메뉴 건너뛰기




Volumn 50, Issue 5, 2010, Pages 515-521

A method for release and multiple strand amplification of small quantities of DNA from endospores of the fastidious bacterium Pasteuria penetrans: ORIGINAL ARTICLE

Author keywords

16S rRNA gene; Bead beating; Endospores; GyrB; Multiple strand amplification; Pasteuria penetrans; Phi29

Indexed keywords

CLONING; DNA; GENES; MOLECULAR BIOLOGY; RNA;

EID: 77950478335     PISSN: 02668254     EISSN: 1472765X     Source Type: Journal    
DOI: 10.1111/j.1472-765X.2010.02830.x     Document Type: Article
Times cited : (12)

References (30)
  • 2
    • 0034101037 scopus 로고    scopus 로고
    • Phylogenetic position of the North American isolate of Pasteuria that parasitizes the soybean cyst nematode, Heterodera glycines, as inferred from 16S rDNA sequence analysis
    • Atibalentja, N., Noel, G.R. Domier, L.L. (2000) Phylogenetic position of the North American isolate of Pasteuria that parasitizes the soybean cyst nematode, Heterodera glycines, as inferred from 16S rDNA sequence analysis. Int J Syst Evol Microbiol 50, 605 613. (Pubitemid 30167504)
    • (2000) International Journal of Systematic and Evolutionary Microbiology , vol.50 , Issue.2 , pp. 605-613
    • Atibalentja, N.1    Noel, G.R.2    Domier, L.L.3
  • 3
    • 34547850237 scopus 로고    scopus 로고
    • Morphological and molecular characteristics of a new species of Pasteuria parasitic on Meloidogyne ardenensis
    • DOI 10.1016/j.jip.2007.02.008, PII S0022201107000468
    • Bishop, A.H., Gowen, S.R., Pembroke, B. Trotter, J.R. (2007) Morphological and molecular characteristics of a new species of Pasteuria parasitic on Meloidogyne ardenensis. J Invertebr Pathol 96, 28 33. (Pubitemid 47247447)
    • (2007) Journal of Invertebrate Pathology , vol.96 , Issue.1 , pp. 28-33
    • Bishop, A.H.1    Gowen, S.R.2    Pembroke, B.3    Trotter, J.R.4
  • 4
    • 33744538992 scopus 로고    scopus 로고
    • Phi29-based amplification of small genomes
    • DOI 10.1016/j.ab.2006.04.017, PII S000326970600282X
    • Brukner, I., Labuda, D. Krajinovic, M. (2006) Phi29-based amplification of small genomes. Anal Biochem 354, 154 156. (Pubitemid 43816398)
    • (2006) Analytical Biochemistry , vol.354 , Issue.1 , pp. 154-156
    • Brukner, I.1    Labuda, D.2    Krajinovic, M.3
  • 5
    • 23644445501 scopus 로고    scopus 로고
    • Phylogenetic analysis of Pasteuria penetrans by use of multiple genetic loci
    • DOI 10.1128/JB.187.16.5700-5708.2005
    • Charles, L., Ignazio, C., Davies, K.G., Bird, D., Burke, M., Kerry, B.R. Opperman, C.H. (2005) Phylogenetic analysis of Pasteuria penetrans by use of multiple genetic loci. J Bacteriol 187, 5700 5708. (Pubitemid 41134306)
    • (2005) Journal of Bacteriology , vol.187 , Issue.16 , pp. 5700-5708
    • Charles, L.1    Carbone, I.2    Davies, K.G.3    Bird, D.4    Burke, M.5    Kerry, B.R.6    Opperman, C.H.7
  • 6
    • 61849132214 scopus 로고    scopus 로고
    • Understanding the interaction between and obligate hyperparasitic bacterium, Pasteuria penetrans and its obligate plant-parasitic nematode host
    • Davies, K.G. (2009) Understanding the interaction between and obligate hyperparasitic bacterium, Pasteuria penetrans and its obligate plant-parasitic nematode host. Adv Parasitol 68, 211 245.
    • (2009) Adv Parasitol , vol.68 , pp. 211-245
    • Davies, K.G.1
  • 7
    • 0030856665 scopus 로고    scopus 로고
    • Diversity and partial characterization of putative virulence determinants in Pasteuria penetrans, the hyperparasitic bacterium of root- knot nematodes (Meloidogyne spp.)
    • Davies, K.G. Redden, M. (1997) Diversity and partial characterization of putative virulence determinants in Pasteuria penetrans, the hyperparasitic bacterium of root-knot nematodes (Meloidogyne spp.). J Appl Microbiol 83, 227 235. (Pubitemid 27329768)
    • (1997) Journal of Applied Microbiology , vol.83 , Issue.2 , pp. 227-235
    • Davies, K.G.1    Redden, M.2
  • 9
    • 0037217257 scopus 로고    scopus 로고
    • Detection and characterization of Pasteuria 16S rRNA gene sequences from nematodes and soils
    • Duan, Y.P., Castro, H.F., Hewlett, T.E., White, J.H. Ogram, A.V. (2003) Detection and characterization of Pasteuria 16S rRNA gene sequences from nematodes and soils. Int J Syst Evol Microbiol 53, 105 112.
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 105-112
    • Duan, Y.P.1    Castro, H.F.2    Hewlett, T.E.3    White, J.H.4    Ogram, A.V.5
  • 10
    • 0030437213 scopus 로고    scopus 로고
    • Development, life cycle, ultrastructure and phylogenetic position of Pasteuria ramosa Metchnikoff 1888: Rediscovery of an obligate endoparasite of Daphnia magna Straus
    • Ebert, D., Rainey, P., Embley, T.M. Scholz, D. (1996) Development, life cycle, ultrastructure and phylogenetic position of Pasteuria ramosa Metchnikoff 1888: rediscovery of an obligate endoparasite of Daphnia magna Straus. Philos Trans R Soc Lond B Biol Sci 351, 1689 1701. (Pubitemid 27098772)
    • (1996) Philosophical Transactions of the Royal Society B: Biological Sciences , vol.351 , Issue.1348 , pp. 1689-1701
    • Ebert, D.1
  • 11
    • 0030609611 scopus 로고    scopus 로고
    • Effects of long term storage and above normal temperatures on spore adhesion of Pasteuria penetrans and infection of the root-knot nematode Meloidogyne javanica
    • Giannakou, I.O., Pembroke, B., Gowen, S.R. Davies, K.G. (1997) Effects of long term storage and above normal temperatures on spore adhesion of Pasteuria penetrans and infection of root-knot nematode Meloidogyne javanica. Nematologica 43, 185 192. (Pubitemid 27218653)
    • (1997) Nematologica , vol.43 , Issue.2 , pp. 185-192
    • Giannakou, I.O.1    Pembroke, B.2    Gowen, S.R.3    Davies, K.G.4
  • 13
    • 77950506513 scopus 로고    scopus 로고
    • Biological control of Meloidogyne incognita using in vitro produced Pasteuria penetrans in a microplot study
    • Hewlett, T.E., Griswold, S.T. Smith, K.S. (2006) Biological control of Meloidogyne incognita using in vitro produced Pasteuria penetrans in a microplot study. J Nematol 38, 274.
    • (2006) J Nematol , vol.38 , pp. 274
    • Hewlett, T.E.1    Griswold, S.T.2    Smith, K.S.3
  • 15
    • 0033986599 scopus 로고    scopus 로고
    • Differentiation of phylogenetically related slowly growing mycobacteria by their gyrB sequences
    • Kasai, H., Ezaki, T. Harayama, S. (2000) Differentiation of phylogenetically related slowly growing mycobacteria by their gyrB sequences. J Clin Microbiol 38, 301 308. (Pubitemid 30043306)
    • (2000) Journal of Clinical Microbiology , vol.38 , Issue.1 , pp. 301-308
    • Kasai, H.1    Ezaki, T.2    Harayama, S.3
  • 16
    • 0001297934 scopus 로고
    • Pasteuria ramosa un representant des bacteries a division longitudinale
    • Metchnikoff, M.E. (1888) Pasteuria ramosa un representant des bacteries a division longitudinale. Ann Inst Pasteur 2, 165 170.
    • (1888) Ann Inst Pasteur , vol.2 , pp. 165-170
    • Metchnikoff, M.E.1
  • 18
    • 34447502046 scopus 로고    scopus 로고
    • Multiple-strand displacement and identification of single nucleotide polymorphisms as markers of genotypic variation of Pasteuria penetrans biotypes infecting root-knot nematodes
    • DOI 10.1111/j.1574-6941.2007.00340.x
    • Nong, G., Chow, V., Schmidt, L.M., Dickson, D.W. Preston, J.F. (2007) Multiple-strand displacement and identification of single nucleotide polymorphisms as markers of genotypic variation of Pasteuria penetrans biotypes infecting root-knot nematodes. FEMS Microbiol Ecol 61, 327 336. (Pubitemid 47083938)
    • (2007) FEMS Microbiology Ecology , vol.61 , Issue.2 , pp. 327-336
    • Nong, G.1    Chow, V.2    Schmidt, L.M.3    Dickson, D.W.4    Preston, J.F.5
  • 19
    • 0002767865 scopus 로고
    • Root-knot nematodes: A global menace to crop production
    • Sasser, J.N. (1980) Root-knot nematodes: a global menace to crop production. Plant Dis 64, 36 41.
    • (1980) Plant Dis , vol.64 , pp. 36-41
    • Sasser, J.N.1
  • 20
    • 0001071721 scopus 로고
    • Pasteuria penetrans (ex Thorne,1940) nom. rev., comb. n., sp. n., a mycelial and endospore-forming bacterium parasitic in plant-parasitic nematodes
    • Sayre, R.M. Starr, M.P. (1985) Pasteuria penetrans (ex Thorne,1940) nom. rev., comb. n., sp. n., a mycelial and endospore-forming bacterium parasitic in plant-parasitic nematodes. Proc Helminthol Soc Wash 52, 149 165.
    • (1985) Proc Helminthol Soc Wash , vol.52 , pp. 149-165
    • Sayre, R.M.1    Starr, M.P.2
  • 21
    • 0002756639 scopus 로고
    • Comparison of Pasteuria penetrans from Meloidogyne incognita with a related mycelial and endospore forming bacterial parasite from Pratylenhus brachyurus
    • Sayre, R.M., Starr, M.P., Golden, A.M., Wergin, W.P. Endo, B.Y. (1988) Comparison of Pasteuria penetrans from Meloidogyne incognita with a related mycelial and endospore forming bacterial parasite from Pratylenhus brachyurus. P helm Soc Wash 55, 28 49.
    • (1988) P Helm Soc Wash , vol.55 , pp. 28-49
    • Sayre, R.M.1    Starr, M.P.2    Golden, A.M.3    Wergin, W.P.4    Endo, B.Y.5
  • 22
    • 0025779116 scopus 로고
    • Pasteuria nishizawae sp. nov., a mycelial and endospore-forming bacterium parasitic on cyst nematodes of genera Heterodera and Globodera
    • Sayre, R.M., Wergin, W.P., Schmidt, J.M. Starr, M.P. (1991) Pasteuria nishizawae sp. nov., a mycelial and endospore-forming bacterium parasitic on cyst nematodes of genera Heterodera and Globodera. Res Microbiol 142, 551 564.
    • (1991) Res Microbiol , vol.142 , pp. 551-564
    • Sayre, R.M.1    Wergin, W.P.2    Schmidt, J.M.3    Starr, M.P.4
  • 23
    • 2442475987 scopus 로고    scopus 로고
    • Detection of Pasteuria penetrans infection in Meloidogyne arenaria race 1 in planta by polymerase chain reaction
    • DOI 10.1016/j.femsec.2004.03.011, PII S016864960400090X
    • Schmidt, L.M., Preston, J.F., Nong, G., Dickson, D.W. Aldrich, H.C. (2004) Detection of Pasteuria penetrans infection in Meloidogyne arenaria race 1 in planta by polymerase chain reaction. FEMS Microbiol Ecol 48, 457 464. (Pubitemid 38648932)
    • (2004) FEMS Microbiology Ecology , vol.48 , Issue.3 , pp. 457-464
    • Schmidt, L.M.1    Preston, J.F.2    Nong, G.3    Dickson, D.W.4    Aldrich, H.C.5
  • 24
    • 0023849516 scopus 로고
    • Pasteuria thornei sp. nov. and Pasteuria penetrans sensu stricto emend., mycelial and endospore forming bacteria parasitic, respectively, on plant-parasitic nematodes of the genera Pratylenchus and Meloidogyne
    • Starr, M.P. Sayre, R.M. (1988) Pasteuria thornei sp. nov. and Pasteuria penetrans sensu stricto emend., mycelial and endospore forming bacteria parasitic, respectively, on plant-parasitic nematodes of the genera Pratylenchus and Meloidogyne. Ann Inst Pasteur Microbiol 139, 11 31.
    • (1988) Ann Inst Pasteur Microbiol , vol.139 , pp. 11-31
    • Starr, M.P.1    Sayre, R.M.2
  • 25
    • 84861102979 scopus 로고
    • Mass production of Bacillus penetrans for the biological control of root knot nematodes
    • Stirling, G.R. Wachtel, M.F. (1980) Mass production of Bacillus penetrans for the biological control of root knot nematodes. Nematologica 26, 308 312.
    • (1980) Nematologica , vol.26 , pp. 308-312
    • Stirling, G.R.1    Wachtel, M.F.2
  • 26
    • 0642333688 scopus 로고    scopus 로고
    • Phylogenetic analysis and confirmation of the endospore-forming nature of Pasteuria penetrans based on the spo0A gene
    • Trotter, J.R. Bishop, A.H. (2003) Phylogenetic analysis and confirmation of the endospore-forming nature of Pasteuria penetrans based on the spo0A gene. FEMS Microbiol Lett 225, 249 256.
    • (2003) FEMS Microbiol Lett , vol.225 , pp. 249-256
    • Trotter, J.R.1    Bishop, A.H.2
  • 27
    • 0032055049 scopus 로고    scopus 로고
    • Population dynamics of phenol-degrading bacteria in activated sludge determined by gyrB-targeted quantitative PCR
    • Watanabe, K., Yamamoto, S., Hino, S. Harayama, S. (1998) Population dynamics of phenol-degrading bacteria in activated sludge determined by gyrB-targeted quantitative PCR. Appl Environ Microbiol 64, 1203 1209. (Pubitemid 28188372)
    • (1998) Applied and Environmental Microbiology , vol.64 , Issue.4 , pp. 1203-1209
    • Watanabe, K.1    Yamamoto, S.2    Hino, S.3    Harayama, S.4
  • 28
    • 0033014982 scopus 로고    scopus 로고
    • An outbreak of nonflocculating catabolic populations caused the breakdown of a phenol-digesting activated-sludge process
    • Watanabe, K., Teramoto, M. Harayama, S. (1999) An outbreak of nonflocculating catabolic populations caused by the breakdown of a phenol-digesting activated-sludge process. Appl Environ Microbiol 65, 2813 2819. (Pubitemid 29315546)
    • (1999) Applied and Environmental Microbiology , vol.65 , Issue.7 , pp. 2813-2819
    • Watanabe, K.1    Teramoto, M.2    Harayama, S.3
  • 29
  • 30
    • 0028948030 scopus 로고
    • PCR amplification and direct sequencing of gyrB genes with universal primers and their application to the detection and taxonomic analysis of Pseudomonas putida strains
    • Yamamoto, S. Harayama, S. (1995) PCR amplification and direct sequencing of gyrB genes with universal primers and their application to the detection and taxonomic analysis of Pseudomonas putida strains. Appl Environ Microbiol 61, 1104 1109.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 1104-1109
    • Yamamoto, S.1    Harayama, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.