Identification of Colletotrichum species associated with anthracnose disease of coffee in Vietnam

European Journal of Plant Pathology

Volumn 127, Issue 1, 2010, Pages 73-87

  Nguyen, Phuong Thi Hang ^a,c   Pettersson, Olga Vinnere ^a   Olsson, Peter ^b   Liljeroth, Erland ^a  

^a SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^b Department of Chemistry   (Sweden)

^c Department of Plant Molecular Pathology and Biological Control   (Viet Nam)

Author keywords

Coffee berry anthracnose; Colletotrichum gloeosporioides; Pathogenicity test; Phylogenetic analysis; Tartrate metabolism

Indexed keywords

FUNGUS; GENETIC ANALYSIS; GROWTH RATE; LESION; METABOLISM; MORPHOLOGY; PATHOGENICITY; PHYLOGENETICS;

VIET NAM;

COFFEA; COLLETOTRICHUM; COLLETOTRICHUM BONINENSE; COLLETOTRICHUM CAPSICI; COLLETOTRICHUM KAHAWAE; FUNGI; GLOMERELLA CINGULATA;

EID: 77950022912     PISSN: 09291873     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10658-009-9573-5     Document Type: Article

References (43)

1. Abang, M. M., Asiedu, R., Hoffmann, P., Wolf, G. A., Mignouna, H. D., & Winter, S. (2006). Pathogenic and genetic variability among Colletotrichum gloeosporioides isolates from different yam hosts in the agroecological zones in Nigeria. Journal of Phytopathology, 154, 51-61.
2. Bock, K. R. (1956). Investigations on coffee berry disease-laboratory studies. East African Agricultural and Forestry Journal, 22, 97-103.
3. Bridge, P. D., Waller, J. M., Davies, D., & Buddie, A. G. (2008). Variability of Colletotrichum kahawae in relation to other Colletotrichum species from tropical perennial crops and the development of diagnostic techniques. Journal of Phytopathology, 156, 274-280.
4. Cannon, P. F., Buddie, A. G., & Bridge, P. D. (2008). The typification of Colletotrichum gloeosporioides. Mycotaxon, 104, 189-204.
5. Chen, Z. J., Ribeiro, A., Silva, M. C., et al. (2003). Heat shock-induced susceptibility of green coffee leaves and berries to Colletotrichum gloeosporioides and its association to PR and hsp70 gene expression. Physiological and Molecular Plant Pathology, 63, 181-190.
6. Chen, Z. J., Liang, J., & Rodrigues, C. J. J. (2005). Colletotrichum gloeosporioides can overgrow Colletotrichum kahawae on green coffee berries first inoculated with C. kahawae. Biotechnology Letters, 27, 679-682.
7. Derso, E., & Waller, J. M. (2003). Variation among Colletotrichum isolates from diseased coffee berries in Ethiopia. Crop Protection, 22, 561-565.
8. Ewing, B., & Green, P. (1998). Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Research, 8, 186-194.
9. Farr, D. F., Aime, M. C., Rossman, A. Y., & Palm, M. E. (2006). Species of Colletotrichum on agavaceae. Mycological Research, 110, 1395-1408.
10. Freeman, S. (2000). Genetic diversity and host specificity of Colletotrichum species on various fruits. In D. Prusky, S. Freeman & M. B. Dickman (Eds.), Colletotrichum: Host specificity, pathology, and host-pathogen interaction (pp. 131-144). St Paul: APS.
11. Gielink, A., & Vermeulen, H. (1983). The ability of American and African Colletotrichum isolates to cause coffee berry disease symptoms and the association of some isolates with Glomerella cingulata. European Journal of Plant Pathology, 89, 188-190.
12. Kenny, M. K., Galea, V. J., Scott, P. T., & Price, T. V. (2006). A comparison of Colletotrichum species associated with berry diseases of Coffea arabica L. Pest and disease incursion: risk, threats and management in Papua New Guinea. ACIAR Technical Reports, 62, 192-199.
13. Li, K. N., Rouse, D. I., & German, T. L. (1994). PCR primers that allow intergeneric differentiation of ascomycetes and their application to Verticillium spp. Applied and Environmental Microbiology, 60, 4324-4331.
14. Lu, G., Cannon, P. F., Reid, A., & Simmons, C. M. (2004). Diversity and molecular relationships of endophytic Colletotrichum isolates from the Iwokrama Forest Reserve, Guyana. Mycological Research, 108, 53-63.
15. Lubbe, C. M., Denman, S., Cannon, P. F., Groenewald, J. Z., Lamprecht, S. C., & Crous, P. W. (2004). Characterization of Colletotrichum species associated with diseases of Proteaceae. Mycologia, 96, 1268-1279.
16. Martinez-Culebras, P. V., Querol, A., Suarez-Fernandez, M. B., Garcia-Lopez, M. D., & Barrio, E. (2003). Phylogenetic relationships among Colletotrichum pathogens of strawberry and design of PCR primers for their identification. Journal of Phytopathology, 151, 135-143.
17. Masaba, D. M., & Waller, J. M. (1992). Coffee berry disease: The current status. In J. A. Bailey & M. J. Jeger (Eds.), Colletotrichum: Biology, pathology and control (pp. 237-249). Wallingford: CAB International.
18. Mills, P. R., Hodson, A., & Brown, A. E. (1992). Molecular differentiation of Colletotrichum gloeosporioides isolates infecting tropical fruits. In J. A. Bailey & M. J. Jeger (Eds.), Colletotrichum: Biology, pathology and control (pp. 269-288). Wallingford: CAB International.
19. Mordue, J. E. M. (1971). CMI descriptions of pathogenic fungi and bacteria. Kew: Commonwealth Mycological Institute.
20. Moriwaki, J., Sato, T., & Tsukiboshi, T. (2003). Morphological and molecular characterization of Colletotrichum boninense sp. nov. from Japan. Mycoscience, 44, 47-53.
21. Nguyen, T. H. P., Säll, T., Bryngelsson, T., & Liljeroth, E. (2009). Variation among Colletotrichum gloeosporioides isolates from infected coffee berries at different locations in Vietnam. Plant Pathology, 58, 898-909.
22. Photita, W., Taylor, P. W. J., Ford, R., Hyde, K. D., & Lumyong, S. (2005). Morphological and molecular characterization of Colletotrichum species from herbaceous plants in Thailand. Fungal Diversity, 18, 117-133.
23. Pinkert, C. (2004). Nutrient & quality analysis of coffee cherries in Huong Hoa district, Vietnam. Wageningen: Plant research International BV.
24. Shenoy, B. D., Jeewon, R., Lam, W. H., et al. (2007). Morpho-molecular characterisation and epitypification of Colletotrichum capsici (Glomerellaceae, Sordariomycetes), the causative agent of anthracnose in chilli. Fungal Diversity, 27, 197-211.
25. Smith, B. J., & Black, L. L. (1990). Morphological, cultural, and pathogenic variation among Colletotrichum species isolated from strawberry. Plant Disease, 74, 69-76.
26. Sreenivasaprasad, S., Brown, A. E., & Mills, P. R. (1992). DNA sequence variation and interrelationships among Colletotrichum species causing strawberry anthracnose. Physiological and Molecular Plant Pathology, 41, 265-281.
27. Sreenivasaprasad, S., Brown, A. E., & Mills, P. R. (1993). Coffee berry disease pathogen in Africa: genetic structure and relationship to the group species Colletotrichum gloeosporioides. Mycological Research, 97, 995-1000.
28. Sreenivasaprasad, S., Mills, P. R., Meehan, B. M., & Brown, A. E. (1996a). Phylogeny and systematics of 18 Colletotrichum species based on ribosomal DNA spacer sequences. Genome, 39, 499-512.
29. Sreenivasaprasad, S., Sharada, K., Brown, A. E., & Mills, P. R. (1996b). PCR-based detection of Colletotrichum acutatum on strawberry. Plant Pathology, 45, 650.
30. Sutton, B. C. (1980). The coelomycetes. Fungi imperfecti with pycnidia, acervuli and stromata. Kew: Commonwealth Mycological Institute.
31. Sutton, B. C. (1992). The genus Glomerella and its anamorph Colletotrichum. In J. A. Bailey & M. J. Jeger (Eds.), Colletotrichum: Biology, pathology and control (pp. 1-26). Wallingford: CAB International.
32. Talhinhas, P., Sreenivasaprasad, S., Neves-Martins, J., & Oliveira, H. (2005). Molecular and phenotypic analyses reveal association of diverse Colletotrichum acutatum groups and a low level of Colletotrichum gloeosporioides with olive anthracnose. Applied and Environmental Microbiology, 71, 2987-2998.
33. Than, P. P., Jeewon, R., Hyde, K. D., Pongsupasamit, S., Mongkolporn, O., & Taylor, P. W. J. (2008). Characterization and pathogenicity of Colletotrichum species associated with anthracnose on chilli (Capsicum spp.) in Thailand. Plant Pathology, 57, 562-572.
34. Tozze, H. J., Massola, N. M., Camara, M. P. S., et al. (2009). First report of Colletotrichum boninense causing anthracnose on pepper in Brazil. Plant Disease, 93, 106.
35. Tran, K. L., Vu, T. T. N., & Ngo, T. X. T. (1998). Results of investigation of coffee berry disease and die-back on Arabica coffee var. Catimor. Monthly Journal of Science, Technology and Economic Management (in Vietnamese), 6, 253-255.
36. Ureña-Padilla, A. R., Mackenzie, S. J., Bowen, B. W., & Legard, D. E. (2002). Etiology and population genetics of Colletotrichum spp. causing crown and fruit rot of strawberry. Phytopathology, 92, 1245-1252.
37. Varzea, V. M., Rodrigues, C. J., Jr., & Lewis, B. G. (2002). Distinguishing characteristics and vegetative compatibility of Colletotrichum kahawe in comparison with other related species from coffee. Plant Pathology, 51, 202.
38. Vinnere, O., Fatehi, J., Wright, S. A. I., & Gerhardson, B. (2002). The causal agent of anthracnose of Rhododendron in Sweden and Latvia. Mycological Research, 106, 60-69.
39. Von Arx, J. A. (1957). Die arten der Gattung Colletotrichum cda. Phytopathologische Zeitschrift, 29, 413-468.
40. Waller, J. M. (1992). Colletotrichum diseases of perennial and other cash crops. In J. A. Bailey & M. J. Jeger (Eds.), Colletotrichum: Biology, pathology and control (pp. 131-142). Wallingford: CAB International.
41. Waller, J. M., Bridge, P. D., Black, B., & Hakiza, G. (1993). Characterization of the coffee berry disease pathogen Colletotrichum kahawae sp. nov. Mycological Research, 97, 989-994.
42. White, T., Bruns, T., Lee, S., & Taylor, J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR Protocols: A Guide to Methods and Applications, 18, 315-322.
43. Zar, J. (1984). Biostatistical analysis. Englewood Cliffs: Prentice-Hall.