Occupancy as a surrogate for abundance estimation

Animal Biodiversity and Conservation

Volumn 27, Issue 1, 2004, Pages 461-467

  MacKenzie, Darryl I ^a   Nichols, James D ^b  

^a Proteus Wildlife Research Consultants   (New Zealand)

^b PATUXENT WILDLIFE RESEARCH CENTER   (United States)

Author keywords

Abundance; Metapopulation; Monitoring; Occupancy; Species distribution

Indexed keywords

ABUNDANCE ESTIMATION;

AVES;

EID: 7744235753     PISSN: 1578665X     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (18)

1. Barbraud, C., Nichols, J. D., Hines, J. E. & Hafner, H., 2003. Estimating rates of extinction and colonization in colonial species and an extension to the metapopulation and community levels. Oikos, 101: 113-126.
2. Bradford, D. F., Neale, A. C., Nash, M. S., Sada, D. W. & Jaeger, J. R., 2003. Habitat patch occupancy by toads (Bufo punctatus) in a naturally fragmented desert landscape. Ecology, 84: 1012-1023.
3. Brown, J. H. & Kodric-Brown, A., 1977. Turnover rates in insular biogeography: effect of Immigration on extinction. Ecology, 58: 445-449.
4. Hanski, I., 1992. Inferences from ecological incidence functions. American Naturalist, 139: 657-662.
5. Hanski, I., 1994. A practical model of metapopulation dynamics. Journal of Animal Ecology, 63: 151-162.
6. Hanski, I., 1997. Metapopulation dynamics: from concepts and observations to predictive models. In: Metapopulation biology: ecology, genetics, and evolution: 69-91 (I. A. Hanski & M. E. Gilpin, Eds.). Academic Press, New York, U.S.A.
7. MacKenzie, D. I. & Bailey, L. L. (in press). Assessing the fit of site occupancy models. Journal of Agricultural, Biological and Environmental Statistics.
8. MacKenzie, D. I., Bailey, L. L. & Nichols, J. D., 2004. Investigating patterns of species co-occurrence when species are detected imperfectly. Journal of Animal Ecology, 73: 546-555.
9. MacKenzie, D. I., Nichols, J. D. Hines, J. E., Knutson, M. G. & Franklin, A. D., 2003. Estimating site occupancy, colonization and local extinction probabilities when a species is not detected with certainty. Ecology, 84: 2200-2207.
10. MacKenzie, D. I., Nichols, J. D., Lachman, G. B., Droege, S., Royle, J. A. & Langtimm, C. A., 2002. Estimating site occupancy rates when detection probabilities are less than one. Ecology, 83: 2248-2255.
11. Royle, J. A. (in press). N-mixture models for estimating population size from spatially replicated counts. Biometrics.
12. Royle, J. A. & Nichols, J. D., 2003. Estimating abundance from repeated presence-absence data or point counts. Ecology, 84: 777-790.
13. Schmidt, B. R., 2003. Count data, detection probabilities, and the demography, dynamics, distribution, and decline of amphibians. Comptes Rendus Biologies, 326: S119-S124
14. Stauffer, H. B., Ralph, C. J. & Miller, S. L., 2002. Incorporating detection uncertainty into presence-absence surveys for marbled murrelet. In: Predicting species occurances: 357-365 (J. M. Scott, P. J. Heglund, M. L. Morrison, J. B. Haufler, M. G. Raphael, W. A. Wall & F. B. Samson, Eds.). Island Press, Washington, District of Columbia, U.S.A.
15. Tyre, A. J., Possingham, H. P. & Lindenmayer, D. B., 2001. Inferring process from pattern: can territory occupancy provide information about life history parameters? Ecological Applications, 11: 1722-1737.
16. Tyre, A. J., Tenhumberg, B., Field, S. A., Niejalke, D., Parris, K. & Possingham, H. P., 2003. Improving precision and reducing bias in biological surveys by estimating false negative error rates in presence-absence data. Ecological Applications, 13: 1790-1801.
17. Williams, B. K., Nichols, J. D. & Conroy, M. J., 2002. Analysis and management of animal populations. Academic Press, New York.
18. Yoccoz, N. G., Nichols, J. D. &. Boulinier, T., 2001. Monitoring of biological diversity in space and time. Trends in Ecology and Evolution, 16: 446-453.