Bacterial phosphate metabolism and its application to phosphorus recovery and industrial bioprocesses

Journal of Bioscience and Bioengineering

Volumn 109, Issue 5, 2010, Pages 423-432

  Hirota, Ryuichi ^a   Kuroda, Akio ^a   Kato, Junichi ^a   Ohtake, Hisao ^b  

^a HIROSHIMA UNIVERSITY   (Japan)

^b OSAKA UNIVERSITY   (Japan)

Author keywords

Bacterial phosphate metabolism; EBPR process; Heatphos; P recovery and recycling; Polyphosphate

Indexed keywords

BACTERIAL PHOSPHATE METABOLISM; EBPR PROCESS; HEATPHOS; POLYPHOSPHATE; POLYPHOSPHATES;

BACTERIOLOGY; CHEMICALS REMOVAL (WATER TREATMENT); COMPUTER SOFTWARE REUSABILITY; FERTILIZERS; METABOLISM; PHOSPHORUS; RECYCLING; WASTEWATER; WASTEWATER RECLAMATION; WASTEWATER TREATMENT;

BIOLOGICAL WATER TREATMENT;

4',6 DIAMIDINO 2 PHENYLINDOLE; ABC TRANSPORTER; ALKALINE PHOSPHATASE; AMINO ACID; BACTERIAL ENZYME; BETA GALACTOSIDASE; BIOPOLYMER; CALCIUM; CALCIUM CHLORIDE; FERTILIZER; FRUCTOKINASE; GLUCOKINASE; GLYCOGEN; HISTIDINE; HYBRID PROTEIN; LYASE; MALTOSE; ORGANOPHOSPHATE; PHOSPHITE; PHOSPHONIC ACID DERIVATIVE; PHOSPHORUS; PHOSPHOTRANSFERASE; PHYTOHEMAGGLUTININ; POLYACRYLAMIDE GEL; PROTEINASE; RECOMBINANT DNA; RECOMBINANT ENZYME; RIBOSE; RIBOSOME PROTEIN; UNINDEXED DRUG;

AMINO TERMINAL SEQUENCE; BACTERIAL GENE; BACTERIAL METABOLISM; BACTERIAL STRAIN; BACTERIUM MUTANT; BIOPROCESS; BIOREMEDIATION; CHEMICAL BOND; CYANOBACTERIUM; DECOMPOSITION; ENZYME ACTIVITY; ESCHERICHIA COLI; GENE CLUSTER; KLEBSIELLA AEROGENES; MOLECULAR MECHANICS; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; PHOSPHATE METABOLISM; PROTEIN DEGRADATION; PROTEIN EXPRESSION; REVIEW; SLUDGE; SYNTHESIS; WASTE WATER MANAGEMENT;

BACTERIAL PHYSIOLOGICAL PHENOMENA; BIODEGRADATION, ENVIRONMENTAL; BIOREACTORS; INDUSTRIAL MICROBIOLOGY; MODELS, BIOLOGICAL; PHOSPHATES; PHOSPHORUS; SEWAGE; WATER POLLUTANTS, CHEMICAL; WATER PURIFICATION;

BACTERIA (MICROORGANISMS);

EID: 77949903823     PISSN: 13891723     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jbiosc.2009.10.018     Document Type: Review

References (66)

1. Abelson P.H. A potential phosphate crisis. Science 283 (1999) 2015
2. Cordell D., Drangert J., and White S. The story of phosphorus: global food security and food for thought. Global Environ. Change 19 (2009) 292-305
3. Hammond A.L. Phosphate replacements: problems with the washday miracle. Science 172 (1971) 361-363
4. Kato J., Yamada K., Muramatsu A., Hardoyo, and Ohtake H. : Genetic improvement of Escherichia coli for enhanced biological removal of phosphate from wastewater. Appl. Environ. Microbiol. 59 (1993) 3744-3749
5. Ohtake H., Takahashi K., Tsuzuki Y., and Toda K. Uptake and release of phosphate by a pure culture of Acinetobacter carcoaceticus. Water Res. 19 (1985) 1587-1594
6. Sedlak R.I. Phosphorus and Nitrogen Removal from Municipal Wastewater. 2nd ed. (1991), Lewis Publishers, New York, USA
7. Kulaev I.S., and Vagabov V.M. Polyphosphate metabolism in micro-organisms. Adv. Microbiol. Physiol. 24 (1983) 83-171
8. Harold F.M. Inorganic polyphosphates in biology: structure, metabolism, and function. Bacteriol. Rev. 30 (1966) 772-794
9. Kornberg A. Inorganic polyphosphate: toward making a forgotten polymer unforgettable. J. Bacteriol. 177 (1995) 491-496
10. Wanner B.L. Molecular genetics of carbon-phosphorus bond cleavage in bacteria. Biodegradation 5 (1994) 175-184
11. Chen C.M., Ye Q.Z., Zhu Z.M., Wanner B.L., and Walsh C.T. Molecular biology of carbon-phosphorus bond cleavage. Cloning and sequencing of the phn (psiD) genes involved in alkylphosphonate uptake and C-P lyase activity in Escherichia coli. B. J. Biol. Chem. 265 (1990) 4461-4471
12. Wackett L.P., Shames S.L., Venditti C.P., and Walsh C.T. Bacterial carbon-phosphorus lyase: products, rates, and regulation of phosphonic and phosphinic acid metabolism. J. Bacteriol. 169 (1987) 710-717
13. i. J. Bacteriol. 173 (1991) 587-600
14. Dyhrman S.T., Chappell P.D., Haley S.T., Moffett J.W., Orchard E.D., Waterbury J.B., and Webb E.A. Phosphonate utilization by the globally important marine diazotroph Trichodesmium. Nature 439 (2006) 68-71
15. Kato J., Ito A., Nikata T., and Ohtake H. Phosphate taxis in Pseudomonas aeruginosa. J. Bacteriol. 174 (1992) 5149-5151
16. Kato J., Kim H., Takiguchi N., Kuroda A., and Ohtake H. Pseudomonas aeruginosa as a model microorganism for investigation of chemotactic behaviors in ecosystem. J. Biosc. Bioeng. 106 (2008) 1-7
17. Ahn K., and Kornberg A. Polyphosphate kinase from Escherichia coli. Purification and demonstration of a phosphoenzyme intermediate. J. Biol. Chem. 265 (1990) 11734-11739
18. Tzeng C.M., and Kornberg A. The multiple activities of polyphosphate kinase of Escherichia coli and their subunit structure determined by radiation target analysis. J. Biol. Chem. 275 (2000) 3977-3983
19. Zhu Y., Huang W., Lee S.S., and Xu W. Crystal structure of a polyphosphate kinase and its implications for polyphosphate synthesis. EMBO Rep. 6 (2005) 681-687
20. Akiyama M., Crooke E., and Kornberg A. The polyphosphate kinase gene of Escherichia coli. Isolation and sequence of the ppk gene and membrane location of the protein. J. Biol. Chem. 267 (1992) 22556-22561
21. Akiyama M., Crooke E., and Kornberg A. An exopolyphosphatase of Escherichia coli. The enzyme and its ppx gene in a polyphosphate operon. J. Biol. Chem. 268 (1993) 633-639
22. Kuroda A., Murphy H., Cashel M., and Kornberg A. Guanosine tetra- and pentaphosphate promote accumulation of inorganic polyphosphate in Escherichia coli. J. Biol. Chem. 272 (1997) 21240-21243
23. Kuroda A., Tanaka S., Ikeda T., Kato J., Takiguchi N., and Ohtake H. Inorganic polyphosphate kinase is required to stimulate protein degradation and for adaptation to amino acid starvation in Escherichia coli. Proc. Natl. Acad. Sci. USA 96 (1999) 14264-14269
24. Kuroda A., Nomura K., Ohtomo R., Kato J., Ikeda T., Takiguchi N., Ohtake H., and Kornberg A. Role of inorganic polyphosphate in promoting ribosomal protein degradation by the Lon protease in E. coli. Science 293 (2001) 705-708
25. Nomura K., Kato J., Takiguchi N., Ohtake H., and Kuroda A. Effects of inorganic polyphosphate on the proteolytic and DNA-binding activities of Lon in Escherichia coli. J. Biol. Chem. 279 (2004) 34406-34410
26. Kato J., Yamamoto T., Yamada K., and Ohtake H. Cloning, sequence and characterization of the polyphosphate kinase-encoding gene (ppk) of Klebsiella aerogenes. Gene 137 (1993) 237-242
27. Hardoyo, Yamada K., Shinjo H., Kato J., and Ohtake H. Production and release of polyphosphate by a genetically engineered strain of Escherichia coli. Appl. Environ. Microbiol. 60 (1994) 3485-3490
28. Morohoshi T., Maruo T., Shirai Y., Kato J., Ikeda T., Takiguchi N., Ohtake H., and Kuroda A. Accumulation of inorganic polyphosphate in phoU mutants of Escherichia coli and Synechocystis sp. strain PCC6803. Appl. Environ. Microbiol. 68 (2002) 4107-4110
29. Morohoshi T., Yamashita T., Kato J., Ikeda T., Takiguchi N., Ohtake H., and Kuroda A. A method for screening polyphosphate-accumulating mutants which remove phosphate efficiently from synthetic wastewater. J. Biosci. Bioeng. 95 (2003) 637-640
30. Motomura K., Takiguchi N., Ohtake H., and Kuroda A. Polyamines affect polyphosphate accumulation in Escherichia coli. J. Environ. Biotech. 6 (2006) 41-46
31. Lee D., Kim M., and Chung J. Relationship between solid retention time and phosphorus removal in anaerobic-intermittent aeration process. J. Biosci. Bioeng. 103 (2007) 338-344
32. Mino T., Van Loosdrecht M.C.M., and Heijnen J.J. Microbiology and biochemistry of the enhanced biological phosphate removal process. Water Res. 32 (1998) 3193-3207
33. Lemos P.C., Viana C., Salgueiro E.N., Ramos A.M., Crespo J.P.S.G., and Reis M.A.M. Effect of carbon source on the formation of polyhydroxyalkanoates (PHA) by a phosphate-accumulating mixed culture. Enzyme Microb. Technol. 22 (1998) 662-671
34. Satoh H., Mino T., and Matsuo T. Uptake of organic substrates and accumulation of polyhydroxyalkanoates linked with glycolysis of intracellular carbohydrates under anaerobic conditions in the biological excess phosphate removal process. Water Sci. Technol. 26 (1992) 933-942
35. Straichan M., Golecki J.R., and Schön G. Polyphosphate-accumulating bacteria from sewage plants with different processes for biological phosphorus removal. FEMS Microbiol. Lett. 73 (1990) 113-124
36. Wagner M., Erhart R., Manz W., Amann R., Lemmer H., Wedi D., and Schleifer K.H. Development of an rRNA-targeted oligonucleotide probe specific for the genus Acinetobacter and its application for in situ monitoring in activated sludge. Appl. Environ. Microbiol. 60 (1994) 792-800
37. Hesselmann R.P., Werlen C., Hahn D., van der Meer J.R., and Zehnder A.J. Enrichment, phylogenetic analysis and detection of a bacterium that performs enhanced biological phosphate removal in activated sludge. Syst. Appl. Microbiol. 22 (1999) 454-465
38. Garcia Martin H., Ivanova N., Kunin V., Warnecke F., Barry K.W., McHardy A.C., Yeates C., He S., Salamov A.A., Szeto E., Dalin E., Putnam N.H., Shapiro H.J., Pangilinan J.L., Rigoutsos I., Kyrpides N.C., Blackall L.L., McMahon K.D., and Hugenholtz P. Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities. Nat. Biotechnol. 24 (2006) 1263-1269
39. Kuroda A., Takiguchi N., Gotanda T., Nomura K., Kato J., Ikeda T., and Ohtake H. A simple method to release polyphosphate from activated sludge for phosphorus reuse and recycling. Biotechnol. Bioeng. 78 (2002) 333-338
40. Bond P.L., Keller J., and Blackall L.L. Anaerobic phosphate release from activated sludge with enhanced biological phosphorus removal. A possible mechanism of intracellular pH control. Biotechnol. Bioeng. 63 (1999) 507-515
41. Takiguchi N., Kuroda A., Kato J., Nukanobu K., and Ohtake H. Pilot plant tests on the novel process for phosphorus recovery from municipal wastewater. J. Chem. Eng. Japan 36 (2003) 1143-1146
42. Booker N.A., Priestley A.J., and Fraser I.H. Struvite formation in wastewater treatment plants: opportunities for nutrient recovery. Environ. Technol. 20 (1999) 777-782
43. Stratful I., Scrimshaw M.D., and Lester J.N. Conditions influencing the precipitation of magnesium ammonium phosphate. Water Res. 35 (2001) 4191-4199
44. Williams S. Struvite precipitation in the sludge stream at slough wastewater treatment plant and opportunities for phosphorus recovery. Environ. Technol. 20 (1999) 743-747
45. Ueno Y., and Fujii M. Three years experience of operating and selling recovered struvite from full-scale plant. Environ. Technol. 22 (2001) 1373-1381
46. Richardson A.E. Prospects for using soil microorganisms to improve the acquisition of phosphorus by plants. Aust. J. Plant Physiol. 28 (2001) 897-906
47. Whitelaw M. Growth promotion of plants inoculated with phosphate-solubilizing fungi. Adv. Agronomy 6 (2000) 99-151
48. Nagamine S., Ueda T., Masuda I., Mori T., Sasaoka E., and Joko I. Removal of phosphorus from wastewater by crystallization on the surface of macroporous TiO2 with a fibrous microstructure. Ind. Eng. Chem. Res. 42 (2003) 4748-4752
49. Johansson L., and Gustafsson J.P. Phosphate removal using blast furnace slags and opoka-mechanisms. Water Res. 34 (2000) 259-265
50. Ebie Y., Kondo T., Xu K., Kadoya N., Mouri M., Maruyama O., Noritake S., and Inamori Y. Recovery oriented phosphorus adsorption process in decentralized advanced Johkasou. Water Sci. Technol. 57 (2008) 1977-1981
51. Midorikawa I., Aoki H., Omori A., Shimizu T., Kawaguchi Y., Kassai K., and Murakami T. Recovery of high purity phosphorus from municipal wastewater secondary effluent by a high-speed adsorbent. Water Sci. Technol. 58 (2008) 1601-1607
52. Moriyama K., Kojima T., Minawa Y., Matsumoto S., and Nakamachi K. Development of artificial seed crystal for crystallization of calcium phosphate. Environ. Technol. 22 (2001) 1245-1252
53. Schipper W.J., Klapwijk A., Potjer B., Rulkens W.H., Temmink B.G., Kiestra F.D., and Lijmbach A.C. Phosphate recycling in the phosphorus industry. Environ. Technol. 22 (2001) 1337-1345
54. Kubo H., Yokoyama K., Nakajima K., Hashimoto S., Yamaguchi K., and Nagasaka T. The application of material stock and flow accounting to phosphorus in Japan. J. Environ. Eng. Manage. 18 (2008) 47-53
55. Ohtake H., Omasa K., and Honda K. Bio-based production of rock phosphate for resource recycling and environmental protection. J. Biotechnol. 136S (2008) 5602
56. Yamagata Y., Watanabe H., Saitoh M., and Namba T. Volcanic production of polyphosphate and its relevance to prebiotic evolution. Nature 352 (1991) 516-520
57. Bork P., Sander C., and Valencia A. Convergent evolution of similar enzymatic function on different protein folds: the hexokinase, ribokinase, and galactokinase families of sugar kinases. Protein Sci. 2 (1993) 31-40
58. Szymona M., and Ostrowski W. Inorganic polyphosphate glucokinase of Mycobacterium phlei. Biochim. Biophys. Acta 85 (1964) 283-295
59. Szymona M., and Widomski J. A kinetic study on inorganic polyphosphate glucokinase from Mycobacterium tuberculosis H37RA. Physiol. Chem. Phys. 6 (1974) 393-404
60. Wood H.G., and Goss N.H. Phosphorylation enzymes of the propionic acid bacteria and the roles of ATP inorganic pyrophosphate, and polyphosphates. Proc. Natl. Acad. Sci. USA 82 (1985) 312-315
61. Nakamura K., Hiraishi A., Yoshimi Y., Kawaharasaki M., Masuda K., and Kamagata Y. Microlunatus phosphovorus gen. nov., sp. nov., a new gram-positive polyphosphate-accumulating bacterium isolated from activated sludge. Int. J. Syst. Bacteriol. 45 (1995) 17-22
62. Tanaka S., Lee S.O., Hamaoka K., Kato J., Takiguchi N., Nakamura K., Ohtake H., and Kuroda A. Strictly polyphosphate-dependent glucokinase in a polyphosphate-accumulating bacterium, Microlunatus phosphovorus. J. Bacteriol. 185 (2003) 5654-5656
63. Tanaka S., Kuroda S., Kato J., Ikeda T., Takiguchi N., and Ohtake H. A sensitive method for detecting AMP by utilizing polyphosphate-dependent ATP regeneration and bioluminescence reactions. Biochem. Eng. J. 9 (2001) 193-197
64. Iwamoto S., Motomura K., Shinoda Y., Urata M., Kato J., Takiguchi N., Ohtake H., Hirota R., and Kuroda A. Use of an Escherichia coli recombinant producing thermostable polyphosphate kinase as an ATP regenerator to produce fructose 1,6-diphosphate. Appl. Environ. Microbiol. 73 (2007) 5676-5678
65. Sato M., Masuda Y., Kirimura K., and Kino K. Thermostable ATP regeneration system using polyphosphate kinase from Thermosynechococcus elongatus BP-1 for D-amino acid dipeptide synthesis. J. Biosci. Bioeng. 103 (2007) 179-184
66. Sato M., Kirimura K., and Kino K. Substrate specificity of thermostable D-alanine-D-alanine ligase from Thermotoga maritima ATCC 43589. Biosci. Biotechnol. Biochem. 70 (2006) 2790-2792