Identification of single nucleotide polymorphisms in the ovine acetyl-CoA carboxylase-alpha gene

Small Ruminant Research

Volumn 90, Issue 1-3, 2010, Pages 34-40

  García Fernández, Marta ^a   Gutiérrez Gil, Beatriz ^a   Garcia Gámez, Elsa ^a   Arranz, Juan J ^a  

^a UNIVERSITY OF LEÓN   (Spain)

Author keywords

Acetyl CoA carboxylase; Genetic variability; Sheep; Single nucleotide polymorphisms

Indexed keywords

ANIMALIA; OVIS; OVIS ARIES;

EID: 77950627468     PISSN: 09214488     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.smallrumres.2009.12.010     Document Type: Article

References (34)

1. Assenat, L., 1985. Le lait de brebis: composition et propriétés. In: Laits et Produits Laitiers: Vache, Brebis, Chèvre". F.M. Luquet (Ed). Technique et Documentation Lavoisier, Paris, France, 685 pp.
2. Badaoui B., Serradilla J.M., Tomas A., Urrutia B., Ares J.L., and Carrizosa J. Goat acetyl-coenzyme a carboxylase α: molecular characterization, polymorphism and association with milk traits. J. Dairy Sci. 90 (2007) 1039-1043
3. Barber M.C., and Travers M.T. Cloning and characterization of multiple acetyl-CoA carboxylase transcripts in ovine adipose tissue. Gene 154 (1995) 271-275
4. Barber M.C., and Travers M.T. Elucidation of a promoter activity that directs the expression of acetyl-CoA carboxylase α with an alternative N-terminus in a tissue-restricted fashion. Biochem. J. 333 (1998) 17-25
5. Barber M.C., Pooley L., and Travers M.T. Developmental regulation of alternatively spliced acetyl-CoA carboxylase-alpha mRNA encoding isozymes with or without an eight amino acid domain upstream of the Serine-1200 phosphorylation motif in the mammary gland. J. Mol. Endocrinol. 27 (2001) 349-356
6. Barber M.C., Price N.T., and Travers M.T. Structure and regulation of acetyl-CoA carboxylase genes of metazoa. Biochim. Biophys. Acta 1733 (2005) 1-28
7. Barber M.C., Clegg R.A., Travers M.T., and Vernon R.G. Lipid metabolism in the lactating mammary gland. Biochim. Biophys. Acta 1347 (1997) 101-126
8. Bauman D.E., Mather I.H., Wall R.J., and Lock A.L. Major advances associated with the biosynthesis of milk. J. Dairy Sci. 89 (2006) 1235-1243
9. Carta A., Casu S., Usai M.G., Addis M., Fiori M., Fraghì A., Miari S., Mura L., Piredda G., Schibler L., Sechi T., Elsen J.M., and Barillet F. Investigating the genetic component of fatty acid content in sheep milk. Small Rumin. Res. 79 (2008) 22-28
10. Chilliard Y., Ferlay A., Mansbridge R.M., and Doreau M. Ruminant milk fat plasticity: nutritional control of saturated, polyunsaturated, trans and conjugated fatty acids. Ann. Zootechnol. 49 (2000) 181-205
11. Davies S.P., Sim A.T., and Hardie D.G. Location and function of three sites phosphorylated on rat acetyl-CoA carboxylase by the AMP-activated protein kinase. Eur. J. Biochem. 187 (1990) 183-190
12. den Dunnen J.T., and Antonarakis S.E. Mutation nomenclature extensions and suggestions to describe complex mutations: a discussion. Hum. Mutat. 15 (2000) 7-12
13. Gallardo D., Quintanilla R., Varona L., Díaz I., Ramírez O., Pena R.N., and Amills M. Polymorphism of the pig acetyl-coenzyme A carboxylase α; gene is associated with fatty acid composition in a Duroc commercial line. Anim. Genet. 40 (2009) 410-417
14. García-Fernández M., Gutiérrez-Gil B., García-Gámez E., and Arranz J.-J. Genetic variability of the Stearoyl-CoA desaturase gene in sheep. Mol. Cell Probes 23 (2009) 107-111
15. Jandal J.M. Comparative aspects of goat and sheep milk. Small Rumin. Res. 22 (1996) 177-185
16. Kim K.H., Lopez-Casillas F., Bai D.H., Luo X., and Pape M.E. Role of reversible phosphorylation of acetyl-CoA carboxylase in long-chain fatty acid synthesis. FASEB J. 3 (1989) 2250-2256
17. Kong I.S., Lopez-Casillas F., and Kim K.H. Acetyl-coenzyme A carboxylase mRNA species with or without inhibitory coding sequence for Ser-1200 phosphorylation. J. Biol. Chem. 265 (1990) 13695-13701
18. Leonard A.E., Pereira S.L., Sprecher H., and Huang Y.S. Elongation of long-chain fatty acids. Prog. Lipid Res. 43 (2004) 36-54
19. Lopez-Casillas F., Ponce-Castaneda M.V., and Kim K.H. In vivo regulation of the activity of the two promoters of the rat acetyl coenzyme-A carboxylase gene. Endocrinology 129 (1991) 1049-1058
20. Mao J., Marcos S., Davis S.K., Burzlaff J., and Seyfert H.-M. Genomic distribution of three promoters of the bovine gene encoding acetyl-CoA carboxylase alpha and evidence that the nutritionally regulated promoter I contains a repressive element different from that in rat. Biochem. J. 358 (2001) 127-135
21. Miller S.A., Dikes D.D., and Polesky H.F. A simple salting-out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res. 16 (1988) 1215
22. Moioli B., Napolitano F., Orru L., and Catillo G. Single nucleotide polymorphism detection in promoter III of the acetyl-CoA carboxylase α gene in sheep. J. Anim. Breed. Genet. 122 (2005) 418-420
23. Moioli B., Napolitano F., Orru L., and Catillo G. Single nucleotide polymorphism detection in promoter I of the acetyl-CoA carboxylase α gene in sheep. Small Rumin. Res. 59 (2005) 49-53
24. Muñoz G., Alves E., Fernández A., Ovilo C., Barragán C., Estellé J., Quintanilla R., Folch J.M., Silió L., Rodríguez M.C., and Fernández A.I. QTL detection on porcine chromosome 12 for fatty-acid composition and association analyses of the fatty acid synthase, gastric inhibitory polypeptide and acetyl-coenzyme A carboxylase alpha genes. Anim. Genet. 38 (2007) 639-646
25. Oracová M., Margetín M., Peškovičová D., Daňo J., Milerski M., Hetényi L., and Polák P. Factors affecting ewés milk fat and protein content and relationships between milk yield and milk components. Crezch. J. Anim. Sci. 52 (2007) 189-198
26. Palmquist D.L., Beaulieu A.D., and Barbano D.M. Feed and animal factors influencing milk fat composition. J. Dairy Sci. 76 (1993) 1753-1771
27. Salles J., Sargueil F., Knoll-Gellida A., Witters L.A., Casagne C., and Garbay B. Acetyl-CoA carboxylase and SREBP expression during peripheral nervous system myelitation. Biochim. Biophys. Acta 1631 (2003) 229-238
28. Sambrook J., Fritsch E.F., and Maniatis T. Molecular cloning. A Laboratory Manual. second edition vols. 1-3 (1989), Cold Spring Harbor Laboratory Press, New York
29. Sanchez J.P., San Primitivo F., Barbosa E., Varona L., and de la Fuente L.F. Genetic determination of fatty acid composition in Spanish Churra sheep milk. J. Dairy Sci. 93 (2010) 330-339
30. Smith S., Witkowski A., and Joshi A.K. Structural and functional organization of the animal fatty acid synthase. Prog. Lipid Res. 42 (2003) 289-317
31. Travers M.T., Vallance A.J., Gourlay H.T., Gill C.A., Klein I., Bottema C.B., and Barber M.C. Promoter I of the acetyl-CoA carboxylase α gene: an E-box motif at -114 in the proximal promoter binds upstream stimulatory factor (USF)-1 and (USF-2) and acts as an insulin-response sequence in differentiating adipocytes. Biochem. J. 359 (2001) 273-284
32. Watkins P.A., Tarlow D.M., and Lane M.D. Mechanism for acute control of fatty acid synthesis by glucagon and 3′:5′-cyclic AMP in the liver cell. Proc. Natl. Acad. Sci. U.S.A. 74 (1977) 1497-1501
33. World Health Organization, 2003. Population nutrient intake goals for preventing diet-related chronic diseases. Report of a Joint WHO/FAO Expert Consultation. (WHO technical report series; 916). World Health Organization. Geneva. Switzerland. Available at ftp://ftp.fao.org/docrep/fao/005/ac911e/ac911e02.pdf.
34. Wigginton J.E., Cutler D.J., and Abecasis G.R. A note on exact test of Hardy-Weinberg equilibrium. Am. J. Hum. Genet. 76 (2005) 887-893