메뉴 건너뛰기




Volumn 58, Issue 1, 2010, Pages 1-14

An S-curve-based approach of identifying biological sequences

Author keywords

DNA; Pattern identifying; Protein; S curve diagram

Indexed keywords

AMINO ACID; BIOLOGY; DIAGRAM; DNA; EXPERIMENTAL STUDY; PROTEIN; VISUALIZATION;

EID: 77950366325     PISSN: 00015342     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10441-009-9081-1     Document Type: Article
Times cited : (4)

References (19)
  • 1
    • 19744374010 scopus 로고    scopus 로고
    • Analysis of similarity between RNA secondary structures
    • Bai F, Zhu W, Wang T (2005) Analysis of similarity between RNA secondary structures. Chem Phys Lett 408: 258-263.
    • (2005) Chem Phys Lett , vol.408 , pp. 258-263
    • Bai, F.1    Zhu, W.2    Wang, T.3
  • 2
    • 34447633537 scopus 로고    scopus 로고
    • Distribution moments of 2D-graphs as descriptors of DNA sequences
    • doi:10.1016/j.cplett.2007.06.088
    • Bielińska-Waż D, Nowak W, Waż P, Nandy A, Clark T (2007a) Distribution moments of 2D-graphs as descriptors of DNA sequences. Chem Phys Lett 443: 408-413. doi: 10. 1016/j. cplett. 2007. 06. 088.
    • (2007) Chem Phys Lett , vol.443 , pp. 408-413
    • Bielińska-Waz, D.1    Nowak, W.2    Waz, P.3    Nandy, A.4    Clark, T.5
  • 3
    • 34250648110 scopus 로고    scopus 로고
    • 2D-dynamic representation of DNA sequence
    • doi:10.1016/j.cplett.2007.05.050
    • Bielińska-Waż D, Clark T, Waż P, Nowak W, Nandy A (2007b) 2D-dynamic representation of DNA sequence. Chem Phys Lett 442: 140-144. doi: 10. 1016/j. cplett. 2007. 05. 050.
    • (2007) Chem Phys Lett , vol.442 , pp. 140-144
    • Bielińska-Waz, D.1    Clark, T.2    Waz, P.3    Nowak, W.4    Nandy, A.5
  • 4
    • 34548010263 scopus 로고    scopus 로고
    • Similarity studies of DNA sequences using genetic methods
    • doi:10.1016/j.cplett.2007.07.044
    • Bielińska-Waż D, Waż P, Clark T (2007c) Similarity studies of DNA sequences using genetic methods. Chem Phys Lett 445: 68-73. doi: 10. 1016/j. cplett. 2007. 07. 044.
    • (2007) Chem Phys Lett , vol.445 , pp. 68-73
    • Bielińska-Waz, D.1    Waz, P.2    Clark, T.3
  • 5
    • 17844404533 scopus 로고    scopus 로고
    • Novel 4D numerical representation of DNA sequences
    • Chi R, Ding K (2005) Novel 4D numerical representation of DNA sequences. Chem Phys Lett 407: 63-67.
    • (2005) Chem Phys Lett , vol.407 , pp. 63-67
    • Chi, R.1    Ding, K.2
  • 6
    • 0022592245 scopus 로고
    • A simple way to look at DNA
    • Gates MA (1986) A simple way to look at DNA. J Theor Biol 119: 319-328.
    • (1986) J Theor Biol , vol.119 , pp. 319-328
    • Gates, M.A.1
  • 7
    • 0037450561 scopus 로고    scopus 로고
    • Numerical characterization of DNA sequences in a 2-D graphical representation scheme of low degeneracy
    • Guo X, Nandy A (2003) Numerical characterization of DNA sequences in a 2-D graphical representation scheme of low degeneracy. Chem Phys Lett 369: 361-366.
    • (2003) Chem Phys Lett , vol.369 , pp. 361-366
    • Guo, X.1    Nandy, A.2
  • 8
    • 0000678497 scopus 로고    scopus 로고
    • A novel 2-D graphical representation of DNA sequences of low degeneracy
    • Guo X, Randic M, Basak SC (2001) A novel 2-D graphical representation of DNA sequences of low degeneracy. Chem Phys Lett 350: 106-112.
    • (2001) Chem Phys Lett , vol.350 , pp. 106-112
    • Guo, X.1    Randic, M.2    Basak, S.C.3
  • 9
    • 0020659327 scopus 로고
    • H curves a novel method of representation of nucleotide series especially suited for long DNA sequence
    • Hamori E, Ruskin J (1983) H curves a novel method of representation of nucleotide series especially suited for long DNA sequence. J Biol Chem 258: 1318-1327.
    • (1983) J Biol Chem , vol.258 , pp. 1318-1327
    • Hamori, E.1    Ruskin, J.2
  • 10
    • 13844306521 scopus 로고    scopus 로고
    • New invariant of DNA sequences
    • doi:10.1021/ci049874l
    • Li C, Wang J (2005) New invariant of DNA sequences. J Chem Inf Model 45(1): 115-120. doi:10.1021/ci049874l.
    • (2005) J Chem Inf Model , vol.45 , Issue.1 , pp. 115-120
    • Li, C.1    Wang, J.2
  • 11
    • 0036557842 scopus 로고    scopus 로고
    • Some notes on 2-D graphical representation of DNA sequence
    • Liu Y, Guo X, Pan L, Xu J, Wang S (2002) Some notes on 2-D graphical representation of DNA sequence. J Chem Inf Comput Sci 42: 529-533.
    • (2002) J Chem Inf Comput Sci , vol.42 , pp. 529-533
    • Liu, Y.1    Guo, X.2    Pan, L.3    Xu, J.4    Wang, S.5
  • 12
    • 33749511934 scopus 로고    scopus 로고
    • Investigations on evolutionary changes in base distributions in gene sequences
    • Nandy A (2002) Investigations on evolutionary changes in base distributions in gene sequences. Internet Electron J Mol Des 1: 545-558.
    • (2002) Internet Electron J Mol Des , vol.1 , pp. 545-558
    • Nandy, A.1
  • 13
    • 33749518282 scopus 로고    scopus 로고
    • Mathematical descriptors of DNA sequences: Development and applications
    • Nandy A, Harle M, Basak SC (2006) Mathematical descriptors of DNA sequences: development and applications. Arkivoc ix: 211-238.
    • (2006) Arkivoc , vol.ix , pp. 211-238
    • Nandy, A.1    Harle, M.2    Basak, S.C.3
  • 14
    • 0033628753 scopus 로고    scopus 로고
    • Condensed representation of DNA primary sequences
    • Randic MJ (2000) Condensed representation of DNA primary sequences. Chem Inf Comput Sci 40: 50-56.
    • (2000) Chem Inf Comput Sci , vol.40 , pp. 50-56
    • Randic, M.J.1
  • 15
    • 0037435485 scopus 로고    scopus 로고
    • Novel 2-D graphical representation of DNA sequences and their numerical characterization
    • Randic M, Vracko M, Lers N, Plavsic D (2003a) Novel 2-D graphical representation of DNA sequences and their numerical characterization. Chem Phys Lett 368: 1-6.
    • (2003) Chem Phys Lett , vol.368 , pp. 1-6
    • Randic, M.1    Vracko, M.2    Lers, N.3    Plavsic, D.4
  • 16
    • 0037470662 scopus 로고    scopus 로고
    • Analysis of similarity/dissimilarity of DNA sequences based on novel 2-D graphical representation
    • Randic M, Vracko M, Lers N, Plavsic D (2003b) Analysis of similarity/dissimilarity of DNA sequences based on novel 2-D graphical representation. Chem Phys Lett 371: 202-207.
    • (2003) Chem Phys Lett , vol.371 , pp. 202-207
    • Randic, M.1    Vracko, M.2    Lers, N.3    Plavsic, D.4
  • 17
    • 0033093936 scopus 로고    scopus 로고
    • Indexing scheme and similarity measures for macromolecular sequences
    • Raychaudhury C, Nandy A (1999) Indexing scheme and similarity measures for macromolecular sequences. J Chem Inf Comput Sci 39: 243-247.
    • (1999) J Chem Inf Comput Sci , vol.39 , pp. 243-247
    • Raychaudhury, C.1    Nandy, A.2
  • 18
    • 0037413312 scopus 로고    scopus 로고
    • DB-Curve: A novel 2D method of DNA sequence visualization and representation
    • Wu Y, Liew AW, Yan H, Yang M (2003) DB-Curve: a novel 2D method of DNA sequence visualization and representation. Chem Phys Lett 367: 170-176.
    • (2003) Chem Phys Lett , vol.367 , pp. 170-176
    • Wu, Y.1    Liew, A.W.2    Yan, H.3    Yang, M.4
  • 19
    • 22544455386 scopus 로고    scopus 로고
    • Analysis of similarity/dissimilarity of DNA sequences based on a 3-D graphical representation
    • Yao Y, Nan X, Wang T (2005) Analysis of similarity/dissimilarity of DNA sequences based on a 3-D graphical representation. Chem Phys Lett 411: 248-255.
    • (2005) Chem Phys Lett , vol.411 , pp. 248-255
    • Yao, Y.1    Nan, X.2    Wang, T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.