메뉴 건너뛰기




Volumn 9, Issue 3, 2010, Pages 449-459

Population polymorphism of nuclear mitochondrial dna insertions reveals widespread diploidy associated with loss of heterozygosity in debaryomyces hansenii

Author keywords

[No Author keywords available]

Indexed keywords

FUNGAL DNA; MITOCHONDRIAL DNA;

EID: 77649309911     PISSN: 15359778     EISSN: None     Source Type: Journal    
DOI: 10.1128/EC.00263-09     Document Type: Article
Times cited : (22)

References (45)
  • 1
    • 0002045462 scopus 로고
    • Contribution à l'étude de l'origine des levures du fromage de Camembert
    • Baroiller, C., and J. L. Schmidt. 1990. Contribution à l'étude de l'origine des levures du fromage de Camembert. Lait 70:67-84.
    • (1990) Lait , vol.70 , pp. 67-84
    • Baroiller, C.1    Schmidt, J.L.2
  • 2
    • 34547657301 scopus 로고    scopus 로고
    • Analysis of nuclear copies of mitochondrial sequences in honeybee (Apis mellifera) genome
    • Behura, S. K. 2007. Analysis of nuclear copies of mitochondrial sequences in honeybee (Apis mellifera) genome. Mol. Biol. Evol. 24:1492-1505.
    • (2007) Mol. Biol. Evol , vol.24 , pp. 1492-1505
    • Behura, S.K.1
  • 3
    • 0043197403 scopus 로고    scopus 로고
    • Rates of DNA duplication and mitochondrial DNA insertion in the human genome
    • Bensasson, D., M. W. Feldman, and D. A. Petrov. 2003. Rates of DNA duplication and mitochondrial DNA insertion in the human genome. J. Mol. Evol. 57:343-354.
    • (2003) J. Mol. Evol , vol.57 , pp. 343-354
    • Bensasson, D.1    Feldman, M.W.2    Petrov, D.A.3
  • 5
    • 0034562395 scopus 로고    scopus 로고
    • DNA probes specific for the yeast species Debaryomyces hansenii: Useful tools for rapid identification
    • Corredor, M., A. M. Davila, C. Gaillardin, and S. Casaregola. 2000. DNA probes specific for the yeast species Debaryomyces hansenii: useful tools for rapid identification. FEMS Microbiol. Lett. 193:171-177.
    • (2000) Fems Microbiol. Lett , vol.193 , pp. 171-177
    • Corredor, M.1    Davila, A.M.2    Gaillardin, C.3    Casaregola, S.4
  • 7
    • 59049091695 scopus 로고    scopus 로고
    • Loss of heterozygosity in commensal isolates of the asexual diploid yeast Candida albicans
    • Diogo, D., C. Bouchier, C. d'Enfert, and M. E. Bougnoux. 2009. Loss of heterozygosity in commensal isolates of the asexual diploid yeast Candida albicans. Fungal Genet. Biol. 46:159-168.
    • (2009) Fungal Genet. Biol , vol.46 , pp. 159-168
    • Diogo, D.1    Bouchier, C.2    D'enfert, C.3    Bougnoux, M.E.4
  • 9
    • 47749142093 scopus 로고    scopus 로고
    • Mutations in the multi-drug resistance regulator MRR1, followed by loss of heterozygosity, are the main cause of MDR1 overexpression in fluconazole-resistant Candida albicans strains
    • Dunkel, N., J. Blass, P. D. Rogers, and J. Morschhauser. 2008. Mutations in the multi-drug resistance regulator MRR1, followed by loss of heterozygosity, are the main cause of MDR1 overexpression in fluconazole-resistant Candida albicans strains. Mol. Microbiol. 69:827-840.
    • (2008) Mol. Microbiol , vol.69 , pp. 827-840
    • Dunkel, N.1    Blass, J.2    Rogers, P.D.3    Morschhauser, J.4
  • 11
    • 13744251715 scopus 로고    scopus 로고
    • Demonstration of loss of heterozygosity by single-nucleotide polymorphism microarray analysis and alterations in strain morphology in Candida albicans strains during infection
    • Forche, A., G. May, and P. T. Magee. 2005. Demonstration of loss of heterozygosity by single-nucleotide polymorphism microarray analysis and alterations in strain morphology in Candida albicans strains during infection. Eukaryot. Cell 4:156-165.
    • (2005) Eukaryot. Cell , vol.4 , pp. 156-165
    • Forche, A.1    May, G.2    Magee, P.T.3
  • 12
    • 70349671762 scopus 로고    scopus 로고
    • Evolutionary capture of viral and plasmid DNA by yeast nuclear chromosomes
    • Frank, A. C., and K. H. Wolfe. 2009. Evolutionary capture of viral and plasmid DNA by yeast nuclear chromosomes. Eukaryot. Cell 8:1521-1531.
    • (2009) Eukaryot. Cell , vol.8 , pp. 1521-1531
    • Frank, A.C.1    Wolfe, K.H.2
  • 13
    • 47349123710 scopus 로고    scopus 로고
    • Recent allopolyploid origin of Zygosaccharomyces rouxii strain ATCC 42981
    • Gordon, J. L., and K. H. Wolfe. 2008. Recent allopolyploid origin of Zygosaccharomyces rouxii strain ATCC 42981. Yeast 25:449-456.
    • (2008) Yeast , vol.25 , pp. 449-456
    • Gordon, J.L.1    Wolfe, K.H.2
  • 14
    • 58049200838 scopus 로고    scopus 로고
    • Polyphasic re-examination of Debaryomyces hansenii strains and reinstate- ment of D. hansenii, D. fabryi and D. subglobosus
    • Groenewald, N., H.-M. Daniel, V. Robert, G. A. Poot, and M. T. Smith. 2008. Polyphasic re-examination of Debaryomyces hansenii strains and reinstate- ment of D. hansenii, D. fabryi and D. subglobosus. Persoonia 21:17-27.
    • (2008) Persoonia , vol.21 , pp. 17-27
    • Groenewald, N.1    Daniel, H.-M.2    Robert, V.3    Poot, G.A.4    Smith, M.T.5
  • 15
    • 0027212273 scopus 로고
    • Osmophilic linear plasmids from the salt-tolerant yeast Debaryomyces hansenii
    • Gunge, N., K. Fukuda, S. Morikawa, K. Murakami, M. Takeda, and A. Miwa. 1993. Osmophilic linear plasmids from the salt-tolerant yeast Debaryomyces hansenii. Curr. Genet. 23:443-449.
    • (1993) Curr. Genet , vol.23 , pp. 443-449
    • Gunge, N.1    Fukuda, K.2    Morikawa, S.3    Murakami, K.4    Takeda, M.5    Miwa, A.6
  • 16
    • 70349895392 scopus 로고    scopus 로고
    • Mitochondrial insertions into primate nuclear genomes suggest the use of numts as a tool for phylogeny
    • Hazkani-Covo, E. 2009. Mitochondrial insertions into primate nuclear genomes suggest the use of numts as a tool for phylogeny. Mol. Biol. Evol. 26:2175-2179.
    • (2009) Mol. Biol. Evol , vol.26 , pp. 2175-2179
    • Hazkani-Covo, E.1
  • 17
    • 0023481280 scopus 로고
    • A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli
    • Hoffman, C. S., and F. Winston. 1987. A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli. Gene 57:267-272.
    • (1987) Gene , vol.57 , pp. 267-272
    • Hoffman, C.S.1    Winston, F.2
  • 18
    • 50249126564 scopus 로고    scopus 로고
    • Safety assessment of dairy microorganisms: The hemiascomycetous yeasts
    • Jacques, N., and S. Casaregola. 2008. Safety assessment of dairy microorganisms: the hemiascomycetous yeasts. Int. J. Food Microbiol. 126:321-326.
    • (2008) Int. J. Food Microbiol , vol.126 , pp. 321-326
    • Jacques, N.1    Casaregola, S.2
  • 19
    • 67649817469 scopus 로고    scopus 로고
    • Delimitation of the species of the Debaryomyces hansenii complex by intron sequence analysis
    • Jacques, N., S. Mallet, and S. Casaregola. 2009. Delimitation of the species of the Debaryomyces hansenii complex by intron sequence analysis. Int. J. Syst. Evol. Microbiol. 59:1242-1251.
    • (2009) Int. J. Syst. Evol. Microbiol , vol.59 , pp. 1242-1251
    • Jacques, N.1    Mallet, S.2    Casaregola, S.3
  • 20
    • 17644372311 scopus 로고    scopus 로고
    • Molecular evidence for the existence of natural hybrids in the genus Zygosaccharomyces
    • James, S. A., C. J. Bond, M. Stratford, and I. N. Roberts. 2005. Molecular evidence for the existence of natural hybrids in the genus Zygosaccharomyces. FEMS Yeast Res. 5:747-755.
    • (2005) Fems Yeast Res , vol.5 , pp. 747-755
    • James, S.A.1    Bond, C.J.2    Stratford, M.3    Roberts, I.N.4
  • 21
    • 63849198290 scopus 로고    scopus 로고
    • Repetitive sequence variation and dynamics in the ribosomal DNA array of Saccharomyces cerevisiae as revealed by whole-genome resequencing
    • James, S. A., M. J. O'Kelly, D. M. Carter, R. P. Davey, A. van Oudenaarden, and I. N. Roberts. 2009. Repetitive sequence variation and dynamics in the ribosomal DNA array of Saccharomyces cerevisiae as revealed by whole-genome resequencing. Genome Res. 19:626-635.
    • (2009) Genome Res , vol.19 , pp. 626-635
    • James, S.A.1    O'Kelly, M.J.2    Carter, D.M.3    Davey, R.P.4    van Oudenaarden, A.5    Roberts, I.N.6
  • 22
    • 0027439896 scopus 로고
    • Kluyveromyces bacillisporus sp. nov., a yeast from Emory oak exudate
    • Lachance, M. A., H. J. Phaff, and W. T. Starmer. 1993. Kluyveromyces bacillisporus sp. nov., a yeast from Emory oak exudate. Int. J. Syst. Bacteriol. 43:115-119.
    • (1993) Int. J. Syst. Bacteriol , vol.43 , pp. 115-119
    • Lachance, M.A.1    Phaff, H.J.2    Starmer, W.T.3
  • 24
    • 40849134474 scopus 로고    scopus 로고
    • Mitochondrial DNA transfer to the nucleus generates extensive insertion site variation in maize
    • Lough, A. N., L. M. Roark, A. Kato, T. S. Ream, J. C. Lamb, J. A. Birchler, and K. J. Newton. 2008. Mitochondrial DNA transfer to the nucleus generates extensive insertion site variation in maize. Genetics 178:47-55.
    • (2008) Genetics , vol.178 , pp. 47-55
    • Lough, A.N.1    Roark, L.M.2    Kato, A.3    Ream, T.S.4    Lamb, J.C.5    Birchler, J.A.6    Newton, K.J.7
  • 25
    • 0002493742 scopus 로고
    • Contribution à l'étude de la flore levure de quelques grands types de fromages de chèvre
    • Nahabieh, F., and J. L. Schmidt. 1990. Contribution à l'étude de la flore levure de quelques grands types de fromages de chèvre. Lait 70:325-343.
    • (1990) Lait , vol.70 , pp. 325-343
    • Nahabieh, F.1    Schmidt, J.L.2
  • 26
    • 0027252075 scopus 로고
    • Chromosomal polymorphism of the yeast Yarrowia lipolytica and related species: Electrophoretic karyotyping and hybridization with cloned genes
    • Naumova, E., G. Naumov, P. Fournier, H. V. Nguyen, and C. Gaillardin. 1993. Chromosomal polymorphism of the yeast Yarrowia lipolytica and related species: electrophoretic karyotyping and hybridization with cloned genes. Curr. Genet. 23:450-454.
    • (1993) Curr. Genet , vol.23 , pp. 450-454
    • Naumova, E.1    Naumov, G.2    Fournier, P.3    Nguyen, H.V.4    Gaillardin, C.5
  • 27
    • 36549008558 scopus 로고    scopus 로고
    • Nuclear insertions of organellar DNA can create novel patches of functional exon sequences
    • Noutsos, C., T. Kleine, U. Armbruster, G. DalCorso, and D. Leister. 2007. Nuclear insertions of organellar DNA can create novel patches of functional exon sequences. Trends Genet. 23:597-601.
    • (2007) Trends Genet , vol.23 , pp. 597-601
    • Noutsos, C.1    Kleine, T.2    Armbruster, U.3    Dalcorso, G.4    Leister, D.5
  • 28
    • 3042763344 scopus 로고    scopus 로고
    • Genetic diversity of the species Debaryomyces hansenii and the use of chromosome polymorphism for typing of strains isolated from surface-ripened cheeses
    • Petersen, K. M., and L. Jespersen. 2004. Genetic diversity of the species Debaryomyces hansenii and the use of chromosome polymorphism for typing of strains isolated from surface-ripened cheeses. J. Appl. Microbiol. 97:205-213.
    • (2004) J. Appl. Microbiol , vol.97 , pp. 205-213
    • Petersen, K.M.1    Jespersen, L.2
  • 29
    • 33847663742 scopus 로고    scopus 로고
    • Unusual origin of a nuclear pseudogene in the Italian wall lizard: Intergenomic and interspecific transfer of a large section of the mitochondrial genome in the genus Podarcis (Lacertidae)
    • Podnar, M., E. Haring, W. Pinsker, and W. Mayer. 2007. Unusual origin of a nuclear pseudogene in the Italian wall lizard: intergenomic and interspecific transfer of a large section of the mitochondrial genome in the genus Podarcis (Lacertidae). J. Mol. Evol. 64:308-320.
    • (2007) J. Mol. Evol , vol.64 , pp. 308-320
    • Podnar, M.1    Haring, E.2    Pinsker, W.3    Mayer, W.4
  • 30
    • 61449235344 scopus 로고    scopus 로고
    • The complex and dynamic genomes of industrial yeasts
    • Querol, A., and U. Bond. 2009. The complex and dynamic genomes of industrial yeasts. FEMS Microbiol. Lett. 293:1-10.
    • (2009) Fems Microbiol. Lett , vol.293 , pp. 1-10
    • Querol, A.1    Bond, U.2
  • 31
    • 67349234131 scopus 로고    scopus 로고
    • Mechanistic plasticity of sexual reproduction and meiosis in the Candida pathogenic species complex
    • Reedy, J. L., A. M. Floyd, and J. Heitman. 2009. Mechanistic plasticity of sexual reproduction and meiosis in the Candida pathogenic species complex. Curr. Biol. 19:891-899.
    • (2009) Curr. Biol , vol.19 , pp. 891-899
    • Reedy, J.L.1    Floyd, A.M.2    Heitman, J.3
  • 32
    • 0033523903 scopus 로고    scopus 로고
    • Mitochondrial DNA repairs double-strand breaks in yeast chromosomes
    • Ricchetti, M., C. Fairhead, and B. Dujon. 1999. Mitochondrial DNA repairs double-strand breaks in yeast chromosomes. Nature 402:96-100.
    • (1999) Nature , vol.402 , pp. 96-100
    • Ricchetti, M.1    Fairhead, C.2    Dujon, B.3
  • 33
    • 19344368527 scopus 로고    scopus 로고
    • Continued colonization of the human genome by mitochondrial DNA
    • Ricchetti, M., F. Tekaia, and B. Dujon. 2004. Continued colonization of the human genome by mitochondrial DNA. PLoS Biol. 2:E273.
    • (2004) Plos Biol , vol.2
    • Ricchetti, M.1    Tekaia, F.2    Dujon, B.3
  • 34
    • 2442637641 scopus 로고    scopus 로고
    • NUMTs in sequenced eukaryotic genomes
    • Richly, E., and D. Leister. 2004. NUMTs in sequenced eukaryotic genomes. Mol. Biol. Evol. 21:1081-1084.
    • (2004) Mol. Biol. Evol , vol.21 , pp. 1081-1084
    • Richly, E.1    Leister, D.2
  • 35
    • 0347927254 scopus 로고    scopus 로고
    • The spoilage yeast Zygosaccharomyces bailii forms mitotic spores: A screening method for haploidization
    • Rodrigues, F., P. Ludovico, M. J. Sousa, H. Y. Steensma, M. Corte-Real, and C. Leao. 2003. The spoilage yeast Zygosaccharomyces bailii forms mitotic spores: a screening method for haploidization. Appl. Environ. Microbiol. 69:649-653.
    • (2003) Appl. Environ. Microbiol , vol.69 , pp. 649-653
    • Rodrigues, F.1    Ludovico, P.2    Sousa, M.J.3    Steensma, H.Y.4    Corte-Real, M.5    Leao, C.6
  • 36
    • 0029761050 scopus 로고    scopus 로고
    • Use of RAPD and mitochondrial DNA RFLP for typing of Candida zeylanoides and Debaryomyces hansenii yeast strains isolated from cheese
    • Romano, A., S. Casaregola, P. Torre, and C. Gaillardin. 1996. Use of RAPD and mitochondrial DNA RFLP for typing of Candida zeylanoides and Debaryomyces hansenii yeast strains isolated from cheese. Syst. Appl. Microbiol. 19:255-264.
    • (1996) Syst. Appl. Microbiol , vol.19 , pp. 255-264
    • Romano, A.1    Casaregola, S.2    Torre, P.3    Gaillardin, C.4
  • 38
    • 23944453340 scopus 로고    scopus 로고
    • Forty million years of independent evolution: A mitochondrial gene and its corresponding nuclear pseudogene in primates
    • Schmitz, J., O. Piskurek, and H. Zischler. 2005. Forty million years of independent evolution: a mitochondrial gene and its corresponding nuclear pseudogene in primates. J. Mol. Evol. 61:1-11.
    • (2005) J. Mol. Evol , vol.61 , pp. 1-11
    • Schmitz, J.1    Piskurek, O.2    Zischler, H.3
  • 39
    • 54049096710 scopus 로고    scopus 로고
    • Interspecies hybridization and recombination in Saccharomyces wine yeasts
    • Sipiczki, M. 2008. Interspecies hybridization and recombination in Saccharomyces wine yeasts. FEMS Yeast Res. 8:996-1007.
    • (2008) Fems Yeast Res , vol.8 , pp. 996-1007
    • Sipiczki, M.1
  • 40
    • 56049115816 scopus 로고    scopus 로고
    • Genome size and ploidy level: New insights for elucidating relationships in Zygosaccharo- myces species
    • Solieri, L., S. Cassanelli, M. A. Croce, and P. Giudici. 2008. Genome size and ploidy level: new insights for elucidating relationships in Zygosaccharo- myces species. Fungal Genet Biol. 45:1582-1590.
    • (2008) Fungal Genet Biol , vol.45 , pp. 1582-1590
    • Solieri, L.1    Cassanelli, S.2    Croce, M.A.3    Giudici, P.4
  • 41
    • 0036296922 scopus 로고    scopus 로고
    • Structure and chromosomal distribution of human mitochondrial pseudogenes
    • Tourmen, Y., O. Baris, P. Dessen, C. Jacques, Y. Malthiery, and P. Reynier. 2002. Structure and chromosomal distribution of human mitochondrial pseudogenes. Genomics 80:71-77.
    • (2002) Genomics , vol.80 , pp. 71-77
    • Tourmen, Y.1    Baris, O.2    Dessen, P.3    Jacques, C.4    Malthiery, Y.5    Reynier, P.6
  • 42
    • 36448952310 scopus 로고    scopus 로고
    • Molecular analyses of mitochondrial pseudogenes within the nuclear genome of arvicoline rodents
    • Triant, D. A., and J. A. DeWoody. 2008. Molecular analyses of mitochondrial pseudogenes within the nuclear genome of arvicoline rodents. Genetica 132:21-33.
    • (2008) Genetica , vol.132 , pp. 21-33
    • Triant, D.A.1    Dewoody, J.A.2
  • 43
    • 0017742887 scopus 로고
    • Ploidy, ascus formation and recombination in Torulaspora (Debaryomyces) hansenii
    • van der Walt, J. P., M. B. Taylor, and N. V. Liebenberg. 1977. Ploidy, ascus formation and recombination in Torulaspora (Debaryomyces) hansenii. Antonie Van Leeuwenhoek 43:205-218.
    • (1977) Antonie Van Leeuwenhoek , vol.43 , pp. 205-218
    • van der Walt, J.P.1    Taylor, M.B.2    Liebenberg, N.V.3
  • 44
    • 0028794516 scopus 로고
    • Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C
    • Winston, F., C. Dollard, and S. L. Ricupero-Hovasse. 1995. Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C. Yeast 11:53-55.
    • (1995) Yeast , vol.11 , pp. 53-55
    • Winston, F.1    Dollard, C.2    Ricupero-Hovasse, S.L.3
  • 45
    • 0033231558 scopus 로고    scopus 로고
    • Patching broken chromosomes with extranuclear cellular DNA
    • Yu, X., and A. Gabriel. 1999. Patching broken chromosomes with extranuclear cellular DNA. Mol. Cell 4:873-881.
    • (1999) Mol. Cell , vol.4 , pp. 873-881
    • Yu, X.1    Gabriel, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.