-
1
-
-
10244225346
-
Representation and use of chemistry in the global electronic age
-
Murray-Rust, P.; Rzepa, H. R.; Tyrell, S. M.; Zhang, Y. Representation and Use of Chemistry in the Global Electronic Age. Org. Biomol. Chem. 2004, 2, 3192-3203.
-
(2004)
Org. Biomol. Chem.
, vol.2
, pp. 3192-3203
-
-
Murray-Rust, P.1
Rzepa, H.R.2
Tyrell, S.M.3
Zhang, Y.4
-
2
-
-
0038512091
-
Chemical markup, XML and the worldwide Web. CML schema
-
Murray-Rust, P.; Rzepa, H. S. Chemical Markup, XML and the Worldwide Web. CML Schema. J. Chem. Inf. Comput. Sci. 2003, 43, 757-772.
-
(2003)
J. Chem. Inf. Comput. Sci.
, vol.43
, pp. 757-772
-
-
Murray-Rust, P.1
Rzepa, H.S.2
-
3
-
-
33750120665
-
-
Manola, F.; Miller E. (Eds.) (accessed November 26, 2009)
-
Manola, F.; Miller E. (Eds.) RDF Primer, World Wide Web Consortium W3C, 2004; http://www.w3.org/TR/rdf-primer/ (accessed November 26, 2009).
-
(2004)
RDF Primer
-
-
-
4
-
-
77649203841
-
-
Digital Preservation Coalition and The Association for Information & Image Management (AIIM), (accessed November 26, 2009)
-
Fanning, B. A. Preserving the Data Explosion: Using PDF. Digital Preservation Coalition and The Association for Information & Image Management (AIIM), 2008; http://www.dpconline.org/docs/reports/dpctw08-02.pdf (accessed November 26, 2009).
-
(2008)
Preserving the Data Explosion: Using PDF
-
-
Fanning, B.A.1
-
5
-
-
0033912796
-
Finding drug candidates in lost/emerging chemistry
-
de Laet, A.; Hehenkamp, J. J.; Wife, R. L. Finding Drug Candidates in Lost/Emerging Chemistry. J. Heterocvcl. Chem. 2000, 37, 669674.
-
(2000)
J. Heterocvcl. Chem.
, vol.37
, pp. 669674
-
-
De Laet, A.1
Hehenkamp, J.J.2
Wife, R.L.3
-
6
-
-
77649217745
-
-
Electronic Theses Online Service (EthOSnet). (accessed November 26, 2009)
-
Electronic Theses Online Service (EthOSnet). http://www.ethos.ac.uk/ (accessed November 26, 2009).
-
-
-
-
7
-
-
77649225734
-
-
Narcis, the Gateway to Dutch Scientific Information: Promise of Science. (accessed November 26, 2009)
-
Narcis, the Gateway to Dutch Scientific Information: Promise of Science. 2009; http://www.narcis.info/index/tab/publication/Language/en/ (accessed November 26, 2009).
-
(2009)
-
-
-
8
-
-
77649230866
-
-
DART-Europe E-theses Portal (DEEP). (accessed November 26, 2009)
-
DART-Europe E-theses Portal (DEEP). 2007; http://www.dart-europe. eu/index.php/index (accessed November 26, 2009).
-
(2007)
-
-
-
9
-
-
77649195470
-
-
ADT Australasian Digital Theses Program. (accessed November 26, 2009)
-
ADT Australasian Digital Theses Program. 2009; http://adt.caul.edu.au/ (accessed November 26, 2009).
-
(2009)
-
-
-
12
-
-
33748436824
-
Aggregation of bioinformatics data
-
Stephens, S.; La Vigna, D.; DiLascio, M.; Luciano, J. Aggregation of Bioinformatics Data. Web Semantics 2006, 4, 216-221.
-
(2006)
Web Semantics
, vol.4
, pp. 216-221
-
-
Stephens, S.1
La Vigna, D.2
Dilascio, M.3
Luciano, J.4
-
14
-
-
77649196296
-
-
ISO 19005-1:2005, Document Management-Electronic Document File Format for Long-Term Preservation-Part 1: Use of PDF 1.4 (PDF/A-1). 2006; (accessed November 26, 2009)
-
ISO 19005-1:2005, Document Management-Electronic Document File Format for Long-Term Preservation-Part 1: Use of PDF 1.4 (PDF/A-1). 2006; http://www.aiim.org/documents/standards/19005-l-FAQ.pdf (accessed November 26, 2009).
-
-
-
-
15
-
-
84921771798
-
-
(accessed November 26, 2009)
-
What is Tagged PDF? http://www.planetpdf.com/mainpage. asp?webpageid=1269 (accessed November 26, 2009).
-
What is Tagged PDF?
-
-
-
18
-
-
0347670481
-
-
(accessed November 26, 2009)
-
Dublin Core Metadata Initiative. 2009; http://www.dublincore.org/ (accessed November 26, 2009).
-
(2009)
Dublin Core Metadata Initiative
-
-
-
19
-
-
77649206746
-
-
Ph.D. Thesis Regulations, California Institute of Technology, (accessed November 26, 2009)
-
Ph.D. Thesis Regulations, California Institute of Technology, 2008; http://www.gradofflce.caltech.edu/documents/PHD-Thesisregulations. pdf (accessed November 26, 2009).
-
(2008)
-
-
-
20
-
-
77649203842
-
-
Specifications for Thesis Preparation, Massachusetts Institute of Technology, (accessed November 26, 2009)
-
Specifications for Thesis Preparation, Massachusetts Institute of Technology, 2009; http://libraries.mit.edu/archives/thesis-specs/ (accessed November 26, 2009).
-
(2009)
-
-
-
24
-
-
77649231060
-
-
TheOREM Marked-up Theses, (accessed November 29, 2009)
-
Downing, J.; Murray-Rust, P. TheOREM Marked-up Theses, 2009; http://wwmm.ch.cam.ac.uk/projects/theorem/theses/ (accessed November 29, 2009).
-
(2009)
-
-
Downing, J.1
Murray-Rust, P.2
-
25
-
-
33847396431
-
Mining patents using molecular similarity search
-
Rhodes, J.; Boyer, S.; Kreulen, J.; Chen, Y.; Ordonez, P. Mining Patents Using Molecular Similarity Search. Pacific Symp. Biocomput. 2007, 12, 304-315.
-
(2007)
Pacific Symp. Biocomput.
, vol.12
, pp. 304-315
-
-
Rhodes, J.1
Boyer, S.2
Kreulen, J.3
Chen, Y.4
Ordonez, P.5
-
26
-
-
77649230661
-
Identification of chemical entities in patent documents
-
Omatu, S., et al., Eds.; Springer-Verlag: Berlin
-
Grego, T.; Peak, P.; Couto, F. M.; Rebholz-Schuhmann, D. Identification of Chemical Entities in Patent Documents. IWANN; Omatu, S., et al., Eds.; Springer-Verlag: Berlin, 2009; pp 941-948.
-
(2009)
IWANN
, pp. 941-948
-
-
Grego, T.1
Peak, P.2
Couto, F.M.3
Rebholz-Schuhmann, D.4
-
27
-
-
54949111758
-
FACTA: A text search engine for finding associated biomedical concepts
-
Tsuruoka, Y.; Tsujii, J; Ananiadou, S. FACTA: A Text Search Engine for Finding Associated Biomedical Concepts. Bioinformatics 2008, 24, 2559-2560
-
(2008)
Bioinformatics
, vol.24
, pp. 2559-2560
-
-
Tsuruoka, Y.1
Tsujii, J.2
Ananiadou, S.3
-
29
-
-
77649209433
-
Project prospect from the RSC: The evolving journal article and chemical education
-
New Orleans, LA, April Abstracts of Papers
-
(a) Kidd, R. Project Prospect from the RSC: The Evolving Journal Article and Chemical Education. Abstracts of Papers; 235th ACS National Meeting, New Orleans, LA, April 6-10, 2008.
-
(2008)
235th ACS National Meeting
, pp. 6-10
-
-
Kidd, R.1
-
30
-
-
77649196682
-
Project prospect and the InChI
-
Salt Lake City, UT, March Abstracts of Papers; 237th
-
(b) Batchelor, C. R. Project Prospect and the InChI. Abstracts of Papers; 237th. ACS National Meeting, Salt Lake City, UT, March. 22-26, 2009.
-
(2009)
ACS National Meeting
, pp. 22-26
-
-
Batchelor, C.R.1
-
31
-
-
33750289875
-
High-throughput identification of chemistry in life science texts
-
Springer: Berlin
-
Corbett, P.; Murray-Rust, P. High-Throughput Identification of Chemistry in Life Science Texts. Computational Life Sciences II: Springer: Berlin, 2006; pp 107-118.
-
(2006)
Computational Life Sciences II
, pp. 107-118
-
-
Corbett, P.1
Murray-Rust, P.2
-
32
-
-
10244246688
-
Chemical documents: Machine understanding and automated. Information extraction
-
Townsend, J. A.; Adams, S. E.; Waudby, C. A.; de Souza, V. K.; Goodman, J. M.; Murray-Rust, P. Chemical Documents: Machine Understanding and Automated. Information Extraction. Org. Biomol. Chem. 2004, 2, 3294-3300.
-
(2004)
Org. Biomol. Chem.
, vol.2
, pp. 3294-3300
-
-
Townsend, J.A.1
Adams, S.E.2
Waudby, C.A.3
De Souza, V.K.4
Goodman, J.M.5
Murray-Rust, P.6
-
33
-
-
77649220709
-
Flexible interfaces in the application of language technology to an escience corpus
-
Nottingham, UK
-
Rupp, C. J.; Copestake, A.; Teufel, S.; Waldron, B. Flexible Interfaces in the Application of Language Technology to an eScience Corpus. Proceedings of the 4th UK E-Science All Hands Meeting; Nottingham, UK, 2006.
-
(2006)
Proceedings of the 4th UK E-Science All Hands Meeting
-
-
Rupp, C.J.1
Copestake, A.2
Teufel, S.3
Waldron, B.4
-
34
-
-
77649210679
-
-
Command line-driven software to enable the described workflows and interface with OSCAR3 has been written in Java and is available as Open Source on the SourceForge website: (accessed November 29, 2009)
-
Command line-driven software to enable the described workflows and interface with OSCAR3 has been written in Java and is available as Open Source on the SourceForge website: https://spectra-chem.svn. sourceforge.net/svnroot/ spectra-chem/spectrat-textmining/trunk/ (accessed November 29, 2009).
-
-
-
-
35
-
-
38549127678
-
ChEBI: A database and ontology for chemical entities of biological interest
-
(database issue)
-
Degtyarenko, K.; de Matos, P.; Ennis, M.; Hastings, J.; Zbinden, M.; McNaught, A.; Alcántara, R.; Darsow, M.; Guedj, M.; Ashburner, M. ChEBI: A Database and Ontology for Chemical Entities of Biological Interest. Nucleic Acids- Res. 2008, 36, D344-D350 (database issue).
-
(2008)
Nucleic Acids- Res.
, vol.36
-
-
Degtyarenko, K.1
De Matos, P.2
Ennis, M.3
Hastings, J.4
Zbinden, M.5
McNaught, A.6
Alcántara, R.7
Darsow, M.8
Guedj, M.9
Ashburner, M.10
-
37
-
-
77649213284
-
-
(accessed November 29, 2009)
-
PubChem. 2009; http://pubchem.ncbi.nlm.nih.gov/ (accessed November 29, 2009).
-
(2009)
PubChem.
-
-
-
38
-
-
85037533901
-
A standoff annotation interface between DELPH-IN components
-
Trento, Italy
-
Waldron, B.; Copestake, A. A Standoff Annotation Interface between DELPH-IN Components. NLPXMI,-2006 (Multi-Dimensional Markup in Natural Language Processing), Trento, Italy, 2006.
-
(2006)
NLPXMI,-2006 (Multi-Dimensional Markup in Natural Language Processing)
-
-
Waldron, B.1
Copestake, A.2
-
40
-
-
77649223864
-
-
CambridgeSoft, 100 Cambridge Park Drive, Cambridge, MA 02140 (accessed November 26, 2009)
-
CambridgeSoft, 100 Cambridge Park Drive, Cambridge, MA 02140 [http://www.cambridgesoft.com (accessed November 26, 2009)].
-
-
-
-
41
-
-
77649213462
-
-
Symyx Technologies, 2440 Camino Ramon, San Ramon, CA 94583 (accessed November 26, 2009)
-
Symyx Technologies, 2440 Camino Ramon, San Ramon, CA 94583 [http://www.symyx.com (accessed November 26, 2009)].
-
-
-
-
42
-
-
85128246389
-
-
53a showed ca. 170 such sections to be present, which were identified with 95% success rate
-
53a showed ca. 170 such sections to be present, which were identified with 95% success rate.
-
-
-
-
43
-
-
85128250200
-
-
53 95% of the preparative procedures were of chiral structures
-
53 95% of the preparative procedures were of chiral structures.
-
-
-
-
44
-
-
77649205045
-
-
XML Pointer Language (XPointer), W3C, (accessed November 29, 2009)
-
XML Pointer Language (XPointer), W3C, 2001; http://www.w3.org/TR/WD-xptr (accessed November 29, 2009).
-
(2001)
-
-
-
45
-
-
56649102386
-
Cascaded classifiers for confidence-based chemical named entity recognition
-
(accessed November 29, 2009)
-
Corbett, P.; Copestake, A. Cascaded classifiers for confidence-based chemical named entity recognition. BMC Bioinf. 2008, 9 (Suppl 11), S4; http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2586753 (accessed November 29, 2009).
-
(2008)
BMC Bioinf.
, vol.9
, Issue.SUPPL. 11
-
-
Corbett, P.1
Copestake, A.2
-
47
-
-
77649226902
-
-
Web Ontology Language OWL, W3C, (accessed November 26, 2009)
-
Web Ontology Language OWL, W3C, 2004; http://www.w3.org/TR/owl-features/ (accessed November 26, 2009).
-
(2004)
-
-
-
48
-
-
77649215011
-
-
SKOS, W3C, (accessed November 26, 2009)
-
SKOS, W3C, 2008; http://www.w3.org/TR/2008/WD-skos-reference-20080609/ (accessed November 26, 2009).
-
(2008)
-
-
-
49
-
-
77649216944
-
Semantic chemistry
-
(accessed November 29, 2009)
-
Adams, N.; Semantic Chemistry, Semantic Technology Conference, 2009. http://semanticuniverse.com/articles-semantic-chemistry.html(accessed November 29, 2009).
-
(2009)
Semantic Technology Conference
-
-
Adams, N.1
-
50
-
-
57549105484
-
Chemical ,markup, XML and the world-wide web. 8. Polymer markup language
-
and references cited therein
-
Adams, N.; Winter, J.; Murray-Rust, P.; Rzepa, H. S. Chemical Markup, XML and the World-Wide Web. 8. Polymer Markup Language. J. Chem, Inf. Model. 2008, 48, 2118-2128, and references cited therein.
-
(2008)
J. Chem, Inf. Model.
, vol.48
, pp. 2118-2128
-
-
Adams, N.1
Winter, J.2
Murray-Rust, P.3
Rzepa, H.S.4
-
51
-
-
33745728746
-
Bringing chemical data onto the semantic web
-
Taylor, K. R.; Gledhill, R. J.; Essex, J. W.; Frey, J. G.; Harris, S. W.; De Roure, D. C. Bringing Chemical Data onto the Semantic Web. J. Chem. Inf. Model. 2006, 46, 939-952.
-
(2006)
J. Chem. Inf. Model.
, vol.46
, pp. 939-952
-
-
Taylor, K.R.1
Gledhill, R.J.2
Essex, J.W.3
Frey, J.G.4
Harris, S.W.5
De Roure, D.C.6
-
52
-
-
33845723240
-
Semantic eye: A semantic web application to rationalize and enhance chemical electronic publishing
-
Casher, O.; Rzepa, H. R. Semantic Eye: A Semantic Web Application to Rationalize and Enhance Chemical Electronic Publishing. J. Chem. Inf. Model. 2006, 46, 2396-2411.
-
(2006)
J. Chem. Inf. Model.
, vol.46
, pp. 2396-2411
-
-
Casher, O.1
Rzepa, H.R.2
-
53
-
-
72149092490
-
-
(accessed November 26, 2009)
-
Dodds, L. Introducing SPARQL: Querying the Semantic Web. 2005; http://www.xml.com/pub/a/2005/11/16/introducing-sparql-querying-semantic-web- tutorial.html (accessed November 26, 2009).
-
(2005)
Introducing SPARQL: Querying the Semantic Web
-
-
Dodds, L.1
-
55
-
-
77649217542
-
Iminium and enamine activation methods for enantioselective organocatalysis
-
(accessed November 26, 2009)
-
(b) Brown, S. B. Iminium and Enamine Activation Methods for Enantioselective Organocatalysis; CalTech, 2005; http://etd.caltech.edu/etd/ available/etd-02242005-174252/ (accessed November 26, 2009).
-
(2005)
CalTech
-
-
Brown, S.B.1
-
56
-
-
77649217744
-
Development of the lewis acid catalyzed allenoate-claisen rearrangement
-
Investigations of Enantioselective Catalysis of the AllenoateClaisen Rearrangement. (accessed November 26, 2009)
-
(c) Lambert, T. H. Development of the Lewis Acid Catalyzed Allenoate-Claisen Rearrangement. Investigations of Enantioselective Catalysis of the AllenoateClaisen Rearrangement. Studies towards the Total Synthesis of Erythrolide E; CalTech, 2004; http://etd.caltech.edu/etd/available/etd-12112003- 091509 (accessed November 26, 2009).
-
(2004)
Studies Towards the Total Synthesis of Erythrolide E; CalTech
-
-
Lambert, T.H.1
-
57
-
-
84901002352
-
Annotation of chemical named entities
-
Association for Computational Linguistics: Morristown, NJ
-
Corbett, P.; Batchelor, C.; Teufel, S. Annotation of Chemical Named Entities. Proceedings of the Workshop on BioNLP 2007: Biological, Translations and Clinical Language Processing; Association for Computational Linguistics: Morristown, NJ, 2007; pp 57-64.
-
(2007)
Proceedings of the Workshop on BioNLP 2007: Biological, Translations and Clinical Language Processing
, pp. 57-64
-
-
Corbett, P.1
Batchelor, C.2
Teufel, S.3
-
58
-
-
77649224676
-
-
(accessed November 29, 2009)
-
JISC Repositories and Preservation Programme; 2009; http://www.jisc. ac.uk/whatwedo/programmes/reppres.aspx (accessed November 29, 2009).
-
(2009)
JISC Repositories and Preservation Programme
-
-
|