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Volumn 60, Issue 3, 2010, Pages 504-509

Gallaecimonas pentaromativorans gen. nov., sp. nov., a bacterium carrying 16S rRNA gene heterogeneity and able to degrade high-molecular-mass polycyclic aromatic hydrocarbons

Author keywords

[No Author keywords available]

Indexed keywords

FATTY ACID; POLYCYCLIC AROMATIC HYDROCARBON; RNA 16S;

EID: 77949389509     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.013532-0     Document Type: Article
Times cited : (15)

References (35)
  • 1
    • 0036827429 scopus 로고    scopus 로고
    • Paenibacillus turicensis sp. nov., a novel bacterium harbouring heterogeneities between 16S rRNA genes
    • Bosshard, P. P., Zbinden, R. & Altwegg, M. (2002). Paenibacillus turicensis sp. nov., a novel bacterium harbouring heterogeneities between 16S rRNA genes. Int J Syst Evol Microbiol 52, 2241-2249.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 2241-2249
    • Bosshard, P.P.1    Zbinden, R.2    Altwegg, M.3
  • 2
    • 0036740805 scopus 로고
    • Rheinheimera baltica gen. nov., sp. nov., a blue-coloured bacterium isolated from the central Baltic Sea
    • 2002
    • Brettar, I., Christen, R. & Höfle, M. G. (2002). Rheinheimera baltica gen. nov., sp. nov., a blue-coloured bacterium isolated from the central Baltic Sea. Int J Syst Evol Microbiol 52, 1851-1857.
    • (1851) Int J Syst Evol Microbiol , vol.52
    • Brettar, I.1    Christen, R.2    Höfle, M.G.3
  • 3
    • 33749015733 scopus 로고    scopus 로고
    • Rheinheimera perlucida sp. nov., a marine bacterium of the Gammaproteobacteria isolated from surface water of the central Baltic Sea
    • Brettar, I., Christen, R. & Höfle, M. G. (2006). Rheinheimera perlucida sp. nov., a marine bacterium of the Gammaproteobacteria isolated from surface water of the central Baltic Sea. Int J Syst Evol Microbiol 56, 2177-2183.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 2177-2183
    • Brettar, I.1    Christen, R.2    Höfle, M.G.3
  • 4
    • 0034609440 scopus 로고    scopus 로고
    • Characterization of the three ribosomal RNA operons rrnA, rrnB and rrnC, from Brucella melitensis
    • Bricker, B. J. (2000). Characterization of the three ribosomal RNA operons rrnA, rrnB and rrnC, from Brucella melitensis. Gene 255, 117-126.
    • (2000) Gene , vol.255 , pp. 117-126
    • Bricker, B.J.1
  • 5
    • 0019513663 scopus 로고
    • Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli
    • Brosius, J., Dull, T. J., Sleeter, D. D. & Noller, H. F. (1981). Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J Mol Biol 148, 107-127.
    • (1981) J Mol Biol , vol.148 , pp. 107-127
    • Brosius, J.1    Dull, T.J.2    Sleeter, D.D.3    Noller, H.F.4
  • 6
    • 0017758250 scopus 로고
    • A rapid method for the base ratio determination of bacterial DNA
    • Cashion, P., Holder-Franklin, M. A., McCully, J. & Franklin, M. (1977). A rapid method for the base ratio determination of bacterial DNA. Anal Biochem 81, 461-466.
    • (1977) Anal Biochem , vol.81 , pp. 461-466
    • Cashion, P.1    Holder-Franklin, M.A.2    McCully, J.3    Franklin, M.4
  • 7
    • 0030024243 scopus 로고    scopus 로고
    • Sequence heterogeneities among 16S ribosomal RNA sequences, and their effect on phylogenetic analysis at the species level
    • Cilia, V., Lafay, B. & Christen, R. (1996). Sequence heterogeneities among 16S ribosomal RNA sequences, and their effect on phylogenetic analysis at the species level. Mol Biol Evol 13, 451-461.
    • (1996) Mol Biol Evol , vol.13 , pp. 451-461
    • Cilia, V.1    Lafay, B.2    Christen, R.3
  • 8
    • 0029027263 scopus 로고
    • Intraspecific variation in small-subunit rRNA sequences in GenBank: Why single species may not adequately represent prokaryotic taxa
    • Clayton, R. A., Sutton, G., Hinkle, P. S., Jr, Bult, C. & Fields, C. (1995). Intraspecific variation in small-subunit rRNA sequences in GenBank: why single species may not adequately represent prokaryotic taxa. Int J Syst Bacteriol 45, 595-599.
    • (1995) Int J Syst Bacteriol , vol.45 , pp. 595-599
    • Clayton, R.A.1    Sutton, G.2    Hinkle Jr, P.S.3    Bult, C.4    Fields, C.5
  • 9
    • 0032884296 scopus 로고    scopus 로고
    • Two-liquid-phase bioreactors for enhanced degradation of hydrophobic/toxic compounds
    • Déziel, E., Comeau, Y. & Villemur, R. (1999). Two-liquid-phase bioreactors for enhanced degradation of hydrophobic/toxic compounds. Biodegradation 10, 219-233.
    • (1999) Biodegradation , vol.10 , pp. 219-233
    • Déziel, E.1    Comeau, Y.2    Villemur, R.3
  • 10
    • 0003437265 scopus 로고
    • Polycyclic Aromatic Hydrocarbons Hazards to Fish, Wildlife and Invertebrates: A Synoptic Review
    • 85 1.11, Washington, DC: US Fish and Wildlife Service
    • Eisler, R. (1987). Polycyclic Aromatic Hydrocarbons Hazards to Fish, Wildlife and Invertebrates: a Synoptic Review. Biol Report 85 (1.11). Washington, DC: US Fish and Wildlife Service.
    • (1987) Biol Report
    • Eisler, R.1
  • 11
    • 0030464460 scopus 로고    scopus 로고
    • Galtier, N., Gouy, M. & Gautier, C. (1996). SEAVIEW and PHYLO-WIN, two graphic tools for sequence alignment and molecular phylogeny. Comput Appl Biosci 12, 543-548.
    • Galtier, N., Gouy, M. & Gautier, C. (1996). SEAVIEW and PHYLO-WIN, two graphic tools for sequence alignment and molecular phylogeny. Comput Appl Biosci 12, 543-548.
  • 12
    • 0037244485 scopus 로고    scopus 로고
    • Initial characterization of new bacteria degrading high-molecular-weight polycyclic aromatic hydrocarbons isolated from a 2-year enrichment in a two-liquid-phase culture system
    • Gauthier, E., Déziel, E., Villemur, R., Juteau, P., Lépine, F. & Beaudet, R. (2003). Initial characterization of new bacteria degrading high-molecular-weight polycyclic aromatic hydrocarbons isolated from a 2-year enrichment in a two-liquid-phase culture system. J Appl Microbiol 94, 301-311.
    • (2003) J Appl Microbiol , vol.94 , pp. 301-311
    • Gauthier, E.1    Déziel, E.2    Villemur, R.3    Juteau, P.4    Lépine, F.5    Beaudet, R.6
  • 13
    • 34548185222 scopus 로고    scopus 로고
    • Rheinheimera chironomi sp. nov., isolated from a chironomid (Diptera; Chironomidae) egg mass
    • Halpern, M., Senderovich, Y. & Snir, S. (2007). Rheinheimera chironomi sp. nov., isolated from a chironomid (Diptera; Chironomidae) egg mass. Int J Syst Evol Microbiol 57, 1872-1875.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 1872-1875
    • Halpern, M.1    Senderovich, Y.2    Snir, S.3
  • 14
    • 0030727692 scopus 로고    scopus 로고
    • Utilization of bioremediation processes for the treatment of PAHcontaminated sediments
    • Hughes, J. B., Beckles, D. M., Chandra, S. D. & Ward, C. H. (1997). Utilization of bioremediation processes for the treatment of PAHcontaminated sediments. J Ind Microbiol Biotechnol 18, 152-160.
    • (1997) J Ind Microbiol Biotechnol , vol.18 , pp. 152-160
    • Hughes, J.B.1    Beckles, D.M.2    Chandra, S.D.3    Ward, C.H.4
  • 15
    • 10644226842 scopus 로고    scopus 로고
    • Direct FAME synthesis for rapid total lipid analysis from fish oil and cod liver oil
    • Indarti, E., Majid, M. I. A., Hashim, R. & Chong, A. (2005). Direct FAME synthesis for rapid total lipid analysis from fish oil and cod liver oil. J Food Compost Anal 18, 161-170.
    • (2005) J Food Compost Anal , vol.18 , pp. 161-170
    • Indarti, E.1    Majid, M.I.A.2    Hashim, R.3    Chong, A.4
  • 16
    • 0033884282 scopus 로고    scopus 로고
    • Bioremediation of high molecular weight polycyclic aromatic hydrocarbons: A review of the microbial degradation of benzo[a]pyrene
    • Juhasz, A. L. & Naidu, R. (2000). Bioremediation of high molecular weight polycyclic aromatic hydrocarbons: a review of the microbial degradation of benzo[a]pyrene. Int Biodeterior Biodegrad 45, 57-88.
    • (2000) Int Biodeterior Biodegrad , vol.45 , pp. 57-88
    • Juhasz, A.L.1    Naidu, R.2
  • 17
    • 0001235024 scopus 로고
    • Polynuclear aromatic hydrocarbons
    • Boca Raton, FL: CRC Press
    • Kennish, M. J. (1992). Polynuclear aromatic hydrocarbons. In Ecology of Estuaries: Anthropogenic Effects, pp. 133-182. Boca Raton, FL: CRC Press.
    • (1992) Ecology of Estuaries: Anthropogenic Effects , pp. 133-182
    • Kennish, M.J.1
  • 18
    • 0020054928 scopus 로고
    • Rapid screen for bacteria degrading water-insoluble, solid hydrocarbons on agar plates
    • Kiyohara, H., Nagao, K. & Yana, K. (1982). Rapid screen for bacteria degrading water-insoluble, solid hydrocarbons on agar plates. Appl Environ Microbiol 43, 454-457.
    • (1982) Appl Environ Microbiol , vol.43 , pp. 454-457
    • Kiyohara, H.1    Nagao, K.2    Yana, K.3
  • 20
    • 0344780794 scopus 로고    scopus 로고
    • Patterns of sequence variation in two regions of the 16S rRNA genes multigene family of Escherichia coli
    • Martinez-Murcia, A. J., Anton, A. I. & Rodriguez-Valera, F. (1999). Patterns of sequence variation in two regions of the 16S rRNA genes multigene family of Escherichia coli. Int J Syst Bacteriol 49, 601-610.
    • (1999) Int J Syst Bacteriol , vol.49 , pp. 601-610
    • Martinez-Murcia, A.J.1    Anton, A.I.2    Rodriguez-Valera, F.3
  • 21
    • 35649022179 scopus 로고    scopus 로고
    • Rheinheimera texasensis sp. nov., a halointolerant freshwater oligotroph
    • Merchant, M. M., Welsh, A. K. & McLean, R. J. C. (2007). Rheinheimera texasensis sp. nov., a halointolerant freshwater oligotroph. Int J Syst Evol Microbiol 57, 2376-2380.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2376-2380
    • Merchant, M.M.1    Welsh, A.K.2    McLean, R.J.C.3
  • 22
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 24
    • 0029796310 scopus 로고    scopus 로고
    • Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis
    • Nübel, U., Engelen, B., Felske, A., Snaidr, J., Wieshuber, A., Amann, R. I., Ludwig, W. & Backhaus, H. (1996). Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis. J Bacteriol 178, 5636-5643.
    • (1996) J Bacteriol , vol.178 , pp. 5636-5643
    • Nübel, U.1    Engelen, B.2    Felske, A.3    Snaidr, J.4    Wieshuber, A.5    Amann, R.I.6    Ludwig, W.7    Backhaus, H.8
  • 25
    • 0031978459 scopus 로고    scopus 로고
    • Molecular evolution of Mycoplasma capricolum subsp. capripneumoniae strains, based on polymorphisms in the 16S rRNA genes
    • Pettersson, B., Bölske, G., Thiaucourt, F., Uhlén, M. & Johansson, K. E. (1998). Molecular evolution of Mycoplasma capricolum subsp. capripneumoniae strains, based on polymorphisms in the 16S rRNA genes. J Bacteriol 180, 2350-2358.
    • (1998) J Bacteriol , vol.180 , pp. 2350-2358
    • Pettersson, B.1    Bölske, G.2    Thiaucourt, F.3    Uhlén, M.4    Johansson, K.E.5
  • 26
    • 0028824739 scopus 로고
    • Efficacy of the Ryu nonstaining KOH technique for rapidly determining Gram reactions of food-borne and waterborne bacteria and yeasts
    • Powers, E. M. (1995). Efficacy of the Ryu nonstaining KOH technique for rapidly determining Gram reactions of food-borne and waterborne bacteria and yeasts. Appl Environ Microbiol 61, 3756-3758.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 3756-3758
    • Powers, E.M.1
  • 27
    • 0031969764 scopus 로고    scopus 로고
    • 16S rRNA sequence diversity in Mycobacterium celatum strains caused by presence of two different copies of 16S rRNA gene
    • Reischl, U., Feldmann, K., Naumann, L., Gaugler, B. J., Ninet, B., Hirschel, B. & Elmer, S. (1998). 16S rRNA sequence diversity in Mycobacterium celatum strains caused by presence of two different copies of 16S rRNA gene. J Clin Microbiol 36, 1761-1764.
    • (1998) J Clin Microbiol , vol.36 , pp. 1761-1764
    • Reischl, U.1    Feldmann, K.2    Naumann, L.3    Gaugler, B.J.4    Ninet, B.5    Hirschel, B.6    Elmer, S.7
  • 28
    • 57449090885 scopus 로고    scopus 로고
    • Spatial comparison of total vs. active bacterial populations by coupling genetic fingerprinting and clone library analyses in the NW Mediterranean Sea
    • Rodríguez-Blanco, A., Ghiglione, J. F., Catala, P., Casamayor, E. O. & Lebaron, P. (2009). Spatial comparison of total vs. active bacterial populations by coupling genetic fingerprinting and clone library analyses in the NW Mediterranean Sea. FEMS Microbiol Ecol 67, 30-32.
    • (2009) FEMS Microbiol Ecol , vol.67 , pp. 30-32
    • Rodríguez-Blanco, A.1    Ghiglione, J.F.2    Catala, P.3    Casamayor, E.O.4    Lebaron, P.5
  • 29
    • 0344897050 scopus 로고    scopus 로고
    • Rheinheimera pacifica sp. nov., a novel halotolerant bacterium isolated from deep sea water of the Pacific
    • Romanenko, L. A., Uchino, M., Falsen, E., Zhukova, N. V., Mikhailov, V. V. & Uchimura, T. (2003). Rheinheimera pacifica sp. nov., a novel halotolerant bacterium isolated from deep sea water of the Pacific. Int J Syst Evol Microbiol 53, 1973-1977.
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 1973-1977
    • Romanenko, L.A.1    Uchino, M.2    Falsen, E.3    Zhukova, N.V.4    Mikhailov, V.V.5    Uchimura, T.6
  • 30
    • 55849116350 scopus 로고    scopus 로고
    • Rheinheimera soli sp. nov., a gammaproteobacterium isolated from soil in Korea
    • Ryu, S. H., Chung, B. S., Park, M., Lee, S. S., Lee, S.-S. & Jeon, C. O. (2008). Rheinheimera soli sp. nov., a gammaproteobacterium isolated from soil in Korea. Int J Syst Evol Microbiol 58, 2271-2274.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 2271-2274
    • Ryu, S.H.1    Chung, B.S.2    Park, M.3    Lee, S.S.4    Lee, S.-S.5    Jeon, C.O.6
  • 31
    • 5444269845 scopus 로고    scopus 로고
    • Novosphingobium pentaromativorans sp. nov., a highmolecular-mass polycyclic aromatic hydrocarbon-degrading bacterium isolated from sediment
    • Sohn, J. H., Kwon, K. K., Kang, J. H., Jung, H. B. & Kim, S. J. (2004). Novosphingobium pentaromativorans sp. nov., a highmolecular-mass polycyclic aromatic hydrocarbon-degrading bacterium isolated from sediment. Int J Syst Evol Microbiol 54, 1483-1487.
    • (2004) Int J Syst Evol Microbiol , vol.54 , pp. 1483-1487
    • Sohn, J.H.1    Kwon, K.K.2    Kang, J.H.3    Jung, H.B.4    Kim, S.J.5
  • 32
    • 0021715576 scopus 로고
    • Determination of DNA base composition by reversed-phase high-performance liquid chromatography
    • Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
    • (1984) FEMS Microbiol Lett , vol.25 , pp. 125-128
    • Tamaoka, J.1    Komagata, K.2
  • 33
    • 34547451077 scopus 로고    scopus 로고
    • Rheinheimera aquimaris sp. nov., isolated from seawater of the East Sea in Korea
    • Yoon, J. H., Bae, S. E., Kang, S. J. & Oh, T. K. (2007). Rheinheimera aquimaris sp. nov., isolated from seawater of the East Sea in Korea. Int J Syst Evol Microbiol 57, 1386-1390.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 1386-1390
    • Yoon, J.H.1    Bae, S.E.2    Kang, S.J.3    Oh, T.K.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.