Expression of interest: Transcriptomics and the designation of conservation units

Molecular Ecology

Volumn 19, Issue 9, 2010, Pages 1757-1759

  Hansen, Michael M ^a  

^a AARHUS UNIVERSITY   (Denmark)

Author keywords

Adaptation; Conservation genetics; Ecological genetics; Fish; Transcriptomics

Indexed keywords

MICROSATELLITE DNA;

ANIMAL; ATLANTIC SALMON; ENVIRONMENTAL PROTECTION; GENE EXPRESSION PROFILING; GENETICS; POPULATION GENETICS; REVIEW;

ANIMALS; CONSERVATION OF NATURAL RESOURCES; GENE EXPRESSION PROFILING; GENETICS, POPULATION; MICROSATELLITE REPEATS; SALMO SALAR;

SALMO SALAR;

EID: 77951159597     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2010.04597.x     Document Type: Review

References (22)

1. Aubin-Horth N, Renn SCP (2009) Genomic reaction norms: using integrative biology to understand molecular mechanisms of phenotypic plasticity. Molecular Ecology, 18, 3763 3780.
2. Crandall KA, Bininda-Emonds ORP, Mace GM, Wayne RK (2000) Considering evolutionary processes in conservation biology. Trends in Ecology & Evolution, 15, 290 295.
3. Derome N, Duchesne P, Bernatchez L (2006) Parallelism in gene transcription among sympatric lake whitefish (Coregonus clupeaformis Mitchill) ecotypes. Molecular Ecology, 15, 1239 1249.
4. Fay JC, Wittkopp PJ (2008) Evaluating the role of natural selection in the evolution of gene regulation. Heredity, 100, 191 199.
5. Fraser DJ, Bernatchez L (2001) Adaptive evolutionary conservation: towards a unified concept for defining conservation units. Molecular Ecology, 10, 2741 2752.
6. Fraser DJ, Jones MW, McParland TL, Hutchings JA (2007a) Loss of historical immigration and the unsuccessful rehabilitation of extirpated salmon populations. Conservation Genetics, 8, 527 546.
7. Fraser DJ, Weir LK, Darwish TL, Eddington JD, Hutchings JA (2007b) Divergent compensatory growth responses within species: linked to contrasting migrations in salmon? Oecologia, 153, 543 553.
8. Giger T, Excoffier L, Day PJR et al. (2006) Life history shapes gene expression in salmonids. Current Biology, 16, R281 R282.
9. Hansen MM, Fraser DJ, Als TD, Mensberg KLD (2008) Reproductive isolation, evolutionary distinctiveness and setting conservation priorities: the case of European lake whitefish and the endangered North Sea houting (Coregonus spp.). BMC Evolutionary Biology, 8, 137.
10. Larsen PF, Nielsen EE, Williams TD et al. (2007) Adaptive differences in gene expression in European flounder (Platichthys flesus). Molecular Ecology, 16, 4674 4683.
11. Leinonen T, O'Hara RB, Cano JM, Merilä J (2008) Comparative studies of quantitative trait and neutral marker divergence: a meta-analysis. Journal of Evolutionary Biology, 21, 1 17.
12. Luikart G, England PR, Tallmon D, Jordan S, Taberlet P (2003) The power and promise of population genomics: from genotyping to genome typing. Nature Reviews Genetics, 4, 981 994.
13. Namroud MC, Beaulieu J, Juge N, Laroche J, Bousquet J (2008) Scanning the genome for gene single nucleotide polymorphisms involved in adaptive population differentiation in white spruce. Molecular Ecology, 17, 3599 3613.
14. Normandeau E, Hutchings JA, Fraser DJ, Bernatchez L (2009) Population-specific gene expression responses to hybridization between farm and wild Atlantic salmon. Evolutionary Applications, 2, 489 503.
15. Reed DH, Frankham R (2001) How closely correlated are molecular and quantitative measures of genetic variation? A meta-analysis Evolution, 55, 1095 1103.
16. ST scan in diverging Atlantic salmon subpopulations. Genetics, 177, 1011 1022.
17. Roelofs D, Janssens TKS, Timmermans MJTN et al. (2009) Adaptive differences in gene expression associated with heavy metal tolerance in the soil arthropod Orchesella cincta. Molecular Ecology, 18, 3227 3239.
18. Tymchuk W, O'Reilly PT, Bittman J, MacDonald D, Schulte P (2010) Conservation genomics of Atlantic salmon: variation in gene expression between and within regions of the Bay of Fundy. Molecular Ecology, 19, 1842 1859.
19. Vasemägi A, Nilsson J, Primmer CR (2005) Expressed sequence tag-linked microsatellites as a source of gene-associated polymorphisms for detecting signatures of divergent selection in Atlantic salmon (Salmo salar L.). Molecular Biology and Evolution, 22, 1067 1076.
20. Waples RS (1991) Pacific Salmon, Oncorhynchus spp. & the definition of 'species' under the endangered species act. Marine Fisheries Reviews, 53, 11 22.
21. Whitehead A, Crawford DL (2006) Neutral and adaptive variation in gene expression. Proceedings of the National Academy of Sciences of the United States of America, 103, 5425 5430.
22. Whiteley AR, Derome N, Rogers SM et al. (2008) The phenomics and expression quantitative trait locus mapping of brain transcriptomes regulating adaptive divergence in lake whitefish species pairs (Coregonus sp.). Genetics, 180, 147 164.