Erratum to: Nuclear Proteome Analysis of Monkey Embryonic Stem Cells During Differentiation (Stem Cell Rev and Rep, 10.1007/s12015-009-9109-6);Nuclear proteome analysis of monkey embryonic stem cells during differentiation

Stem Cell Reviews and Reports

Volumn 6, Issue 1, 2010, Pages 50-61

  Nasrabadi, Davood ^a   Larijani, Mehran Rezaei ^a   Fathi, Ali ^a   Gourabi, Hamid ^a   Dizaj, Ahmad V ^a   Baharvand, Hossein ^a,b   Salekdeh, Ghasem Hosseini ^a,c  

^a ROYAN INSTITUTE FOR REPRODUCTIVE BIOMEDICINE   (Iran)

^b UNIVERSITY OF SCIENCE AND CULTURE   (Iran)

^c Agricultural Biotechnology Research Institute of Iran   (Iran)

Author keywords

Differentiation; Embryonic stem cells; Monkey; Nucleus; Proteomics

Indexed keywords

EID: 77949304086     PISSN: 15508943     EISSN: 15586804     Source Type: Journal    
DOI: 10.1007/s12015-010-9127-4     Document Type: Erratum

References (46)

1. Baharvand, H., Fathi, A., van Hoof, D., & Salekdeh, G. H. (2007). Concise review: trends in stem cell proteomics. Stem Cells, 25, 1888-1903.
2. Gorg, A., Weiss, W., & Dunn, M. J. (2004). Current two-dimensional electrophoresis technology for proteomics. Proteomics, 4, 3665-3685.
3. Elliott, S. T., Crider, D. G., Garnham, C. P., Boheler, K. R., & van Eyk, J. E. (2004). Two-dimensional gel electrophoresis database of murine R1 embryonic stem cells. Proteomics, 4, 3813-3832.
4. Baharvand, H., Hajheidari, M., Kazemi Ashtiani, S., & Salekdeh, G. H. (2006). Proteomic signature of human embryonic stem cells. Proteomics, 6, 3544-3549.
5. Baharvand, H., Fathi, A., Gourabi, H., Mollamohammadi, S., & Salekdeh, G. H. (2008). Identification of mouse embryonic stem cell-associated proteins. Journal of Proteome Research, 7, 412-423.
6. Guo, X., Ying, W., Wan, J., et al. (2001). Proteomic characterization of early-stage differentiation of mouse embryonic stem cells into neural cells induced by all-trans retinoic acid in vitro. Electrophoresis, 22, 3067-3075.
7. Kadota, M., Nishigaki, R., Wang, C. C., et al. (2004). Proteomic signatures and aberrations of mouse embryonic stem cells containing a single human chromosome 21 in neuronal differentiation: an in vitro model of Down syndrome. Neuroscience, 129, 325-335.
8. Barthelery, M., Salli, U., & Vrana, K. E. (2007). Nuclear proteomics and directed differentiation of embryonic stem cells. Stem Cells Development, 16, 905-919.
9. Buhr, N., Carapito, C., Schaeffer, C., Kieffer, E., van Dorsselaer, A., & Viville, S. (2008). Nuclear proteome analysis of undifferentiated mouse embryonic stem and germ cells. Electrophoresis, 29, 2381-2390.
10. Jaishankar, A., Barthelery, M., Freeman, W. M., Salli, U., Ritty, T. M., & Vrana, K. E. (2009). Human embryonic and mesenchymal stem cells express different nuclear proteomes. Stem Cells Development, 18, 793-802.
11. Kurisaki, A., Hamazaki, T. S., Okabayashi, K., et al. (2005). Chromatin-related proteins in pluripotent mouse embryonic stem cells are downregulated after removal of leukemia inhibitory factor. Biochemical and Biophysical Research Communications, 335, 667-675.
12. Suemori, H., Tada, T., Torii, R., et al. (2001). Establishment of embryonic stem cell lines from cynomolgus monkey blastocysts produced by IVF or ICSI. Developmental Dynamics, 222, 273-279.
13. Nasrabadi, D., Rezaei, M., Pirhaji, L., et al. (2009). Proteomic analysis of monkey embryonic stem cell during differentiation. Journal of Proteome Research, 8, 1527-1539.
14. Blum, H., Beier, H., & Gross, H. J. (1987). Improved silver staining of plant proteins, RNA and DNA in polyacrylamide gels. Electrophoresis, 8, 93-99.
15. Neuhoff, V., Arold, N., Taube, D., & Ehrhardt, W. (1988). Improved staining of proteins in polyacrylamide gels including isoelectric focusing gels with clear background at nanogram sensitivity using coomassie brilliant blue G-250 and R-250. Electrophoresis, 9, 255-262.
16. Jensen, L. J., Kuhn, M., Stark, M., et al. (2009). STRING 8-a global view on proteins and their functional interactions in 630 organisms. Nucleic Acids Research, 37, D412-D416.
17. Jónsson, Z. O., Jha, S., Wohlschlegel, J. A., & Dutta, A. (2004). Rvb1p/Rvb2p recruit Arp5p and assemble a functional Ino80 chromatin remodeling complex. Molecular Cell, 16, 465-477.
18. Wood, M. A., McMahon, S. B., & Cole, M. D. (2000). An ATPase/Helicase complex is an essential cofactor for oncogenic transformation by c-Myc. Molecular Cell, 5, 321-330.
19. Zhao, Y., Kwon, S. W., Anselmo, A., Kaur, K., & White, M. A. (2004). Broad spectrum identification of cellular small ubiquitin-related modifier (SUMO) substrate proteins. Journal of Biological Chemistry, 279, 20999-21002.
20. Boyd, J. M., Subramanian, T., Schaeper, U., La Regina, M., Bayley, S., & Chinnadurai, G. (1993). A region in the C-terminus of adenovirus 2/5 E1a protein is required for association with a cellular phosphoprotein and important for the negative modulation of T24-ras mediated transformation, tumorigenesis and metastasis. EMBO Journal, 12, 469-478.
21. Chinnadurai, G. (2002). CtBP, an unconventional transcriptional corepressor in development and oncogenesis. Molecular Cell, 9, 213-224.
22. Shi, Y., Sawada, J., Sui, G., et al. (2003). Coordinated histone modifications mediated by a CtBP co-repressor complex. Nature, 422, 735-738.
23. Zhang, C. L., McKinsey, T. A., Lu, J., & Olson, E. N. (2001). Association of COOH-terminal-binding Protein (CtBP) and MEF2-interacting transcription repressor (MITR) contributes to transcriptional repression of the MEF2 transcription factor. Journal of Biological Chemistry, 276, 35-39.
24. Mori, K., Maeda, Y., Kitaura, H., Taira, T., Iguchi-Ariga, S. M. M., & Ariga, H. (1998). MM-1, a novel c-Myc-associating protein that represses transcriptional activity of c-Myc. Journal of Biological Chemistry, 273, 29794-29800.
25. Fukuda, S., Wu, D. W., Stark, K., & Pelus, L. M. (2002). Cloning and characterization of a proliferation-associated cytokine-inducible protein, CIP29. Biochemical and Biophysical Research Communications, 292, 593-600.
26. Bomsztyk, K., Denisenko, O., & Ostrowski, J. (2004). hnRNP K: one protein multiple processes. BioEssays, 26, 629-638.
27. Bomsztyk, K., van Seuningen, I., Suzuki, H., Denisenko, O., & Ostrowski, J. (1997). Diverse molecular interactions of the hnRNP K protein. FEBS Letters, 403, 113-115.
28. Moumen, A., Masterson, P., O'Connor, M. J., & Jackson, S. P. (2005). hnRNP K: An HDM2 target and transcriptional coactivator of p53 in response to DNA damage. Cell, 123, 1065-1078.
29. Cziepluch, C., Kordes, E., Poirey, R., Grewenig, A., Rommelaere, J., & Jauniaux, J. C. (1998). Identification of a novel cellular TPR-containing protein, SGT, that interacts with the nonstructural protein NS1 of parvovirus H-1. Journal of Virology, 72, 4149-4156.
30. D'Andrea, L. D., & Regan, L. (2003). TPR proteins: the versatile helix. Trends in Biochemical Sciences, 28, 655-662.
31. Wang, H., Shen, H., Wang, Y., et al. (2005). Overexpression of small glutamine-rich TPR-containing protein promotes apoptosis in 7721 cells. FEBS Letters, 579, 1279-1284.
32. Perillo, N. L., Marcus, M. E., & Baum, L. G. (1998). Galectins: versatile modulators of cell adhesion, cell proliferation, and cell death. Journal of Molecular Medicine, 76, 402-412.
33. Sakaguchi, M., Shingo, T., Shimazaki, T., et al. (2006). A carbohydrate-binding protein, Galectin-1, promotes proliferation of adult neural stem cells. Proceedings of the National Academy of Sciences of the United States of America, 103, 7112-7117.
34. Cowling, V. H., & Cole, M. D. (2006). Mechanism of transcriptional activation by the Myc oncoproteins. Seminars in Cancer Biology, 16, 242-252.
35. Dang, C. V., O'Donnell, K. A., Zeller, K. I., Nguyen, T., Osthus, R. C., & Li, F. (2006). The c-Myc target gene network. Seminars in Cancer Biology, 16, 253-264.
36. Knoepfler, P. S. (2007). Myc goes global: new tricks for an old oncogene. Cancer Research, 67, 5061-5063.
37. Meyer, N., Kim, S. S., & Penn, L. Z. (2006). The Oscar-worthy role of Myc in apoptosis. Seminars in Cancer Biology, 16, 275-287.
38. Li, L. H., Nerlov, C., Prendergast, G., MacGregor, D., & Ziff, E. B. (1994). c-Myc represses transcription in vivo by a novel mechanism dependent on the initiator element and Myc box II. EMBO Journal, 13, 4070-4079.
39. Satou, A., Taira, T., Iguchi-Ariga, S. M. M., & Ariga, H. (2001). A novel transrepression pathway of c-Myc recruitment of a transcriptional corepressor complex to c-Myc BY MM-1, A c-Myc-binding protein. Journal of Biological Chemistry, 276, 46562-46567.
40. Tomonaga, T., & Levens, D. (1995). Heterogeneous nuclear ribonucleoprotein K is a DNA-binding transactivator. Journal of Biological Chemistry, 270, 4875-4881.
41. Wang, B. B., Lu, R., Wang, W. C., & Jin, Y. (2006). Inducible and reversible suppression of Npm1 gene expression using stably integrated small interfering RNA vector in mouse embryonic stem cells. Biochemical and Biophysical Research Communications, 347, 1129-1137.
42. Grisendi, S., Mecucci, C., Falini, B., & Pandolfi, P. P. (2006). Nucleophosmin and cancer. Nature Reviews Cancer, 6, 493-505.
43. Li, Z., Boone, D., & Hann, S. R. (2008). Nucleophosmin interacts directly with c-Myc and controls c-Myc-induced hyperproliferation and transformation. Proceedings of the National Academy of Sciences of the United States of America, 105, 18794-18799.
44. Korgaonkar, C., Hagen, J., Tompkins, V., et al. (2005). Nucleophosmin (B23) targets ARF to nucleoli and inhibits its function. Molecular and Cellular Biology, 25, 1258-1271.
45. Baharvand, H., Hajheidari, M., Ashtiani, S. K., & Salekdeh, G. H. (2006). Proteomic signature of human embryonic stem cells. Proteomics, 6, 3544-3549.
46. Barthelery, M., Salli, U., & Vrana, K. E. (2008). Enhanced nuclear proteomics. Proteomics, 8, 1832-1838.