Spectral fluorometric characterization of phytoplankton community composition using the Algae Online Analyser®

Water Research

Volumn 44, Issue 8, 2010, Pages 2461-2472

  Richardson, Tammi L ^a   Lawrenz, Evelyn ^a   Pinckney, James L ^a   Guajardo, Rodney C ^b   Walker, Elyse A ^a   Paerl, Hans W ^b   MacIntyre, Hugh L ^c  

^a UNIVERSITY OF SOUTH CAROLINA   (United States)

^b University of North Carolina at Chapel Hill   (United States)

^c DAUPHIN ISLAND SEA LAB   (United States)

Author keywords

AOA; Community structure; Continuous monitoring; Spectral fluorescence

Indexed keywords

FLUORESCENCE QUENCHING; IMAGE SEGMENTATION; PHYTOPLANKTON;

ALGA ONLINE ANALYSER; BIOMASS COMPOSITIONS; COMMUNITY COMPOSITION; COMMUNITY STRUCTURES; CONTINUOUS MONITORING; FIXED WAVELENGTH; PHYTOPLANKTON BIOMASS; PHYTOPLANKTON COMMUNITY; SOUTH CAROLINA; SPECTRAL FLUORESCENCE;

CALIBRATION;

CHLOROPHYLL A;

ALGAL BLOOM; BIOMASS; COMMUNITY COMPOSITION; DETECTION METHOD; EARLY WARNING SYSTEM; FLUOROMETRY; LIGHT INTENSITY; NUTRIENT AVAILABILITY; PHYTOPLANKTON;

ALGAE ONLINE ANALYZER; ALGAL BLOOM; ALGAL COMMUNITY; ANALYZER; ARTICLE; BIOMASS; CONTROLLED STUDY; ENVIRONMENTAL MONITORING; GREEN ALGA; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; INTERMETHOD COMPARISON; LIGHT INTENSITY; NONHUMAN; NUTRIENT; ONLINE SYSTEM; PHYTOPLANKTON; PRIORITY JOURNAL; SPECTROFLUOROMETRY; STRAMENOPILE; UNITED STATES;

NEUSE ESTUARY; NORTH CAROLINA; NORTH INLET; SOUTH CAROLINA; UNITED STATES;

ALGAE; CHLOROPHYTA; CHROMOPHYTA; CYANOBACTERIA;

EID: 77950928605     PISSN: 00431354     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.watres.2010.01.012     Document Type: Article

References (54)

1. Alpine A., Cloern J.E. Differences in in vivo fluorescence yield between three phytoplankton size classes. Journal of Plankton Research 1985, 7:381-390.
2. Beutler M., Wiltshire K.H., Meyer B., Moldaenke C., Lüring C.M., Meyerhöfer M., Hansen U.P., Dau H. A fluorometric method for the differentiation of algal populations in vivo and in situ. Photosynthesis Research 2002, 72:39-53.
3. Boyer J.N., Christian R.R., Stanley D.W. Patterns of phytoplankton primary productivity in the Neuse River Estuary, North Carolina. USA. Marine Ecology Progress Series 1993, 97:287-297.
4. Chekalyuk A., Hafez M. Advanced laser fluorometry of natural aquatic environments. Limnology and Oceanography Methods 2008, 6:591-609.
5. Christian R.R., Boyer J.N., Stanley D.W. Multi-year distribution patterns of nutrients within the Neuse River Estuary, North Carolina. Marine Ecology Progress Series 1991, 71:259-274.
6. Cullen J.J., Ciotti A.M., Davis R.F., Lewis M.R. Optical detection and assessment of algal blooms. Limnology and Oceanography 1997, 42:1223-1239.
7. Desiderio R.A., Moore C.C., Lantz C., Cowles T.J. Multiple excitation fluorometer for in situ oceanographic applications. Applied Optics 1997, 36:1289-1296.
8. Ensign S.H., Paerl H.W. Development of an unattended estuarine nutrient monitoring program using ferries as data-collection platforms. Limnology and Oceanography Methods 2006, 4:399-405.
9. Falkowski P., Kiefer D.A. Chlorophyll a fluorescence in phytoplankton: relationship to photosynthesis and biomass. Journal of Plankton Research 1985, 7:715-731.
10. Genty B., Briantais J.M., Baker N.R. The relationship between the quantum yield of photosynthetic electron transport and quenching of chlorophyll fluorescence. Biochimica Biophysica Acta 1989, 990:87-92.
11. Gregor J., Maršálek B. Freshwater phytoplankton quantification by chlorophyll a: a comparative study of in vitro, in vivo and in situ methods. Water Research 2004, 38:517-522.
12. Gregor J., Geriš R., Maršálek B., Heteša J., Marvan P. In situ quantification of phytoplankton in reservoirs using a submersible spectrofluorometer. Hydrobiologia 2005, 548:141-151.
13. Holm-Hansen O., Lorenzen C.J., Holmes R.W., Strickland J.D.H. Fluorometric determination of chlorophyll. Journale du Conseil Permanent Internationale pour l'Exploration de la Mer 1965, 30:3-15.
14. Izydorczyk K., Carpentier C., Mrówczyński J., Wagenvoort A., Jurczak T., Tarczyńska M. Establishment of an alert level framework for cyanobacteria in drinking water resources by using the Algae Online Analyser for monitoring cyanobacterial chlorophyll a. Water Research 2009, 43:989-996.
15. Jacobsen T.R., Rai H. Comparison of spectrophotometric, fluorometric and high performance liquid chromatography methods for determination of chlorophyll a in aquatic samples: effects of solvent and extraction procedures. Internationale Revue der gesamten Hydrobiologie und Hydrographie 2007, 75:207-217.
16. Phytoplankton Pigments in Oceanography: Guidelines to Modern Methods 1997, United Nations Educational, Scientific and Cultural Organization Publishing, Paris. S. Jeffery, R.S. Mantoura, S. Wright (Eds.).
17. Kiefer D.A. Fluorescence properties of natural phytoplankton populations. Marine Biology 1973, 22:263-269.
18. Kirk J.T.O. Light and Photosynthesis in Aquatic Ecosystems 1994, Cambridge University Press, Cambridge, UK.
19. Kempton J., Keppler C.J., Lewitus A.J., Shuler A., Wilde S.B. A novel Heterosigma akashiwo bloom extending from a South Carolina bay to offshore waters. Harmful Algae 2008, 7:235-240.
20. Kjerfve B. Comparative oceanography of coastal lagoons. Estuaries 1985, 8:A3.
21. Krause G.H., Weis E. Chlorophyll fluorescence and photosynthesis: the basics. Annual Review of Plant Physiology and Plant Molecular Biology 1991, 42:313-349.
22. Kulkarni N.R., White D.L., Lewitus A.J., Tymowski R.G., Yoch D.C. Dimethylsulfoniopropionate in a salt marsh estuary: correlation to tidal cycle and phytoplankton assemblage composition. Marine Ecology Progress Series 2005, 289:13-25.
23. Leboulanger C., Dorigo U., Jacquet S., Le Berre B., Paolini G., Humbert J.F. Application of a submersible spectrofluorometer for rapid monitoring of freshwater cyanobacterial blooms: a case study. Aquatic Microbial Ecology 2002, 30:83-89.
24. Lewitus A.J., Koepfler E.T., Morris J.T. Seasonal variation in the regulation of phytoplankton by nitrogen and grazing in a salt-marsh estuary. Limnology and Oceanography 1998, 43:636-646.
25. Lewitus A.J., White D.L., Tymowski R.G., Geesey M.E., Hymel S.N., Noble P.A. Adapting the CHEMTAX method for assessing phytoplankton taxonomic composition in Southeastern US. Estuaries 2005, 28:160-172.
26. Loftus M.E., Seliger H.H. Some limitations of the in vivo fluorescence technique. Chesapeake Science 1975, 16:79-92.
27. Lorenzen C.J. A method for the continuous measurement of in vivo chlorophyll concentration. Deep-Sea Research 1966, 13:223-227.
28. MacIntyre, H.L., Lawrenz, E., Richardson, T.L., Taxonomic discrimination of phytoplankton by spectral fluorescence. In: Suggett, D.J., Prasil, O., Borowitzka, M.A. (Eds.), Chlorophyll a Fluorescence in Aquatic Sciences: Methods and Applications. Springer, in press.
29. Mackey M.D., Mackey D.J., Higgins H.W., Wright S.W. CHEMTAX - a program for estimating class abundances from chemical markers: application to HPLC measurements of phytoplankton. Marine Ecology Progress Series 1996, 144:265-283.
30. Meyns S., Illi R., Ribi B. Comparison of chlorophyll-a analysis by HPLC and spectrophotometry: where do the differences come from?. Archiv für Hydrobiologie 1994, 132:129-139.
31. Millie D.F., Schofield O.M., Kirkpatrick G.J., Johnsen G., Tester P.A., Vinyard B.T. Detection of harmful algal blooms using photopigments and absorption signatures: a case study of the Florida red tide dinoflagellate, Gymnodinium breve. Limnology and Oceanography 1997, 42:1240-1251.
32. Millie D.F., Schofield O.M.E., Kirkpatrick G.J., Johnsen G., Evens T.J. Using absorbance and fluorescence spectra to discriminate microalgae. European Journal of Phycology 2002, 37:313-322.
33. Noble P.A., Tymowski R.G., Fletcher M., Morris J.T., Lewitus A.J. Contrasting patterns of phytoplankton community pigment composition in two salt marsh estuaries in southeastern United States. Applied and Environmental Microbiology 2003, 69:4129-4143.
34. Petersen W., Wehde H., Krasemann H., Colijn F., Schroeder F. FerryBox and MERIS - assessment of coastal and shelf sea ecosystems by combining in situ and remotely sensed data. Estuarine, Coastal and Shelf Science 2008, 77:296-307.
35. 14C-labeled microalgal photosynthetic pigments. Journal of Plankton Research 1996, 18:1867-1880.
36. Pinckney J.L., Paerl H.W., Harrington M.B., Howe K.E. Annual cycles of phytoplankton community structure and bloom dynamics in the Neuse River Estuary, North Carolina. Marine Biology 1998, 131:371-381.
37. Poryvkina L., Babichenko S., Kaitala S., Kuosa H., Shalapjonok A. Spectral fluorescence signature in the characterization of phytoplankton community composition. Journal of Plankton Research 1994, 16:1315-1327.
38. Richardson T.L., Pinckney J.L. Monitoring of the toxic dinoflagellate Karenia brevis using gyroxanthin-based detection methods. Journal of Applied Phycology 2004, 16:315-328.
39. Rowan K.S. Photosynthetic Pigments of Algae 1989, Cambridge Univ Press, Cambridge, 334 pp.
40. Schofield O., Grzymski J., Bissett W.P., Kirkpatrick G.J., Millie D.F., Moline M., Roesler C.S. Optical monitoring and forecasting systems for harmful algal blooms: possibility or pipe dream?. Journal of Phycology 1999, 35:1477-1496.
41. Seppälä J., Balode M. The use of spectral fluorescence methods to detect changes in the phytoplankton community. Hydrobiologia 1998, 363:207-217.
42. Seppälä J., Ylöstalo P., Kaitala S., Hällfors S., Raateoj S., Maunula P. Ship-of-opportunity based phycocyanin fluorescence monitoring of the filamentous cyanobacteria bloom dynamics in the Baltic Sea. Estuarine, Coastal and Shelf Science 2007, 73:489-500.
43. Seppälä J., Olli K. Multivariate analysis of phytoplankton spectral in vivo fluorescence: estimation of phytoplankton biomass during a mesocosm study in the Baltic Sea. Marine Ecology Progress Series 2008, 370:69-85.
44. Strickland J.D.H. Continuous measurement of in vivo chlorophyll; a precautionary note. Deep-Sea Research 1968, 15:225-227.
45. Utermöhl, H., 1958. Zur Vervollkommung der Quantitativen Phytoplankton-Methodik. Mitt Int Ver Limnol, p. 38.
46. Vernberg F.J., Vernberg W.B., Blood E., Fortner A., Fulton M., McKellar H., Michener W., Scott G., Siewicki T., Elfigi K. Impact of urbanization on high-salinity estuaries in the southeastern United-States. Netherlands Journal of Sea Research 1992, 30:239-248.
47. Vincent W.F. Mechanisms of rapid photosynthetic adaptation in natural phytoplankton communities. I. Redistribution of excitation energy between photosystems I and II. Journal of Phycology 1979, 15:429-434.
48. Vincent W.F. Mechanisms of rapid photosynthetic adaptation in natural phytoplankton communities. II. Changes in photochemical capacity as measured by DCMU-induced chlorophyll fluorescence. Journal of Phycology 1980, 16:568-577.
49. Wetz M.S., Hayes K.C., Lewitus A.J., Wolny J.L., White D.L. Variability in phytoplankton pigment biomass and taxonomic composition over tidal cycles in a salt marsh estuary. Marine Ecology Progress Series 2006, 320:109-120.
50. White D.L., Porter D.E., Lewitus A.J. Spatial and temporal analyses of water quality and phytoplankton biomass in an urbanized versus a relatively pristine salt marsh estuary. Journal of Experimental Marine Biology and Ecology 2004, 298:255-273.
51. Wright S.W., Jeffrey S.W., Mantoura R.F.C., Llewellyn C.A., Bjørnland T., Repeta D.J., Welschmeyer N.A. Improved HPLC method for the analysis of chlorophylls and carotenoids from marine phytoplankton. Marine Ecology Progress Series 1991, 77:183-196.
52. Yentsch C.S., Menzel D.W. A method for the determination of phytoplankton chlorophyll and phaeophytin by fluorescence. Deep-Sea Research 1963, 10:221-231.
53. Yentsch C.S., Phinney D.A. Spectral fluorescence - an ataxonomic tool for studying the structure of phytoplankton populations. Journal of Plankton Research 1985, 7:617-632.
54. Yentsch C.S., Yentsch C.M. Fluorescence spectral signatures - characterization of phytoplankton populations by the use of excitation and emission spectra. Journal of Marine Research 1979, 37:471-483.