Cryobacterium roopkundense sp. nov., a psychrophilic bacterium isolated from glacial soil

International Journal of Systematic and Evolutionary Microbiology

Volumn 60, Issue 4, 2010, Pages 866-870

  Reddy, G S N ^a   Pradhan, Suman ^a   Manorama, Ruth ^a   Shivaji, S ^a  

^a CENTRE FOR CELLULAR AND MOLECULAR BIOLOGY   (India)

Author keywords

[No Author keywords available]

Indexed keywords

2,4 DIAMINOBUTYRIC ACID; CARDIOLIPIN; FATTY ACID; LIPID; MENAQUINONE; PEPTIDOGLYCAN; PHOSPHATIDYLGLYCEROL; RNA 16S;

ARTICLE; BACTERIAL GENE; BACTERIAL GROWTH; BACTERIAL STRAIN; CONTROLLED STUDY; CRYOBACTERIUM MESOPHILUM; CRYOBACTERIUM PSYCHROPHILUM; CRYOBACTERIUM PSYCHROTOLERANS; CRYOBACTERIUM ROOPKUNDENSE; GENOTYPE; GENUS; GLACIER; GRAM POSITIVE BACTERIUM; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; PSYCHROPHILIC BACTERIUM; SEQUENCE HOMOLOGY; SOIL MICROFLORA; TEMPERATURE;

ACTINOMYCETALES; BACTERIAL TYPING TECHNIQUES; COLD TEMPERATURE; DNA, RIBOSOMAL; FATTY ACIDS; GENES, RRNA; GENOTYPE; ICE COVER; INDIA; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHENOTYPE; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SOIL MICROBIOLOGY; SPECIES SPECIFICITY;

BACTERIA (MICROORGANISMS); CRYOBACTERIUM; CRYOBACTERIUM PSYCHROPHILUM; POSIBACTERIA;

EID: 77950607717     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.011775-0     Document Type: Article

References (20)

1. Collins, M. D., Pirouz, T., Goodfellow, M. & Minnikin, D. E. (1977). Distribution of menaquinones in actinomycetes and corynebacteria. J Gen Microbiol 100, 221-230.
2. Dastager, S. G., Lee, J.-C., Ju, Y.-J., Park, D. J. & Kim, C.-J. (2008). Cryobacterium mesophilum sp. nov., a novel mesophilic bacterium. Int J Syst Evol Microbiol 58, 1241-1244.
3. Inoue, K. & Komagata, K. (1976). Taxonomic study on obligately psychrophilic bacteria isolated from Antarctica. J Gen Appl Microbiol 22, 165-176.
4. Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
5. Komagata, K. & Suzuki, K. (1987). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-207.
6. Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
7. Lányí, B. (1987). Classical and rapid identification methods for medically important bacteria. Methods Microbiol 19, 1-67.
8. Reddy, G. S. N., Aggarwal, R. K., Matsumoto, G. I. & Shivaji, S. (2000). Arthrobacter flavus sp. nov., a psychrophilic bacterium isolated from a pond in McMurdo Dry Valley, Antarctica. Int J Syst Evol Microbiol 50, 1553-1561.
9. Reddy, G. S. N., Prakash, J. S. S., Prabahar, V., Matsumoto, G. I., Stackebrandt, E. & Shivaji, S. (2003). Kocuria polaris sp. nov., an orange-pigmented psychrophilic bacterium isolated from an Antarctic cyanobacterial mat sample. Int J Syst Evol Microbiol 53, 183-187.
10. Reddy, G. S. N., Matsumoto, G. I., Schumann, P., Stackebrandt, E. & Shivaji, S. (2004). Psychrophilic pseudomonads from Antarctica: Pseudomonas antarctica sp. nov., Pseudomonas meridiana sp. nov. and Pseudomonas proteolytica sp. nov. Int J Syst Evol Microbiol 54, 713-719.
11. Reddy, G. S. N., Prabagaran, S. R. & Shivaji, S. (2008a). Leifsonia pindariensis sp. nov., isolated from the Pindari glacier of the Indian Himalayas, and emended description of the genus Leifsonia. Int J Syst Evol Microbiol 58, 2229-2234.
12. Reddy, G. S. N., Uttam, A. & Shivaji, S. (2008b). Bacillus cecembensis sp. nov., isolated from the Pindari glacier of the Indian Himalayas. Int J Syst Evol Microbiol 58, 2330-2335.
13. Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
14. Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
15. Suresh, K., Reddy, G. S. N., Sengupta, S. & Shivaji, S. (2004). Deinococcus indicus sp. nov., an arsenic-resistant bacterium from an aquifer in West Bengal, India. Int J Syst Evol Microbiol 54, 457-461. (Pubitemid 38443742)
16. Suzuki, K., Sasaki, J., Uramoto, M., Nakase, T. & Komagata, K. (1997). Cryobacterium psychrophilum gen. nov., sp. nov., nom. rev., comb. nov., an obligately psychrophilic actinomycete to accommodate "Curtobacterium psychrophilum" Inoue and Komagata 1976. Int J Syst Bacteriol 47, 474-478.
17. Tamaoka, J. (1986). Analysis of bacterial menaquinone mixtures by reverse-phase high-performance liquid chromatography. Methods Enzymol 123, 251-256. (Pubitemid 16045258)
18. Tamaoka, J., Katayama-Fujimura, Y. & Kuraishi, H. (1983). Analysis of bacterial menaquinone mixtures by high performance liquid chromatography. J Appl Bacteriol 54, 31-36. (Pubitemid 13082739)
19. Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
20. Zhang, D.-C., Wang, H.-X., Cui, H.-L., Yang, Y., Liu, H.-C., Dong, X.-Z. & Zhou, P.-J. (2007). Cryobacterium psychrotolerans sp. nov., a novel psychrotolerant bacterium isolated from the China No. 1 glacier. Int J Syst Evol Microbiol 57, 866-869. (Pubitemid 46711974)