Relevance of proteomics standards for the ProteoRed Spanish organization

Journal of Proteomics

Volumn 73, Issue 6, 2010, Pages 1061-1066

  Martinez Bartolome, Salvador ^a   Blanco, Francisco ^b   Albar, Juan Pablo ^a  

^a CENTRO NACIONAL DE BIOTECNOLOGÍA   (Spain)

^b National Statistics Institutes   (Spain)

Author keywords

Clinical proteomics; MIAPE; Multi centric experiments; Multi centric platform; Proteomics standards; ProteoRed

Indexed keywords

BIOINFORMATICS; CLINICAL RESEARCH; INFORMATION PROCESSING; INFORMATION SERVICE; PRACTICE GUIDELINE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN STRUCTURE; PROTEOMICS; REVIEW; BIOLOGY; HUMAN; INTERDISCIPLINARY COMMUNICATION; INTERNET; METHODOLOGY; MULTICENTER STUDY (TOPIC); ORGANIZATION; PROCEDURES; SPAIN;

PROTEOME;

COMPUTATIONAL BIOLOGY; CONGRESSES AS TOPIC; HUMANS; INTERDISCIPLINARY COMMUNICATION; INTERNET; MULTICENTER STUDIES AS TOPIC; PROTEOME; PROTEOMICS; RESEARCH DESIGN; SPAIN;

EID: 77950491712     PISSN: 18743919     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jprot.2010.01.006     Document Type: Review

References (11)

1. Paradela A., Escuredo P.R., and Albar J.P. Geographical focus. Proteomics initiatives in Spain: ProteoRed. Proteomics 6 (2006) 73-76
2. Taylor C.F., Paton N.W., Lilley K.S., Binz P.A., et al. The minimum information about a proteomics experiment (MIAPE). Nat Biotechnol 25 (2007) 887-893
3. Taylor C.F., Hermjakob H., Julian Jr. R.K., Garavelli J.S., et al. The work of the Human Proteome Organisation's Proteomics Standards Initiative (HUPO PSI). Omics 10 (2006) 145-151
4. Martinez-Bartolome S., Medina-Aunon A., Jones A.R., and Albar J.P. Semi-automatic tool to describe, store and compare proteomics experiments based on MIAPE compliant reports. Proteomics 10 (2010) 1256-1260
5. Gibson F., Anderson L., Babnigg G., Baker M., et al. Guidelines for reporting the use of gel electrophoresis in proteomics. Nat Biotechnol 26 (2008) 863-864
6. Taylor C.F., Binz P.A., Aebersold R., Affolter M., et al. Guidelines for reporting the use of mass spectrometry in proteomics. Nat Biotechnol 26 (2008) 860-861
7. Binz P.A., Barkovich R., Beavis R.C., Creasy D., et al. Guidelines for reporting the use of mass spectrometry informatics in proteomics. Nat Biotechnol 26 (2008) 862
8. Cote R.G., Jones P., Apweiler R., and Hermjakob H. The ontology lookup service, a lightweight cross-platform tool for controlled vocabulary queries. BMC Bioinformatics 7 (2006) 97
9. Vizcaino J.A., Cote R., Reisinger F., Foster J.M., et al. A guide to the proteomics identifications database proteomics data repository. Proteomics 9 (2009) 4276-4283
10. Turck C.W., Falick A.M., Kowalak J.A., Lane W.S., et al. The Association of Biomolecular Resource Facilities Proteomics Research Group 2006 study: relative protein quantitation. Mol Cell Proteomics 6 (2007) 1291-1298
11. Bech-Serra J.J., Borthwick A., and Colome N. ProteoRed Consortium, et al. A multi-laboratory study assessing reproducibility of a 2D-DIGE differential proteomic experiment. J Biomol Tech 20 5 (2009 Dec) 293-296