soluble form of the intracellular chloride ion channel CLICl (NCC27) at 14-A resolution. J Biol Chem 2001(276:4499345000.
25. Xia B, Vlamis-Gardikas A, Holmgren A, Wright PE, Dyson HJ. Solution structure of Escherichia coli glutaredoxin-2 shows similarity to mammalian glutethione-S-transferases. J Mol Biol 2001;310:907-918.
26. Whitbread AK, Masoumi A, Tetlow N, Schmuck E, Coggan M, Board PG. Characterization of the omega class of glutathione transferases. Methods Enzymol 2005;401:78-99. (Pubitemid 43052387)
27. Blackburn AC, Coggan M, Tzeng HF, Lantum H, Polekhina G, Parker MW, Anders MW, Board PG. GSTZId: a new allele of glutathione transferase zeta and maleyiacetoacetate isomerase. Pharmacogenetics 2001;11:671-678. (Pubitemid 33078236)
28. Polekhina G, Board PG, Blackburn AC, Parker MW. Crystal structure of maleyiacetoacetate isomerase/glutathione transferase zeta reveals the molecular basis for its remarkable catalytic promiscuity. Biochemistry 2001;40:1567-1576. (Pubitemid 32144025)
29. Bousset L, Belrhali H, Janin J, Melki R, Morera S. Structure of the globular region of the prion protein Ure2 from the yeast Saccharomyces cerevisiae. Structure 2001;9:39-46.
30. Morris MJ, Craig SJ, Sutherland TM, Board PG, Casarotto MG. Transport of glutathione transferase-fold structured proteins into living cells. Biochim Biophys Acta 2009;1788:676-685.
31. Pan JL, Bardwell JC. The origami of thioredoxin-like folds. Protein Sci 2006;15:2217-2227.
32. Ponsioen B, van Zeijl L, Langeslag M, Berryman M, Littler D, Jalink K, Moolenaar WH. Spatiotemporal regulation of chloride intracellular channel protein CLIC4 by RhoA. Mol Biol Cell 2009(20:46644672.
33. Mi W, Liang YH, Li L, Su XD. The crystal structure of human chloride intracellular channel protein 2: a disulfide bond with functional implications. Proteins 2008;71:509-513. (Pubitemid 351358629)
34. Board PG, Coggan M, Chelvanayagam G, Easteal S, Jermiin LS, Schulte GK, Danky DE, Hoth LR, Griffor MC, Kamath AV, Rosner MH, Chrunyk BA, Perregaux DE, Gabel CA, Geoghegan KF, Pandit J. Identification, characterization, and crystal structure of the Omega class glutathione transferases. J Biol Chem 2000; 275:24798-24806. (Pubitemid 30626584)
35. Li Y, Li D, Zeng Z, Wang D. Trimeric structure of the wild, soluble chloride intracellular ion channel CL1C4 observed in crystals. Biochem Biophys Res Commun 2006;343:1272-1278.
36. Krissinei E, Henrick K. Inference of macromolecular assemblies from crystalline state. J Mol Biol 2007;372:774-797. (Pubitemid 47321791)