-
1
-
-
1642326634
-
Fungal molecular diagnostics: A mini review
-
Atkins, S. D., and I. M. Clark. 2004. Fungal molecular diagnostics: a mini review. J. Appl. Genet. 1:3-15.
-
(2004)
J. Appl. Genet
, vol.1
, pp. 3-15
-
-
Atkins, S.D.1
Clark, I.M.2
-
2
-
-
65249137594
-
Sequence based identification of Aspergillus, Fusarium, and Mucorlaes species in the clinical mycology laboratory: Where should we go from here?
-
Balajee, S. A., A. M. Borman, M. E. Brandt, J. Cano, M. Cuenca-Estrella, E. Dannaoui, J. Guarro, G. Haase, C. C. Kibbler, W. Meyer, K. O'Donnell, A. Petti, J. L. Rodriguez, D. Sutton, A. Velegraki, and B. L. Wickes. 2009. Sequence based identification of Aspergillus, Fusarium, and Mucorlaes species in the clinical mycology laboratory: where should we go from here? J. Clin. Microbiol. 47:877-884.
-
(2009)
J. Clin. Microbiol
, vol.47
, pp. 877-884
-
-
Balajee, S.A.1
Borman, A.M.2
Brandt, M.E.3
Cano, J.4
Cuenca-Estrella, M.5
Dannaoui, E.6
Guarro, J.7
Haase, G.8
Kibbler, C.C.9
Meyer, W.10
O'Donnell, K.11
Petti, A.12
Rodriguez, J.L.13
Sutton, D.14
Velegraki, A.15
Wickes, B.L.16
-
3
-
-
38549113564
-
Aspergillus species identification in the clinical setting
-
Balajee, S. A. 2007. Aspergillus species identification in the clinical setting. Stud. Mycol. 1:39-46.
-
(2007)
Stud. Mycol
, vol.1
, pp. 39-46
-
-
Balajee, S.A.1
-
4
-
-
34548283182
-
DNA and the classical way: Identification of medically important molds in the 21st century
-
Balajee, S. A., L. Sigler, and M. E. Brandt. 2007. DNA and the classical way: identification of medically important molds in the 21st century. J. Med. Mycol. 45:475-490.
-
(2007)
J. Med. Mycol
, vol.45
, pp. 475-490
-
-
Balajee, S.A.1
Sigler, L.2
Brandt, M.E.3
-
5
-
-
84881085358
-
Preserving accuracy in GenBank
-
Bidartondo, M. I. 2008. Preserving accuracy in GenBank. Science 319:1616.
-
(2008)
Science
, vol.319
, pp. 1616
-
-
Bidartondo, M.I.1
-
6
-
-
41949135204
-
Molecular identification of pathogenic fungi
-
Borman, A. M., C. J. Linton, S. J. Miles, and E. M. Johnson. 2008. Molecular identification of pathogenic fungi. J. Antimicrob. Chemother. 61:7-12.
-
(2008)
J. Antimicrob. Chemother
, vol.61
, pp. 7-12
-
-
Borman, A.M.1
Linton, C.J.2
Miles, S.J.3
Johnson, E.M.4
-
8
-
-
0034130743
-
Identification of medically important yeasts using PCR-based detection of DNA sequence polymorphisms in the internal transcribed spacer 2 region of the rRNA genes
-
Chen, Y. C., J. D. Eisner, M. M. Kattar, S. L. Rassoulian-Barrett, K. Lafe, U. Bui, A. P. Limaye, and B. T. Cookson. 2000. Identification of medically important yeasts using PCR-based detection of DNA sequence polymorphisms in the internal transcribed spacer 2 region of the rRNA genes. J. Clin. Microbiol. 38:2302-2310.
-
(2000)
J. Clin. Microbiol
, vol.38
, pp. 2302-2310
-
-
Chen, Y.C.1
Eisner, J.D.2
Kattar, M.M.3
Rassoulian-Barrett, S.L.4
Lafe, K.5
Bui, U.6
Limaye, A.P.7
Cookson, B.T.8
-
9
-
-
0034760526
-
Polymorphic internal transcribed spacer region 1 DNA sequences identify medically important yeasts
-
Chen, Y. C., J. D. Eisner, M. M. Kattar, S. L. Rassoulian-Barrett, K. Lafe, U. Bui, A. P. Limaye, and B. T. Cookson. 2001. Polymorphic internal transcribed spacer region 1 DNA sequences identify medically important yeasts. J. Clin. Microbiol. 39:4042-4051.
-
(2001)
J. Clin. Microbiol
, vol.39
, pp. 4042-4051
-
-
Chen, Y.C.1
Eisner, J.D.2
Kattar, M.M.3
Rassoulian-Barrett, S.L.4
Lafe, K.5
Bui, U.6
Limaye, A.P.7
Cookson, B.T.8
-
10
-
-
34548599650
-
Identification of moulds in the diagnostic laboratory-an algorithm implementing molecular and phenotypic methods
-
Cirado, D. E., G. Schar, M. Altwegg, E. C. Bottger, and P. P. Bosshard. 2007. Identification of moulds in the diagnostic laboratory-an algorithm implementing molecular and phenotypic methods. Diagn. Microbiol. Infect. Dis. 59:49-60.
-
(2007)
Diagn. Microbiol. Infect. Dis
, vol.59
, pp. 49-60
-
-
Cirado, D.E.1
Schar, G.2
Altwegg, M.3
Bottger, E.C.4
Bosshard, P.P.5
-
11
-
-
77749304092
-
-
Clinical and Laboratory Standards Institute. 2008. Interpretive criteria for identification of bacteria and fungi by DNA sequencing; approved guideline. CLSI MM18-A. Clinical and Laboratory Standards Institute, Wayne, PA.
-
Clinical and Laboratory Standards Institute. 2008. Interpretive criteria for identification of bacteria and fungi by DNA sequencing; approved guideline. CLSI MM18-A. Clinical and Laboratory Standards Institute, Wayne, PA.
-
-
-
-
12
-
-
34347325201
-
Basidiomycetous fungal Inonotus tropicalis sacral osteomyelitis in X-linked chronic granulomatous disease
-
Davis, C. M., L. M. Noroski, M. K. Dishop, D. A. Sutton, R. M. Braverman, M. E. Paul, and H. M. Rosenblatt. 2007. Basidiomycetous fungal Inonotus tropicalis sacral osteomyelitis in X-linked chronic granulomatous disease. Pediatr. Infect. Dis. J. 26:655-656.
-
(2007)
Pediatr. Infect. Dis. J
, vol.26
, pp. 655-656
-
-
Davis, C.M.1
Noroski, L.M.2
Dishop, M.K.3
Sutton, D.A.4
Braverman, R.M.5
Paul, M.E.6
Rosenblatt, H.M.7
-
13
-
-
0036462582
-
Recent progress in the diagnosis of fungal infections in the immunocompromised host
-
Erjavec, Z., and P. E. Verweij. 2002. Recent progress in the diagnosis of fungal infections in the immunocompromised host. Drug Resist. Updat. 5:3-10.
-
(2002)
Drug Resist. Updat
, vol.5
, pp. 3-10
-
-
Erjavec, Z.1
Verweij, P.E.2
-
14
-
-
58849116014
-
Physiological and molecular characterization of atypical isolates of Malassezia furfur
-
Gonzalez, A., R. Sierra, R. E. Cardenas, A. Grajales, S. Restrepo, M. C. Cepero de Garcia, and A. Celis. 2009. Physiological and molecular characterization of atypical isolates of Malassezia furfur. J. Clin. Microbiol. 47:48-53.
-
(2009)
J. Clin. Microbiol
, vol.47
, pp. 48-53
-
-
Gonzalez, A.1
Sierra, R.2
Cardenas, R.E.3
Grajales, A.4
Restrepo, S.5
Cepero de Garcia, M.C.6
Celis, A.7
-
15
-
-
0035139563
-
In vitro activities of approved and investigational antifungal agents against 44 clinical isolates of basidiomycetous fungi
-
Gonzalez, G. M., D. A. Sutton, E. Thompson, E. Tijerina, and M. G. Rinaldi. 2001. In vitro activities of approved and investigational antifungal agents against 44 clinical isolates of basidiomycetous fungi. Antimicrob. Agents Chemother. 45:633-635.
-
(2001)
Antimicrob. Agents Chemother
, vol.45
, pp. 633-635
-
-
Gonzalez, G.M.1
Sutton, D.A.2
Thompson, E.3
Tijerina, E.4
Rinaldi, M.G.5
-
16
-
-
1242292921
-
Diagnostic PCR: Making internal amplification control mandatory
-
Hoorfar, J., N. Cook, B. Malorny, M. Wagner, D. De Medici, A. Abdulmawjood, and P. Fach. 2004. Diagnostic PCR: making internal amplification control mandatory. Lett. Appl. Microbiol. 38:79-80.
-
(2004)
Lett. Appl. Microbiol
, vol.38
, pp. 79-80
-
-
Hoorfar, J.1
Cook, N.2
Malorny, B.3
Wagner, M.4
De Medici, D.5
Abdulmawjood, A.6
Fach, P.7
-
17
-
-
0036176250
-
Utilization of the internal transcribed spacer regions as molecular targets to detect and identify human fungal pathogens
-
Iwen, P. C., S. H. Hinrichs, and M. E. Rupp. 2002. Utilization of the internal transcribed spacer regions as molecular targets to detect and identify human fungal pathogens. J. Med. Mycol. 40:87-109.
-
(2002)
J. Med. Mycol
, vol.40
, pp. 87-109
-
-
Iwen, P.C.1
Hinrichs, S.H.2
Rupp, M.E.3
-
18
-
-
34548696115
-
16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory: Pluses, perils, and pitfalls
-
Janda, J. M., and S. L. Abbott. 2007. 16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory: pluses, perils, and pitfalls. J. Clin. Microbiol. 45:2761-2764.
-
(2007)
J. Clin. Microbiol
, vol.45
, pp. 2761-2764
-
-
Janda, J.M.1
Abbott, S.L.2
-
19
-
-
0030907763
-
Identification of clinically important ascomycetous yeasts based on nucleotide divergence in the 5′ end of the large-subunit (26S) ribosomal DNA gene
-
Kurtzman, C. P., and C. J. Robnett. 1997. Identification of clinically important ascomycetous yeasts based on nucleotide divergence in the 5′ end of the large-subunit (26S) ribosomal DNA gene. J. Clin. Microbiol. 35:1216-1223.
-
(1997)
J. Clin. Microbiol
, vol.35
, pp. 1216-1223
-
-
Kurtzman, C.P.1
Robnett, C.J.2
-
20
-
-
0037443858
-
The changing epidemiology of cryptococcosis: An update from population-based active surveillance in 2 large metropolitan areas, 1992-2000
-
Mirza, S. A., M. Phelan, D. Rimland, E. Graviss, R. Hamill, M. E. Brandt, T. Gardner, M. Sattah, G. Ponce de Leon, W. Baughman, and R. A. Hajjeh. 2003. The changing epidemiology of cryptococcosis: an update from population-based active surveillance in 2 large metropolitan areas, 1992-2000. Clin. Infect. Dis. 36:789-794.
-
(2003)
Clin. Infect. Dis
, vol.36
, pp. 789-794
-
-
Mirza, S.A.1
Phelan, M.2
Rimland, D.3
Graviss, E.4
Hamill, R.5
Brandt, M.E.6
Gardner, T.7
Sattah, M.8
Ponce de Leon, G.9
Baughman, W.10
Hajjeh, R.A.11
-
21
-
-
0026681520
-
Impact of the changing epidemiology of fungal infections in the 1990s
-
Pfaller, M., and R. Wenzel. 1992. Impact of the changing epidemiology of fungal infections in the 1990s. Eur. J. Clin. Microbiol. Infect. Dis. 11:287-291.
-
(1992)
Eur. J. Clin. Microbiol. Infect. Dis
, vol.11
, pp. 287-291
-
-
Pfaller, M.1
Wenzel, R.2
-
22
-
-
5444272819
-
Rare and emerging opportunistic fungal pathogens: Concern for resistance beyond Candida albicans and Aspergillus fumigatus
-
Pfaller, M. A., and D. J. Diekema. 2004. Rare and emerging opportunistic fungal pathogens: concern for resistance beyond Candida albicans and Aspergillus fumigatus. J. Clin. Microbiol. 42:4419-4431.
-
(2004)
J. Clin. Microbiol
, vol.42
, pp. 4419-4431
-
-
Pfaller, M.A.1
Diekema, D.J.2
-
23
-
-
33847043480
-
Discovering potential pathogens among fungi identified as nonsporulating molds
-
Pounder, J. I., K. E. Simmon, C. A. Barton, S. L. Hohmann, M. E. Brandt, and C. A. Petti. 2007. Discovering potential pathogens among fungi identified as nonsporulating molds. J. Clin. Microbiol. 45:568-571.
-
(2007)
J. Clin. Microbiol
, vol.45
, pp. 568-571
-
-
Pounder, J.I.1
Simmon, K.E.2
Barton, C.A.3
Hohmann, S.L.4
Brandt, M.E.5
Petti, C.A.6
-
24
-
-
22144457094
-
Multilocus DNA sequence comparisons rapidly identify pathogenic molds
-
Rakeman, J. L., U. Bui, K. LaFe, Y. Chen, R. J. Honeycutt, and B. T. Cookson. 2005. Multilocus DNA sequence comparisons rapidly identify pathogenic molds. J. Clin. Microbiol. 43:3324-3333.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 3324-3333
-
-
Rakeman, J.L.1
Bui, U.2
LaFe, K.3
Chen, Y.4
Honeycutt, R.J.5
Cookson, B.T.6
-
25
-
-
0020143839
-
Use of potato flakes agar in clinical mycology
-
Rinaldi, M. G. 1982. Use of potato flakes agar in clinical mycology. J. Clin. Microbiol. 15:1159-1160.
-
(1982)
J. Clin. Microbiol
, vol.15
, pp. 1159-1160
-
-
Rinaldi, M.G.1
-
26
-
-
34247099393
-
Do clinical features allow for accurate prediction of fungal pathogenesis in bloodstream infections? Potential implications of the increasing prevalence of non-albicans candidemia
-
Shorr, A. F., R. Lazarus, J. H. Sherner, W. L. Jackson, M. Morrel, V. J. Frasier, and M. H. Kollef. 2007. Do clinical features allow for accurate prediction of fungal pathogenesis in bloodstream infections? Potential implications of the increasing prevalence of non-albicans candidemia. J. Soc. Crit. Care Med. 35:1077-1083.
-
(2007)
J. Soc. Crit. Care Med
, vol.35
, pp. 1077-1083
-
-
Shorr, A.F.1
Lazarus, R.2
Sherner, J.H.3
Jackson, W.L.4
Morrel, M.5
Frasier, V.J.6
Kollef, M.H.7
-
27
-
-
0001776628
-
Characterizing and conserving diversity of filamentous basidiomycetes from human sources
-
Sigler, L., and S. L. Abbott. 1997. Characterizing and conserving diversity of filamentous basidiomycetes from human sources. Microb. Cult. Collect. 13:21-27.
-
(1997)
Microb. Cult. Collect
, vol.13
, pp. 21-27
-
-
Sigler, L.1
Abbott, S.L.2
-
28
-
-
0346024266
-
Status of medical mycology education
-
Steinbach, W. J., T. G. Mitchell, W. A. Schell, A. Espinel-Ingroff, R. F. Coico, T. J. Walsh, and J. R. Perfect. 2003. Status of medical mycology education J. Med. Mycol. 41:457-467.
-
(2003)
J. Med. Mycol
, vol.41
, pp. 457-467
-
-
Steinbach, W.J.1
Mitchell, T.G.2
Schell, W.A.3
Espinel-Ingroff, A.4
Coico, R.F.5
Walsh, T.J.6
Perfect, J.R.7
-
29
-
-
0036176757
-
Diagnosis of fungal infections: Current status
-
Stevens, D. A. 2002. Diagnosis of fungal infections: current status J. Antimicrob. Chemother. 49:11-19.
-
(2002)
J. Antimicrob. Chemother
, vol.49
, pp. 11-19
-
-
Stevens, D.A.1
-
30
-
-
0027531783
-
The benomyl test as a fundamental diagnostic method for medical mycology
-
Summerbell, R. C. 1993. The benomyl test as a fundamental diagnostic method for medical mycology. J. Clin. Microbiol. 31:572-577.
-
(1993)
J. Clin. Microbiol
, vol.31
, pp. 572-577
-
-
Summerbell, R.C.1
-
31
-
-
13844253619
-
Identification and first report of Inonotus (Phellinus) tropicalis as an etiologic agent in a patient with chronic granulomatous disease
-
Sutton, D. A., E. H. Thompson, M. G. Rinaldi, P. C. Iwen, K. K. Nakasone, H. S. Jung, H. M. Rosenblatt, and M. E. Paul. 2005. Identification and first report of Inonotus (Phellinus) tropicalis as an etiologic agent in a patient with chronic granulomatous disease. J. Clin. Microbiol. 43:982-987.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 982-987
-
-
Sutton, D.A.1
Thompson, E.H.2
Rinaldi, M.G.3
Iwen, P.C.4
Nakasone, K.K.5
Jung, H.S.6
Rosenblatt, H.M.7
Paul, M.E.8
-
32
-
-
0000432452
-
Amplification and sequencing of fungal ribosomal RNA genes for phylogenetics
-
Academic Press, New York, NY
-
White, T. J., T. D. Bruns, S. B. Lee, and J. W. Taylor. 1990. Amplification and sequencing of fungal ribosomal RNA genes for phylogenetics, p. 315-322. In PCR protocols and applications: a laboratory manual. Academic Press, New York, NY.
-
(1990)
PCR protocols and applications: A laboratory manual
, pp. 315-322
-
-
White, T.J.1
Bruns, T.D.2
Lee, S.B.3
Taylor, J.W.4
|