Controlled and efficient hybridization achieved with DNA probes immobilized solely through preferential DNA-substrate interactions

Analytical Chemistry

Volumn 82, Issue 7, 2010, Pages 2803-2810

  Sohreiner, Sarah M ^a   Shudy, David F ^a   Hatoh, Anna L ^a   Opdahl, Aric ^a   Whitman, Lloyd J ^b,d   Petrovykh, Dmitri Y ^b,c  

^a UNIVERSITY OF WISCONSIN LA CROSSE   (United States)

^b NAVAL RESEARCH LABORATORY   (United States)

^c Bldg 142   (United States)

^d NATIONAL INSTITUTE OF STANDARDS AND TECHNOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE NUCLEOTIDE; DNA PROBE; DNA SENSORS; MODEL SYSTEM; PREFERENTIAL ADSORPTION; QUANTITATIVE ANALYSIS; RELATIVE CONCENTRATION; SINGLE-STRANDED DNA; SUBSTRATE INTERACTION; SURFACE DENSITY; SURFACE-BASED;

ADSORPTION; DNA; GENES; NUCLEOTIDES;

PROBES;

ADENINE; GOLD; SINGLE STRANDED DNA;

ARTICLE; CHEMISTRY; DNA PROBE; METHODOLOGY; NUCLEIC ACID HYBRIDIZATION; X RAY PHOTOELECTRON SPECTROSCOPY;

ADENINE; DNA PROBES; DNA, SINGLE-STRANDED; GOLD; NUCLEIC ACID HYBRIDIZATION; PHOTOELECTRON SPECTROSCOPY;

EID: 77950412604     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac902765g     Document Type: Article

References (34)

1. Levicky, R.; Horgan, A. Trends Biotechnol. 2005, 23, 143-149.
2. Draghici, S.; Khatri, P.; Eklund, A. C.; Szallasi, Z. Trends Genet. 2006, 22, 101-109.
3. Love, J. C.; Estroff, L. A.; Kriebel, J. K.; Nuzzo, R G.; Whitesides, G. M. Chem Rev. (Washington, DC) 2005, 105, 1103-1169.
4. Wolf, L. K.; Gao, Y.; Georgiadis, R M. Langmuir 2004, 20, 3357-3361.
5. Levicky, R.; Herne, T. M.; Tarlov, M. J.; Satya, S. K. J. Am. Chem. Soc. 1998, 120, 9787-9792.
6. Lee, C. Y.; Gong, P.; Harbers, G. M.; Grainger, D. W.; Castner, D. G.; Gamble, L. J. Anal. Chem. 2006, 78, 3316-3325.
7. Gong, P.; Lee, C. Y.; Gamble, L. J.; Castner, D. G.; Grainger, D. W. Anal. Chem. 2006, 78, 3326-3334.
8. Herne, T. M.; Tarlov, M. J. J. Am. Chem. Soc. 1997, 119, 8916-8920.
9. Steel, A. B.; Heme, T. M.; Tarlov, M. J. Anal Chem. 1998, 70, 4670-4677.
10. Peterson, A. W.; Heaton, R J.; Georgiadis, R. M. Nucleic Acids Res. 2001, 29, 5163-5168.
11. Vainrub, A.; Pettitt, B. M. Phys. Rev. E 2002, 66, 041905.
12. Vainrub, A.; Pettitt, B. M. J. Am. Chem. Soc. 2003, 125, 7798-7799.
13. Demers, L M.; Mirkin, C. A.; Mucic, R C.; Reynolds, R A.; Letsinger, R L.; Elghanian, R; Viswanadham, G. Anal Chem. 2000, 72, 5535-5541.
14. Nelson, B. P.; Grimsrud, T. E.; Liles, M. R.; Goodman, R M.; Corn, R M. Anal. Chem. 2001, 73, 1-7.
15. De Paul, S. M.; Falconnet, D.; Pasche, S.; Textor, M.; Abel, A. P.; Kauffmann, E.; Liedtke, R; Ehrat, M. Anal. Chem. 2005, 77, 5831-5838.
16. Su, X. D.; Wu, Y. J.; Robelek, R; Knoll, W. Langmuir 2005, 21, 348-353.
17. Lee, C. Y.; Nguyen, P. C. T.; Grainger, D.W.; Gamble, L J.; Castner, D. G. Anal. Chem. 2007, 79, 4390-4400.
18. Petrovykh, D. Y.; Kimura-Suda, H.; Whitman, L. J.; Tarlov, M. J. J. Am. Chem. Soc. 2003, 125, 5219-5226.
19. Opdahl, A.; Petrovykh, D. Y.; Kimura-Suda, H.; Tarlov, M. J.; Whitman, L. J. Proc Natl Acad Sci. U.S.A. 2007, 104, 9-14.
20. Kimura-Suda, H.; Petrovykh, D. Y.; Tarlov, M. J.; Whitman, L. J. J. Am. Chem. Soc. 2003, 125, 9014-9015.
21. Zhou, C. Z.; Walker, A. V. Langmuir 2006, 22, 11420-11425.
22. Tamanaha, C. R.; Malito, M. P.; Mulvaney, S. P.; Whitman, L J. Lab Chip 2009, 9, 1468-1471.
23. Jung, L. S.; Campbell, C. T.; Chinowsky, T. M.; Mar, M. N.; Yee, S. S. Lanemuir 1998, 14, 5636-5648.
24. Shumaker-Parry, J. S.; Campbell, C. T. Anal. Chem. 2004, 76, 907-917.
25. Petrovykh, D. Y.; Kimura-Suda, H.; Tarlov, M. J.; Whitman, L. J. Lanemuir 2004, 20, 429-440.
26. Petrovykh, D. Y.; Pérez-Dieste, V.; Opdahl, A.; Kimura-Suda, H.; Sullivan, J. M.: Tarlov. M. T.: Himpsel. F. J.: Whitman. L. J. J. Am. Chem. Soc. 2006, 128, 2-3.
27. Anne, A.; Bouchardon, A.; Moiroux. T. J. Am. Chem. Soc. 2003, 125, 1112-1113.
28. Demers, L. M.; Östblom, M.; Zhang, H.; Jang, N.-H.; Liedberg, B.; Mirkin, C. A. J. Am. Chem. Soc. 2002, 124, 11248-11249.
29. Östblom, M.; Liedberg, B.; Demers, L. M.; Mirkin, C. A. T. Phys. Chem. B 2005, 109, 15150-15160.
30. Storhoff, J.J.; Elghanian, R.; Mirkin, C. A.: Letsinger. R. L. Langmuir 2001 18, 6666-6670.
31. Wirte, R; Walti, C.; Tosch, P.; Pepper, M.; Davies, A. G.; Germishuizen, W. A.; Middelberg, A. P. Langmuir 2004, 20, 1527-1530.
32. Peeters, S.; Stakenborg, T.; Reekmans, G.; Laureyn, W.; Lagae, L.; Van Aerschot, A.; Van Ranst, M. Biosens. Bioelectron. 2008, 24, 72-77.
33. Zu, Y. B.; Gao, Z. Q. Anal. Chem. 2009, 81, 8523-8528.
34. Hurst, S. J.; Lytton-Jean, A. K. R.; Mirkin, C. A. Anal. Chem. 2006, 78, 8313-8318.