Visualizing SNP statistics in the context of linkage disequilibrium using LD-Plus

Bioinformatics

Volumn 26, Issue 4, 2010, Pages 578-579

  Bush, William S ^a   Dudek, Scott M ^a   Ritchie, Marylyn D ^a  

^a VANDERBILT UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; COMPUTER PROGRAM; GENE LINKAGE DISEQUILIBRIUM; GENETIC DATABASE; GENOTYPE; HAPLOTYPE; SINGLE NUCLEOTIDE POLYMORPHISM;

ALGORITHMS; DATABASES, GENETIC; GENOTYPE; HAPLOTYPES; LINKAGE DISEQUILIBRIUM; POLYMORPHISM, SINGLE NUCLEOTIDE; SOFTWARE;

EID: 77949525386     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btp678     Document Type: Note

References (6)

1. Barrett, J.C. et al. (2005) Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics, 21, 263-265.
2. Bush, W. et al. (2009) Genetic variation in the rhythmonome: ethnic variation and haplotype structure in candidate genes for arrhythmias. Pharmacogenomics, 10, 1043-1053.
3. Gudmundsson, J. et al. (2009) Common variants on 9q22.33 and 14q13.3 predispose to thyroid cancer in European populations. Nat. Genet., 41, 460-464.
4. Johnson, A.D. et al. (2008) SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap. Bioinformatics, 24, 2938-2939.
5. Karolchik, D. et al. (2008) The UCSC Genome Browser Database: 2008 update. Nucleic Acids Res., 36, D773-D779.
6. Sile, S. et al. (2008) Haplotype diversity in four genes (CLCNKA, CLCNKB, BSND, NEDD4L) involved in renal salt reabsorption. Hum. Hered., 65, 33-46.