Investigating antimicrobial activity in Rheinheimera sp. due to hydrogen peroxide generated by l-lysine oxidase activity

Enzyme and Microbial Technology

Volumn 46, Issue 6, 2010, Pages 487-493

  Chen, Wen Ming ^a   Lin, Chang Yi ^a   Sheu, Shih Yi ^a  

^a NATIONAL KAOHSIUNG UNIVERSITY OF APPLIED SCIENCES   (Taiwan)

Author keywords

Antibiogram assay; Antimicrobial activity; Hydrogen peroxide; L Lysine oxidase; Phylogenetic analyses; Rheinheimera

Indexed keywords

16S RRNA GENE SEQUENCE; AMINO ACID FRAGMENTS; ANTI-MICROBIAL ACTIVITY; ANTI-MICROBIAL EFFECTS; ANTIBACTERIAL PROTEINS; BACTERIAL STRAINS; BROAD SPECTRUM; CULTURE MEDIA; ENZYMATIC ACTIVITIES; FRESHWATER BACTERIA; GRAM-NEGATIVE BACTERIA; ISO-ELECTRIC POINTS; L-LYSINE; LIQUID CHROMATOGRAPHY-TANDEM MASS SPECTROMETRY; MARINE BACTERIUM; MARINOMONAS; MONOMERIC PROTEINS; OXIDASE ACTIVITY; PHYLOGENETIC ANALYSES; PHYLOGENETIC ANALYSIS; PSEUDOALTEROMONAS;

BACTERIA; BACTERIOLOGY; HYDROGEN; HYDROGEN PEROXIDE; LIQUID CHROMATOGRAPHY; MACROMOLECULES; MASS SPECTROMETRY; ORGANIC ACIDS; OXIDATION; PROTEINS; RNA;

AMINO ACIDS;

CATALASE; HYDROGEN PEROXIDE; LYSINE OXIDASE; MARINOCINE; POLYPEPTIDE ANTIBIOTIC AGENT; PROTEIN ALPP; RNA 16S; UNCLASSIFIED DRUG;

AEROMONAS HYDROPHILA; ANTIBIOTIC SENSITIVITY; ANTIMICROBIAL ACTIVITY; ARTICLE; BACILLUS SUBTILIS; BACTERIUM; CANDIDA ALBICANS; CHROMATIACEAE; CONTROLLED STUDY; CYANOTHECE; ENTEROCOCCUS FAECALIS; ENTEROCOCCUS FAECIUM; ENZYME ACTIVITY; ESCHERICHIA COLI; FRESHWATER SPECIES; GENE SEQUENCE; ISOELECTRIC POINT; LACTOBACILLUS PLANTARUM; LACTOCOCCUS LACTIS; LIQUID CHROMATOGRAPHY; MARIMONAS MEDITERRANEA; METHICILLIN RESISTANT STAPHYLOCOCCUS AUREUS; MOLECULAR PHYLOGENY; MOLECULAR WEIGHT; NONHUMAN; NUCLEOTIDE SEQUENCE; PHOTOBACTERIUM DAMSELAE; PSEUDOALTEROMONAS FLAVIPULCHRA; PSEUDOALTEROMONAS PISCICIDA; PSEUDOALTEROMONAS TUNICATA; PSEUDOMONAS PUTIDA; RHEINHEIMERA; RHEINHEIMERA TEXASENSIS; SACCHAROMYCES CEREVISIAE; STAPHYLOCOCCUS AUREUS; STREPTOCOCCUS; TANDEM MASS SPECTROMETRY; VIBRIO ALGINOLYTICUS; VIBRIO FLUVIALIS; VIBRIO PROTEOLYTICUS;

ALGAE; BACTERIA (MICROORGANISMS); MARINOMONAS MEDITERRANEA; NEGIBACTERIA; POSIBACTERIA; PSEUDOALTEROMONAS TUNICATA; RHEINHEIMERA; TESTUDINES;

EID: 77950341454     PISSN: 01410229     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.enzmictec.2010.01.006     Document Type: Article

References (64)

1. Levy O. Antimicrobial proteins and peptides: anti-infective molecules of mammalian leukocytes. J Leukoc Biol 2004, 76:909-925.
2. Cascales E., Buchanan S.K., Duché D., Kleanthous C., Lloubès R., Postle K., et al. Colicin biology. Microbiol Mol Biol Rev 2007, 71:158-229.
3. Hancock R.E.W., Chapple D.S. Peptide antibiotics. Antimicrob Agents Chemother 1999, 43:1317-1323.
4. Baba T., Schneewind O. Instruments of microbial warfare: bacteriocin synthesis, toxicity and immunity. Trends Microbiol 1998, 6:66-71.
5. Kumar J.K. Lysostaphin: an antistaphylococcal agent. Appl Microbiol Biotechnol 2008, 80:555-561.
6. Lindgren S.E., Dobrogosz W.J. Antagonistic activities of lactic acid bacteria in food and feed fermentations. FEMS Microbiol Rev 1990, 87:149-163.
7. Pericone C.D., Overweg K., Hermans P.W., Weiser J.N. Inhibitory and bactericidal effects of hydrogen peroxide production by Streptococcus pneumoniae on other inhabitants of the upper respiratory tract. Infect Immun 2000, 68:3990-3997.
8. Kreth J., Merritt J., Shi W., Qi F. Competition and coexistence between Streptococcus mutans and Streptococcus sanguinis in the dental biofilm. J Bacteriol 2005, 187:7193-7203.
9. Wellner D., Meister A. Studies on the mechanism of action of l-amino acid oxidase. J Biol Chem 1961, 236:2357-2364.
10. Stiles B.G., Sexton F.W., Weinstein S.A. Antibacterial effects of different snake venoms: purification and characterization of antibacterial proteins from Pseudechis australis venom. Toxicon 1991, 29:1129-1141.
11. Du X.Y., Clemetson K.J. Snake venom l-amino acid oxidases. Toxicon 2002, 40:659-665.
12. Yang H., Johnson P.M., Ko K.C., Kamio M., Germann M.W., Derby C.D., et al. Cloning, characterization, and expression of escaping, a broadly antimicrobial FAD-containing l-amino acid oxidase from ink of the sea hare Aplysia californica. J Exp Biol 2005, 208:3609-3622.
13. Barsby T. Drug discovery and sea hares: bigger is better. Trends Biotechnol 2006, 24:1-3.
14. Ko K.C., Wang B., Tai P.C., Derby C.D. Identification of potent bactericidal compounds produced by escaping, an l-amino acid oxidase in the ink of the sea hare Aplysia californica. Antimicrob Agents Chemother 2008, 52:4455-4462.
15. Kusakabe H., Kodama K., Kuninaka A., Yoshino H., Misono H., Soda K. A new antitumor enzyme, l-lysine α-oxidase from Trichoderma viride. J Biol Chem 1980, 255:976-981.
16. Lukasheva E.V., Berezov T.T. l-Lysine α-oxidase: physicochemical and biological properties. Biochemistry 2002, 67:1394-1402.
17. McCarthy S.A., Johnson R.M., Kakimoto D. Characterization of an antibiotic produced by Alteromonas luteoviolacea Gauthier 1982, 85 isolated from Kinko Bay, Japan. J Appl Bacteriol 1994, 77:426-432.
18. Gomez D., Espinosa E., Bertazzo M., Lucas-Elio P., Solano F., Sanchez-Amat A. The macromolecule with antimicrobial activity synthesized by Pseudoalteromonas luteoviolacea strains is an l-amino acid oxidase. Appl Microbiol Biotechnol 2008, 79:925-930.
19. James S.G., Holmstrom C., Kjelleberg S. Purification and characterization of a novel antibacterial protein from marine bacterium D2. Appl Environ Microbiol 1996, 62:2783-2788.
20. Mai-Prochnow A., Evans F., Dalisay-Saludes D., Stelzer S., Egan S., James S., et al. Biofilm development and cell death in the marine bacterium Pseudoalteromonas tunicate. Appl Environ Microbiol 2004, 70:3232-3238.
21. Mai-Prochnow A., Weeb J.S., Ferrari B.C., Kjelleberg S. Ecological advantages of autolysis during the development and dispersal of Pseudoalteromonas tunicata biofilm. Appl Environ Microbiol 2006, 72:5414-5420.
22. Mai-Prochnow A., Lucas-Elio P., Egan S., Thomas T., Webb J.S., Sanchez-Amat A., et al. Hydrogen peroxide linked to lysine oxidase activity facilitates biofilm differentiation and dispersal in several Gram-negative bacteria. J Bacteriol 2008, 190:5493-5501.
23. Lucas-Elio P., Hernandez P., Sanchez-Amat A., Solano F. Purification and partial characterization of marinocine, a new broad-spectrum antibacterial protein produced by Marinomonas mediterranea. Biochim Biophys Acta 2005, 1721:193-203.
24. Lucas-Elio P., Gomez D., Solano F., Sanchez-Amat A. The antimicrobial activity of marinocine, synthesized by Marinomonas mediterranea, is due to hydrogen peroxide generated by its lysine oxidase activity. J Bacteriol 2006, 188:2493-2501.
25. Gomez D., Lucas-Elio P., Sanchez-Amat A., Solano F. A novel type of lysine oxidase: l-lysine-e{open}-oxidase. Biochim Biophys Acta 2006, 1764:1577-1585.
26. Brettar I., Christen R., Höfle M.G. Rheinheimera baltica gen. nov., sp. nov., a blue-coloured bacterium isolated from the central Baltic Sea. Int J Syst Evol Microbiol 2002, 52:1851-1857.
27. Romanenko L.A., Uchino M., Falsen E., Zhukove N.V., Mikhailov V.V., Uchimura T. Rheinheimera pacifica sp. nov., a novel halotolerant bacterium isolated from deep sea water of the Pacific. Int J Syst Evol Microbiol 2003, 53:1973-1977.
28. Brettar I., Christen R., Höfle M.G. Rheinheimera perlucida sp. nov., a marine bacterium of the Gammaproteobacteria isolated from surface water of the central Baltic Sea. Int J Syst Evol Microbiol 2006, 56:2177-2183.
29. Yoon J.H., Park S.E., Kang S.J., Oh T.K. Rheinheimera aquimaris sp. nov., isolated from seawater of the East Sea in Korea. Int J Syst Evol Microbiol 2007, 57:1386-1390.
30. Halpern M., Senderovich Y., Snir S. Rheinheimera chironomi sp. nov., isolated from a chironomid (Diptera; Chironomidae) egg mass. Int J Syst Evol Microbiol 2007, 57:1872-1875.
31. Merchant M.M., Welsh A.K., McLean R.J.C. Rheinheimera texasensis sp. nov., a halointolerant freshwater oligotroph. Int J Syst Evol Microbiol 2007, 57:2376-2380.
32. Ryu S.H., Chung B.S., Park M., Lee S.S., Lee S.S., Jeon C.C. Rheinheimera soli sp. nov., a gammaproteobacterium isolated from soil in Korea. Int J Syst Evol Microbiol 2008, 58:2271-2274.
33. Zhang X., Sun L., Qiu F., McLean R.J.C., Jiang R., Song W. Rheinheimera tangshanensis sp. nov., a rice root-associated bacterium. Int J Syst Evol Microbiol 2008, 58:2420-2424.
34. Giovannoni S.J., Stingl U. Molecular diversity and ecology of microbial plankton. Nature 2005, 437:343-348.
35. Zhou M.Y., Chen X.L., Zhao H.L., Dang H.Y., Luan X.W., Zhang X.Y., et al. Diversity of both the cultivable protease-producing bacteria and their extracellular proteases in the sediments of the south China. Microb Ecol 2009, (March).
36. Chen W.M., Laevens S., Lee T.M., Coenye T., de Vos P., Mergeay M., et al. Ralstonia taiwanensis sp. nov., isolated from root nodules of Mimosa species and sputum of a cystic fibrosis patient. Int J Syst Evol Microbiol 2001, 51:1729-1735.
37. Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 1999, 41:95-98.
38. Kumar S., Tamura K., Nei M. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 2004, 5:150-163.
39. Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The Clustal_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 1997, 24:4876-4882.
40. Kimura M. The neutral theory of molecular evolution 1983, Cambridge University Press, Cambridge.
41. Saitou N., Nei M. The neighbor-joining method: a new method for constructing phylogenetic trees. Mol Biol Evol 1987, 4:406-425.
42. Felsenstein J. Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 1981, 17:368-376.
43. Kluge A.G., Farris F.S. Quantitative phyletics and the evolution of anurans. Syst Zool 1969, 18:1-32.
44. Felsenstein J. PHYLIP (phylogeny inference package), version 3.5c. Distributed by the author 1993, Department of Genome Sciences, University of Washington, Seattle, USA.
45. Chun J., Lee J.-H., Jung Y., Kim M., Kim S., Kim B.K., et al. EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 2007, 57:2259-2261.
46. Maidak B.L., Cole J.R., Lilburn T.G., Parker C.T., Saxman P.R., Farris R.J., et al. The RDP-II (Ribosomal Database Project). Nucleic Acids Res 2001, 29:173-174.
47. Barry A.I. Procedures and theoretical considerations for testing antimicrobial agents in agar media. Antibiotics in laboratory medicine 1980, 10-16. William & Wilkins, Baltimore. V. Logan (Ed.).
48. Stanier R.Y., Kunisawa R., Mandel M., Cohen-Bazire G. Purification and properties of unicellular blue-green algae (order Chroococcales). Bacteriol Rev 1971, 35:171-205.
49. Saito M., Seki M., Iida K., Nakayama H., Yoshida S. A novel agar medium to detect hydrogen peroxide-producing bacteria based on the Prussian blue-forming reaction. Microbial Immunol 2007, 51:889-892.
50. Trinder P., Webster D. Determination of HDL-cholesterol using 2,4,6-tribromo-3-hydroxybenzoic acid with a commercial CHOD-PAP reagent. Ann Clin Biochem 1984, 5:430-433.
51. Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 1970, 227:680-685.
52. Pistorius E.K., Voss H. Some properties of a basic l-amino acid oxidase from Anacystis nidulans. Biochim Biophys Acta 1980, 611:227-240.
53. Braun M., Kim J.M., Schmid R.D. Purification and some properties of an extracellular l-amino acid oxidase from Cellulomonas cellulans AM8 isolated from soil. Appl Microbiol Biotechnol 1992, 37:594-598.
54. Brearley G.M., Price C.P., Atkinson T., Hammond P.M. Purification and partial characterization of a broad-range l-amino acid oxidase from Bacillus carotarum 2Pfa isolated from soil. Appl Microbiol Biotechnol 1994, 41:670-676.
55. Geueke B., Hummel W. A new bacterial l-amino acid oxidase with a broad substrate specificity: purification and characterization. Enzyme Microb Technol 2002, 31:77-87.
56. 2 from peptone. J Bacteriol 2008, 190:4716-4721.
57. Yu E.K.C., de Voe J.W. l-Cysteine oxidase activity in the membrane of Neisseria meningitidis. J Bacteriol 1980, 145:280-287.
58. Koyama H. Purification and characterization of a novel l-phenylalanine oxidase (deaminating and decarboxylating) [from Pseudomonas sp. P-501]. J Biochem 1982, 92:1235-1240.
59. Boehmer A., Mueller P., Passarge M., Liebs P., Honeck H., Mueller H.G. A novel l-glutamate oxidase from Streptomyces endus. Purification and properties. Eur J Biochem 1989, 182:327-332.
60. Sikora L., Marzluf G.A. Regulation of l-amino acid oxidase and of D-amino acid oxidase in Neurospora crassa. Mol Gen Genet 1982, 186:33-39.
61. Davis M.A., Askin M.C., Hynes M.J. Amino acid catabolism by an areA-regulated gene encoding an l-amino acid oxidase with broad substrate specificity in Aspergillus nidulans. Appl Environ Microbiol 2005, 71:3551-3555.
62. Sobrino O.J., Rodríguez J.M., Moreira W.L., Fernández M.F., Sanz B., Hernández P.E. Antibacterial activity of Lactobacillus sake isolated from dry fermented sausages. Int J Food Microbiol 1991, 13:1-10.
63. Safdar N., Maki D.G. The commonality of risk factors for nosocomial colonization and infection with antimicrobial-resistant Staphylococcus aureus, enterococcus, gram-negative bacilli, Clostridium difficile, and Candida. Ann Intern Med 2002, 136:834-844.
64. Austin B. Vibrios as causal agents of zoonoses. Vet Microbiol 2009, (March).