Isolation and expression analysis of a poriferan Antp-class Bar-/Bsh-like homeobox gene

Development Genes and Evolution

Volumn 214, Issue 10, 2004, Pages 515-523

  Hill, April ^a,b   Tetrault, Jeff ^a   Hill, Malcolm ^a,b  

^a FAIRFIELD UNIVERSITY   (United States)

^b UNIVERSITY OF RICHMOND   (United States)

Author keywords

Halichondria; Metazoa; Molecular evolution; Non Hox gene; Sponge development

Indexed keywords

HOMEODOMAIN PROTEIN;

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; DEVELOPMENTAL STAGE; DOWN REGULATION; EYE DEVELOPMENT; GENE EXPRESSION; GENE IDENTIFICATION; GENE ISOLATION; GENETIC ANALYSIS; GENETIC DIFFERENCE; LARVAL STAGE; MAXIMUM LIKELIHOOD METHOD; METAZOON; MULTIGENE FAMILY; NERVOUS SYSTEM DEVELOPMENT; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY; SPONGE (PORIFERA); SWIMMING; VISUAL SYSTEM;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE LIBRARY; HOMEODOMAIN PROTEINS; LIKELIHOOD FUNCTIONS; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDES; PHYLOGENY; PORIFERA; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA;

EUMETAZOA; HALICHONDRIA; METAZOA;

EID: 7744227262     PISSN: 0949944X     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00427-004-0431-3     Document Type: Article

References (27)

1. Adachi J, Hasegawa M (1992) Amino acid substitution of proteins coded for in mitochondrial DNA during mammalian evolution. Jpn J Genet 67:187-197
2. Bavestrello G, Benatti U, Calcinai B, Cattaneo-Vietti R, Cerrano C, Favre A, Giovine M, Lanza S, Pronzato R, Sara M (1998) Body polarity and mineral selectivity in the demosponge Chondrosia reniformis . Biol Bull 195:120-125
3. Bulfone A, Menguzzato E, Broccoli V, Marchitiello A, Gattuso C, Mariani M, Consalez G, Martinez S, Ballabio A, Banfi S (2000) Barhl1, a gene belonging to a new subfamily of mammalian homeobox genes, is expressed in migrating neurons of the CNS. Hum Mol Genet 9(9):1443-1452
4. Carroll SB, Grenier JK, Weatherbee SD (2001) From DNA to diversity: molecular genetics and the evolution of animal design. Blackwell Scientific, Malden
5. Coutinho CC, Vissers S, Van de Vyver G (1994) Evidence of homeobox genes in the fresh water sponge Ephydatia fluviatilis. In: Van Soest RWM, van Kempen TMG, Braekman JC (eds) Sponges in time and space. AA Balkema, Rotterdam, pp 385-388
6. Coutinho CC, Fonseca RN, Mansure JC, Borojevic R (2003) Early steps in the evolution of multicellularity: Deep structural and functional homologies among homeobox genes in sponges and higher metazoans. Mech Dev 120:429-440
7. Degnan BM, Degnan SM, Giusti A, Morse DE (1995) A hox/hom homeobox gene in sponges. Gene 155:175-177
8. Gauchat D, Mazet F, Berney C, Schummer M, Kreger S, Pawlowski J, Galliot B (2000) Evolution of Antp -class genes and differential expression of Hydra Hox/paraHox genes in anterior patterning. Proc Natl Acad Sci USA 97(9):4493-4498
9. Hayashi T, Kojima T, Saigo K (1998) Specification of primary pigment cell and outer photoreceptor fates by BarH1 homeobox gene in the developing Drosophila eye. Dev Biol 200:131-145
10. Hoshiyama D, Suga H, Iwabe N, Koyanagi M, Nikoh N, Kuma K, Matsuda F, Honjo T, Miyata T (1998) Sponge Pax cDNA related to Pax-2/5/8 and ancient gene duplications in the Pax family. J Mol Evol 47:640-648
11. Humphreys T (1963) Chemical dissolution and in vitro reconstruction of sponge cell adhesions. I. Isolation and functional demonstration of the components involved. Dev Biol 8:27-47
12. Jones B, McGinnis W (1993) A new Drosophila homeobox gene, bsh , is expressed in a subset of brain cells during embryogenesis. Development 117:793-806
13. Kojima T, Sato M, Saigo K (2000) Formation and specification of distal leg segments in Drosophila by dual Bar homeobox genes, BarH1 and BarH2. Development 127:769-778
14. Kruse M, Mikoc A, Cetkovic H, Gamulin V, Rinkevich B, Muller IM, Muller WEG (1994) Molecular evidence for the presence of a developmental gene in the lowest animals: Identification of a homeobox-like gene in the marine sponge Geodia cydonium. Mech Ageing Dev 77:43-54
15. Leith A (1979) Role of aggregation factor and cell type in sponge cell adhesion. Biol Bull 156:212-223
16. Leys SP, Degnan BM (2001) Cytological basis of photoresponsive behavior in a sponge larva. Biol Bull 201:323-338
17. Leys SP, Reiswig HM (1998) Transport pathways in the neotropical sponge Aplysina . Biol Bull 195:30-42
18. Manuel M, Le Parco Y (2000) Homeobox diversification in the calcareous sponge, Sycon raphanus. Mol Phylogenet Evol 17:97-107
19. Perovic S, Schroder HC, Sudek S, Grebenjuk VA, Batel R, Stifanic M, Muller IM, Muller WEG (2003) Expression of one sponge Iroquois homeobox gene in primorphs from Suberites domuncula during canal formation. Evol Dev 5:240-250
20. Richelle-Maurer E, Van de Vyver G (1999) Temporal and spatial expression of EmH-3, a homeobox-containing gene isolated from the freshwater sponge Ephydatia muelleri. Mech Ageing Dev 109:203-219
21. Sato M, Kojima T, Michiue T, Saigo K (1999) Bar homeobox genes are latitudinal prepattern genes in the developing Drosophila notum whose expression is regulated by the concerted functions of decapentaplegic and wingless. Development 126:1457-1466
22. Schummer M, Scheurlen I, Schaller C, Galliot B (1992) HOM/HOX homeobox genes are present in hydra (Chlorohydra viridissima) and are differentially expressed during regeneration. EMBO J 11:1815-1823
23. Seimiya M, Ishiguro H, Miura K, Watanabe Y, Kurosawa Y (1994) Homeobox-containing genes in the most primitive metazoa, the sponges. Eur J Biochem 221:219-225
24. Seimiya M, Watanabe Y, Kurosawa Y (1997) Identification of POU-class homeobox genes in a freshwater sponge and the specific expression of these genes during differentiation. Eur J Biochem 243:27-31
25. Simpson TL (1984) The cell biology of sponges. Springer, Berlin Heidelberg New York
26. Strimmer K, von Haeseler A (1996) Quartet-puzzling: A quartet maximum likelihood method for reconstructing tree topologies. Mol Biol Evol 13:964-969
27. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: Improving the sensitivity of progressive multiple-sequence alignment through sequence weighting, position-specific gap penalties, and weight matrix choice. Nucleic Acids Res 22:4673-4680