Quantitative organ time activity curve extraction from rodent PET images without anatomical prior

Medical Physics

Volumn 37, Issue 4, 2010, Pages 1507-1517

  Maroy, R ^a   Boisgard, R ^a,b   Comtat, C ^a   Jego, B ^a,b   Fontyn, Y ^a   Jan, S ^a   Dubois, A ^b   Trebossen R ^a   Tavitian, B ^a,b  

^a SERVICE HOSPITALIER FRÉDÉRIC JOLIOT   (France)

^b INSERM   (France)

Author keywords

Partial volume effect; Rodent; Segmentation; Time activity curves; Whole body

Indexed keywords

ERRORS; EXTRACTION; IMAGE SEGMENTATION; MAMMALS; PHANTOMS; TRANSFER MATRIX METHOD;

ANATOMICAL INFORMATION; GEOMETRIC TRANSFER MATRIXES; NONINVASIVE CHARACTERIZATIONS; PARTIAL VOLUME EFFECT; POSITRON EMISSION TOMOGRAPHY (PET); RODENT; TIME-ACTIVITY CURVES; WHOLE BODY;

POSITRON EMISSION TOMOGRAPHY;

ANIMALIA; MUS; RODENTIA;

EID: 77950563089     PISSN: 00942405     EISSN: None     Source Type: Journal    
DOI: 10.1118/1.3327454     Document Type: Article

References (39)

1. D. K. Walker, " The use of pharmacokinetic and pharmacodynamic data in the assessment of drug safety in early drug development.," Br. J. Clin. Pharmacol. 0306-5251 58, 601-608 (2004). 10.1111/j.1365-2125.2004.02194.x (Pubitemid 39665147)
2. A. L. Kesner, M. Dahlbom, S. C. Huang, W. A. Hsueh, S. P. B. J. Czernin, M. Kreissl, H. M. Wu, and D. H. Silverman, " Semiautomated analysis of small-animal PET data.," J. Nucl. Med. 0161-5505 47, 1181-1186 (2006). (Pubitemid 47544913)
3. R. Maroy, R. Boisgard, C. Comtat, V. Frouin, P. Cathier, E. Duchesnay, F. Dolle, P. E. Nielsen, R. Trebossen, and B. Tavitian, " Segmentation of rodent whole-body dynamic PET images: An unsupervised method based on voxel dynamics.," IEEE Trans. Med. Imaging 0278-0062 27, 342-354 (2008). 10.1109/TMI.2007.905106 (Pubitemid 351324783)
4. E. J. Hoffman, S. C. Huang, and M. E. Phelps, " Quantitation in positron emission computed tomography: 1. Effect of object size.," J. Comput. Assist. Tomogr. 0363-8715 3, 299-308 (1979). (Pubitemid 9176236)
5. J. A. Aston, V. J. Cunningham, M. C. Asselin, A. Hammers, A. C. Evans, and R. N. Gunn, " Positron emission tomography partial volume correction: Estimation and algorithms.," J. Cereb. Blood Flow Metab. 0271-678X 22, 1019-1034 (2002). 10.1097/00004647-200208000-00014 (Pubitemid 34831609)
6. S. R. Bergmann, P. Herrero, J. Markham, C. J. Weinheimer, and M. N. Walsh, " Noninvasive quantitation of myocardial blood flow in human subjects with oxygen-15-labeled water and positron emission tomography.," J. Am. Coll. Cardiol. 0735-1097 14, 639-652 (1989). (Pubitemid 19229339)
7. G. D. Hutchins, J. M. Caraher, and R. R. Raylman, " A region of interest strategy for minimizing resolution distortions in quantitative myocardial PET studies.," J. Nucl. Med. 0161-5505 33, 1243-1250 (1992).
8. H. Iida, I. Yokoyama, D. Agostini, T. Banno, T. Kato, K. Ito, Y. Kuwabara, Y. Oda, T. Otake, Y. Tamura, E. Tadamura, T. Yoshida, and N. Tamaki, " Quantitative assessment of regional myocardial blood flow using oxygen-15-labeled water and positron emission tomography: A multicentre evaluation in Japan.," Eur. J. Nucl. Med. 0340-6997 27, 192-201 (2000). 10.1007/s002590050026 (Pubitemid 30102025)
9. M. A. Lodge, R. E. Carson, J. A. Carrasquillo, M. Whatley, S. K. Libutti, and S. L. Bacharach, " Parametric images of blood flow in oncology PET studies using [15O]water.," J. Nucl. Med. 0161-5505 41, 1784-1792 (2000).
10. S. L. Bacharach, S. K. Libutti, and J. A. Carrasquillo, " Measuring tumor blood flow with H(2)(15)O: Practical considerations.," Nucl. Med. Biol. 0969-8051 27, 671-676 (2000). 10.1016/S0969-8051(00)00136-0
11. K. Baete, J. Nuyts, W. Van Paesschen, P. Suetens, and P. Dupont, " Anatomical-based FDG-PET reconstruction for the detection of hypo-metabolic regions in epilepsy.," IEEE Trans. Med. Imaging 0278-0062 23, 510-519 (2004). 10.1109/TMI.2004.825623
12. J. Qi, R. M. Leahy, S. R. Cherry, A. Chatziioannou, and T. H. Farquhar, " High-resolution 3D Bayesian image reconstruction using the microPET small-animal scanner.," Phys. Med. Biol. 0031-9155 43, 1001-1013 (1998). 10.1088/0031-9155/43/4/027 (Pubitemid 28168428)
13. F. C. Sureau, A. J. Reader, C. Comtat, C. Leroy, M. J. Ribeiro, I. Buvat, and R. Trebossen, " Impact of image-space resolution modeling for studies with the high-resolution research tomograph.," J. Nucl. Med. 0161-5505 49, 1000-1008 (2008). 10.2967/jnumed.107.045351 (Pubitemid 351793442)
14. A. Chatziioannou, J. Qi, A. Moore, A. Annala, K. Nguyen, R. Leahy, and S. R. Cherry, " Comparison of 3-D maximum a posteriori and filtered backprojection algorithms for high-resolution animal imaging with microPET.," IEEE Trans. Med. Imaging 0278-0062 19, 507-512 (2000). 10.1109/42.870260
15. J. Tohka and A. Reilhac, " Deconvolution-based partial volume correction in Raclopride-PET and Monte Carlo comparison to MR-based method.," Neuroimage 1053-8119 39, 1570-1584 (2008). 10.1016/j.neuroimage. 2007.10.038
16. D. J. Rubins, W. P. Melega, G. Lacan, B. Way, A. Plenevaux, A. Luxen, and S. R. Cherry, " Development and evaluation of an automated atlas-based image analysis method for microPET studies of the rat brain.," Neuroimage 1053-8119 20, 2100-2118 (2003). 10.1016/j.neuroimage.2003.07.011 (Pubitemid 37543626)
17. M. Soret, S. L. Bacharach, and I. Buvat, " Partial-volume effect in PET tumor imaging.," J. Nucl. Med. 0161-5505 48, 932-945 (2007). 10.2967/jnumed.106.035774 (Pubitemid 46909922)
18. H. W. Muller-Gartner, J. M. Links, J. L. Prince, R. N. Bryan, E. McVeigh, J. P. Leal, C. Davatzikos, and J. J. Frost, " Measurement of radiotracer concentration in brain gray matter using positron emission tomography: MRI-based correction for partial volume effects.," J. Cereb. Blood Flow Metab. 0271-678X 12, 571-583 (1992).
19. C. C. Meltzer, J. K. Zubieta, J. M. Links, P. Brakeman, M. J. Stumpf, and J. J. Frost, " MR-based correction of brain PET measurements for heterogeneous gray matter radioactivity distribution.," J. Cereb. Blood Flow Metab. 0271-678X 16, 650-658 (1996). 10.1097/00004647-199607000-00016 (Pubitemid 26227075)
20. B. Bencherif, M. J. Stumpf, J. M. Links, and J. J. Frost, " Application of MRI-based partial-volume correction to the analysis of PET images of mu-opioid receptors using statistical parametric mapping.," J. Nucl. Med. 0161-5505 45, 402-408 (2004). (Pubitemid 47618612)
21. M. Samuraki, I. Matsunari, W. P. Chen, K. Yajima, D. Yanase, A. Fujikawa, N. Takeda, S. Nishimura, H. Matsuda, and M. Yamada, " Partial volume effect-corrected FDG PET and grey matter volume loss in patients with mild Alzheimer's disease.," Eur. J. Nucl. Med. Mol. Imaging 1619-7070 34, 1658-1669 (2007). 10.1007/s00259-007-0454-x (Pubitemid 47476921)
22. G. Giovacchini, M. T. Toczek, R. Bonwetsch, A. Bagic, L. Lang, C. Fraser, P. Reeves-Tyer, P. Herscovitch, W. C. Eckelman, R. E. Carson, and W. H. Theodore, " 5-HT 1A receptors are reduced in temporal lobe epilepsy after partial-volume correction.," J. Nucl. Med. 0161-5505 46, 1128-1135 (2005). (Pubitemid 43741074)
23. N. Boussion, M. Hatt, F. Lamare, Y. Bizais, A. Turzo, C. Cheze-Le Rest, and D. Visvikis, " A multiresolution image based approach for correction of partial volume effects in emission tomography.," Phys. Med. Biol. 0031-9155 51, 1857-1876 (2006). 10.1088/0031-9155/51/7/016
24. D. E. Gonzalez Trotter, R. M. Manjeshwar, M. Doss, C. Shaller, M. K. Robinson, R. Tandon, G. P. Adams, and L. P. Adler, " Quantitation of small-animal (124)I activity distributions using a clinical PET/CT scanner.," J. Nucl. Med. 0161-5505 45, 1237-1244 (2004). (Pubitemid 47611671)
25. B. K. Teo, Y. Seo, S. L. Bacharach, J. A. Carrasquillo, S. K. Libutti, H. Shukla, B. H. Hasegawa, R. A. Hawkins, and B. L. Franc, " Partial-volume correction in PET: Validation of an iterative postreconstruction method with phantom and patient data.," J. Nucl. Med. 0161-5505 48, 802-810 (2007). (Pubitemid 47604982)
26. D. Strul and B. Bendriem, " Robustness of anatomically guided pixel-by-pixel algorithms for partial volume effect correction in positron emission tomography.," J. Cereb. Blood Flow Metab. 0271-678X 19, 547-559 (1999). 10.1097/00004647-199905000-00009 (Pubitemid 30159817)
27. N. Handa, Y. Magata, E. Tadamura, T. Mukai, T. Nishina, S. Miwa, Y. Sakakibara, T. Nomoto, J. Konishi, K. Nishimura, and M. Komeda, " Quantitative fluorine 18 deoxyglucose uptake by myocardial positron emission tomography in rats.," J. Nucl. Cardiol. 1071-3581 9, 616-621 (2002). 10.1067/mnc.2002.127716 (Pubitemid 36050208)
28. C. H. Chen, R. F. Muzic, Jr., A. D. Nelson, and L. P. Adler, " Simultaneous recovery of size and radioactivity concentration of small spheroids with PET data.," J. Nucl. Med. 0161-5505 40, 118-130 (1999).
29. O. G. Rousset, Y. Ma, and A. C. Evans, " Correction for partial volume effects in PET: Principle and validation.," J. Nucl. Med. 0161-5505 39, 904-911 (1998). (Pubitemid 28216748)
30. O. G. Rousset and H. Zaidi, Quantitative Analysis in Nuclear Medicine Imaging (Springer, New York, 2005), Vol. 1, pp. 236-271.
31. O. G. Rousset, D. L. Collins, A. Rahmim, and D. F. Wong, " Design and implementation of an automated partial volume correction in PET: Application to dopamine receptor quantification in the normal human striatum.," J. Nucl. Med. 0161-5505 49, 1097-1106 (2008). 10.2967/jnumed.107.048330 (Pubitemid 351948018)
32. V. Frouin, C. Comtat, A. Reilhac, and M. C. Gregoire, " Correction of partial-volume effect for PET striatal imaging: Fast implementation and study of robustness.," J. Nucl. Med. 0161-5505 43, 1715-1726 (2002). (Pubitemid 35424999)
33. H. Zaidi, T. Ruest, F. Schoenahl, and M. L. Montandon, " Comparative assessment of statistical brain MR image segmentation algorithms and their impact on partial volume correction in PET.," Neuroimage 1053-8119 32, 1591-1607 (2006). 10.1016/j.neuroimage.2006.05.031 (Pubitemid 44332287)
34. Y. H. Fang and R. F. Muzic, Jr., " Spillover and partial-volume correction for image-derived input functions for small-animal 18F-FDG PET studies.," J. Nucl. Med. 0161-5505 49, 606-614 (2008). 10.2967/jnumed.107. 047613 (Pubitemid 351520609)
35. P. Zanotti-Fregonara, R. Maroy, C. Comtat, S. Jan, V. Gaura, A. Bar-Hen, M. J. Ribeiro, and R. Trebossen, " Comparison of 3 methods of automated internal carotid segmentation in human brain PET studies: Application to the estimation of arterial input function.," J. Nucl. Med. 0161-5505 50, 461-467 (2009). 10.2967/jnumed.108.059642
36. R. Maroy, M. J. Ribeiro, P. Delonlay, F. Brunelle, C. Nihoul-Feteke, and R. Trebossen, presented at the Proceedings of the Annual Congress of the European Association of Nuclear Medicine, Munich, Germany, 2008 (unpublished).
37. S. Scigliano, R. Maroy, Y. Fontyn, P. Merlet, C. Comtat, and R. Trebossen, presented at the 2009 Proceedings of the Annual Meeting of the Society of Nuclear Medicine, Toronto, Canada, 2009 (unpublished).
38. C. Comtat, K. P. E. M. Defrise, C. Michel, C. Lartizien, and D. Townsend, presented at the 1999 Proceedings of the IEEE MIC, Seattle, WA, 1999 (unpublished).
39. W. P. Segars, B. M. Tsui, E. C. Frey, G. A. Johnson, and S. S. Berr, " Development of a 4-D digital mouse phantom for molecular imaging research.," Mol. Imaging Biol. 1536-1632 6, 149-159 (2004). 10.1016/j.mibio.2004.03.002 (Pubitemid 38771978)