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Volumn 86, Issue 2, 2010, Pages 567-576

Analysis of extracellular alginate lyase and its gene from a marine bacterial strain, Pseudoalteromonas atlantica AR06

Author keywords

Bifunctional alginate lyase; Expression of alyA gene; Extracellular enzyme; Pseudoalteromonas atlantica

Indexed keywords

ALGINATE LYASE; BIFUNCTIONAL; EXPRESSION OF ALYA GENE; EXTRACELLULAR ENZYMES; PSEUDOALTEROMONAS;

EID: 77249179650     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-009-2278-z     Document Type: Article
Times cited : (40)

References (28)
  • 1
    • 0026716983 scopus 로고
    • An ultraviolet-spectrophotometric method with 2-cyanoacetamide for the determination of the enzymatic degradation of reducing polysaccharides
    • 10.1016/0003-2697(92)90321-W 1:CAS:528:DyaK38XktVejtLw%3D
    • E Bach E Schollmeyer 1992 An ultraviolet-spectrophotometric method with 2-cyanoacetamide for the determination of the enzymatic degradation of reducing polysaccharides Anal Biochem 203 335 339 10.1016/0003-2697(92)90321-W 1:CAS:528:DyaK38XktVejtLw%3D
    • (1992) Anal Biochem , vol.203 , pp. 335-339
    • Bach, E.1    Schollmeyer, E.2
  • 2
    • 0025513679 scopus 로고
    • Preparation of guluronate lyase from Pseudomonas alginovora for protoplast isolation in Laminaria
    • DOI 10.1016/0141-0229(90)90027-N
    • C Boyen Y Bertheau T Barberyron B Kloareg 1990 Preparation of guluronate lyase from Pseudomonas alginovora for protoplast isolation in Laminaria Enzyme Microb Technol 12 885 890 10.1016/0141-0229(90)90027-N 1:CAS:528: DyaK3MXhvFyqsw%3D%3D (Pubitemid 20359618)
    • (1990) Enzyme and Microbial Technology , vol.12 , Issue.11 , pp. 885-890
    • Boyen, C.1    Bertheau, Y.2    Barbeyron, T.3    Kloareg, B.4
  • 3
    • 0014674485 scopus 로고
    • A complementation analysis of the restriction and modification of DNA in Escherichia coli
    • 10.1016/0022-2836(69)90288-5 1:CAS:528:DyaF1MXktF2kt7w%3D
    • HW Boyer D Roulland-Dussoix 1969 A complementation analysis of the restriction and modification of DNA in Escherichia coli J Mol Biol 41 459 472 10.1016/0022-2836(69)90288-5 1:CAS:528:DyaF1MXktF2kt7w%3D
    • (1969) J Mol Biol , vol.41 , pp. 459-472
    • Boyer, H.W.1    Roulland-Dussoix, D.2
  • 4
    • 0031869639 scopus 로고    scopus 로고
    • Plasposons: Modular self-cloning minitransposon derivatives for rapid genetic analysis of gram-negative bacterial genomes
    • 1:CAS:528:DyaK1cXkt1OgsL0%3D
    • JJ Dennis GJ Zylstra 1998 Plasposons: modular self-cloning minitransposon derivatives for rapid genetic analysis of gram-negative bacterial genomes Appl Environ Microbiol 64 2710 2715 1:CAS:528:DyaK1cXkt1OgsL0%3D
    • (1998) Appl Environ Microbiol , vol.64 , pp. 2710-2715
    • Dennis, J.J.1    Zylstra, G.J.2
  • 5
    • 0019997040 scopus 로고
    • Isolation of marine bacteria capable of producing specific lyases for alginate degradation
    • 1:CAS:528:DyaL38XlsF2hsbk%3D
    • RS Doubet RS Quatrano 1982 Isolation of marine bacteria capable of producing specific lyases for alginate degradation Appl Environ Microbiol 44 754 756 1:CAS:528:DyaL38XlsF2hsbk%3D
    • (1982) Appl Environ Microbiol , vol.44 , pp. 754-756
    • Doubet, R.S.1    Quatrano, R.S.2
  • 6
    • 4644262701 scopus 로고    scopus 로고
    • Recombinant protein production in Antarctic gram-negative bacteria
    • 1:CAS:528:DC%2BD2cXotFaht7s%3D
    • A Duilio ML Tutino G Marino 2004 Recombinant protein production in Antarctic gram-negative bacteria Methods Mol Biol 267 225 237 1:CAS:528:DC%2BD2cXotFaht7s%3D
    • (2004) Methods Mol Biol , vol.267 , pp. 225-237
    • Duilio, A.1    Tutino, M.L.2    Marino, G.3
  • 7
    • 0000527903 scopus 로고
    • Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans
    • DOI 10.1073/pnas.76.4.1648
    • DH Figurski DR Helinski 1979 Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans Proc Natl Acad Sci USA 76 1648 1652 10.1073/pnas.76.4.1648 1:CAS:528: DyaE1MXitVSitr0%3D (Pubitemid 9175374)
    • (1979) Proceedings of the National Academy of Sciences of the United States of America , vol.76 , Issue.4 , pp. 1648-1652
    • Figurski, D.H.1    Helinski, D.R.2
  • 8
    • 0035462315 scopus 로고    scopus 로고
    • Super-channel in Bacteria: Function and Structure of a Macromolecule Import System Mediated by a Pit-dependent ABC Transporter
    • DOI 10.1271/bbb.65.1949
    • W Hashimoto K Momma Y Mishima B Mikami K Murata 2001 Super-channel in bacteria: function and structure of a macromolecule import system mediated by a pit-dependent ABC transporter Biosci Biotechnol Biochem 65 1949 1956 10.1271/bbb.65.1949 1:CAS:528:DC%2BD3MXnsVyqsL4%3D (Pubitemid 33667808)
    • (2001) Bioscience, Biotechnology and Biochemistry , vol.65 , Issue.9 , pp. 1949-1956
    • Hashimoto, W.1    Momma, K.2    Mishima, Y.3    Mikami, B.4    Murata, K.5
  • 9
    • 0001702531 scopus 로고
    • A study of the constitution. of alginic acid by partial acid hydrolysis
    • 10.3891/acta.chem.scand.20-0183 1:CAS:528:DyaF28XosFyktw%3D%3D
    • A Haug B Larsen O Smidsrød 1966 A study of the constitution. of alginic acid by partial acid hydrolysis Acta Chem Scand 20 183 190 10.3891/acta.chem.scand.20-0183 1:CAS:528:DyaF28XosFyktw%3D%3D
    • (1966) Acta Chem Scand , vol.20 , pp. 183-190
    • Haug, A.1    Larsen, B.2    Smidsrød, O.3
  • 10
    • 0033621572 scopus 로고    scopus 로고
    • Small, stable shuttle vectors based on the minimal pVS1 replicon for use in gram-negative, plant-associated bacteria
    • 10.1094/MPMI.2000.13.2.232 1:CAS:528:DC%2BD3cXntFGqtA%3D%3D
    • S Heeb Y Itoh T Nishijyo U Schnider C Keel J Wade U Walsh F O'Gara D Haas 2000 Small, stable shuttle vectors based on the minimal pVS1 replicon for use in gram-negative, plant-associated bacteria Mol Plant Microbe Interact 13 232 237 10.1094/MPMI.2000.13.2.232 1:CAS:528:DC%2BD3cXntFGqtA%3D%3D
    • (2000) Mol Plant Microbe Interact , vol.13 , pp. 232-237
    • Heeb, S.1    Itoh, Y.2    Nishijyo, T.3    Schnider, U.4    Keel, C.5    Wade, J.6    Walsh, U.7    O'Gara, F.8    Haas, D.9
  • 11
    • 23644436849 scopus 로고    scopus 로고
    • Structure-activity relationship of alginate oligosaccharides in the induction of cytokine production from RAW264.7 cells
    • DOI 10.1016/j.febslet.2005.07.007, PII S001457930500846X
    • M Iwamoto M Kurachi T Nakashima D Kim K Yamaguchi T Oda Y Iwamoto T Muramatsu 2005 Structure-activity relationship of alginate oligosaccharides in the induction of cytokine production from RAW264.7 cells FEBS Lett 579 4423 4429 10.1016/j.febslet.2005.07.007 1:CAS:528:DC%2BD2MXnslyns7k%3D (Pubitemid 41116376)
    • (2005) FEBS Letters , vol.579 , Issue.20 , pp. 4423-4429
    • Iwamoto, M.1    Kurachi, M.2    Nakashima, T.3    Kim, D.4    Yamaguchi, K.5    Oda, T.6    Iwamoto, Y.7    Muramatsu, T.8
  • 12
    • 0036820587 scopus 로고    scopus 로고
    • Primary structure and chemical modification of some amino acid residues of bifunctional alginate lyase from a marine bacterium Pseudoalteromonas sp. strain no. 272
    • DOI 10.1023/A:1021347019863
    • Y Iwamoto K Iriyama K Osatomi T Oda T Muramatsu 2002 Primary structure and chemical modification of some amino acid residues of bifunctional alginate lyase from a marine bacterium Pseudoalteromonas sp. strain no. 272 J Protein Chem 21 455 463 10.1023/A:1021347019863 1:CAS:528:DC%2BD38Xpt1KqtLY%3D (Pubitemid 36062519)
    • (2002) Journal of Protein Chemistry , vol.21 , Issue.7 , pp. 455-463
    • Iwamoto, Y.1    Iriyama, K.2    Osatomi, K.3    Oda, T.4    Muramatsu, T.5
  • 13
    • 2842566126 scopus 로고    scopus 로고
    • A study of tryptophan fluorescence quenching of bifunctional alginate lyase from a marine bacterium Pseudoalteromonas sp. strain No. 272 by acrylamide
    • DOI 10.1271/bbb.67.1990
    • Y Iwamoto H Hidaka T Oda T Muramatsu 2003 A study of tryptophan fluorescence quenching of bifunctional alginate lyase from a marine bacterium Pseudoalteromonas sp. strain No. 272 by acrylamide Biosci Biotechnol Biochem 67 1990 1992 10.1271/bbb.67.1990 1:CAS:528:DC%2BD3sXotVWitrg%3D (Pubitemid 39251723)
    • (2003) Bioscience, Biotechnology and Biochemistry , vol.67 , Issue.9 , pp. 1990-1992
    • Iwamoto, Y.1    Hidaka, H.2    Oda, T.3    Muramatsu, T.4
  • 14
    • 85011247352 scopus 로고
    • Isolation of bacteria capable of producing alginate-degrading enzyme from natural environment
    • 1:CAS:528:DyaL1MXitFSrtrY%3D
    • M Kitamikado CH Tseng K Aoki K Yamaguchi T Araki 1989 Isolation of bacteria capable of producing alginate-degrading enzyme from natural environment Nippon Suisan Gakkaishi 55 709 713 1:CAS:528:DyaL1MXitFSrtrY%3D
    • (1989) Nippon Suisan Gakkaishi , vol.55 , pp. 709-713
    • Kitamikado, M.1    Tseng, C.H.2    Aoki, K.3    Yamaguchi, K.4    Araki, T.5
  • 16
    • 0037986207 scopus 로고    scopus 로고
    • Sample preparation effects in matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry of partially depolymerised carboxymethyl cellulose
    • DOI 10.1002/rcm.1032
    • D Momcilovic B Wittgren KG Wahlund J Karlsson G Brinkmalm 2003 Sample preparation effects in matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry of partially depolymerised carboxymethyl cellulose Rapid Commun Mass Spectrom 17 1107 1115 10.1002/rcm.1032 1:CAS:528:DC%2BD3sXksFems7g%3D (Pubitemid 36648654)
    • (2003) Rapid Communications in Mass Spectrometry , vol.17 , Issue.11 , pp. 1107-1115
    • Momcilovic, D.1    Wittgren, B.2    Wahlund, K.-G.3    Karlsson, J.4    Brinkmalm, G.5
  • 18
    • 0028434256 scopus 로고
    • Isolation and characterization of alginate-derived oligosaccharides with root growth-promoting activities
    • DOI 10.1016/0008-6215(94)84085-7
    • M Natsume Y Kamo M Hirayama T Adachi 1994 Isolation and characterization of alginate-derived oligosaccharides with root growth-promoting activities Carbohydr Res 258 187 197 10.1016/0008-6215(94)84085-7 1:CAS:528: DyaK2cXkt12itLs%3D (Pubitemid 24161735)
    • (1994) Carbohydrate Research , vol.258 , pp. 187-197
    • Natsume, M.1    Kamo, Y.2    Hirayama, M.3    Adachi, T.4
  • 19
    • 0002702320 scopus 로고    scopus 로고
    • Commercial applications of alginates
    • E Onsøyen 1996 Commercial applications of alginates Carbohydrates in Europe 14 26 31
    • (1996) Carbohydrates in Europe , vol.14 , pp. 26-31
    • Onsøyen, E.1
  • 20
    • 0019365279 scopus 로고
    • A general method for site-directed mutagenesis in prokaryotes
    • DOI 10.1038/289085a0
    • GB Ruvkun FM Ausubel 1981 A general method for site-directed mutagenesis in prokaryotes Nature 289 85 88 10.1038/289085a0 1:CAS:528:DyaL3MXitVGhsbg%3D (Pubitemid 11178462)
    • (1981) Nature , vol.289 , Issue.5793 , pp. 85-88
    • Ruvkun, G.B.1    Ausubel, F.M.2
  • 22
    • 0034838809 scopus 로고    scopus 로고
    • Cloning, sequence analysis and expression of Pseudoalteromonas elyakovii IAM 14594 gene (alyPEEC) encoding the extracellular alginate lyase
    • DOI 10.1016/S0008-6215(01)00198-7, PII S0008621501001987
    • T Sawabe H Takahashi Y Ezura P Gacesa 2001 Cloning, sequence analysis and expression of Pseudoalteromonas elyakovii IAM 14594 gene (alyPEEC) encoding the extracellular alginate lyase Carbohydr Res 335 11 21 10.1016/S0008-6215(01) 00198-7 1:CAS:528:DC%2BD3MXmslCku7Y%3D (Pubitemid 32830936)
    • (2001) Carbohydrate Research , vol.335 , Issue.1 , pp. 11-21
    • Sawabe, T.1    Takahashi, H.2    Ezura, Y.3    Gacesa, P.4
  • 23
    • 0029151950 scopus 로고
    • Polysaccharide lyases
    • 10.1111/j.1574-6976.1995.tb00179.x 1:CAS:528:DyaK2MXntFCrsb8%3D
    • IW Sutherland 1995 Polysaccharide lyases FEMS Microbiol Rev 16 323 347 10.1111/j.1574-6976.1995.tb00179.x 1:CAS:528:DyaK2MXntFCrsb8%3D
    • (1995) FEMS Microbiol Rev , vol.16 , pp. 323-347
    • Sutherland, I.W.1
  • 24
    • 85008069464 scopus 로고
    • Isolation of Laminaria-frond decomposing bacteria from japanese costal waters
    • M Uchida A Nakayama 1993 Isolation of Laminaria-frond decomposing bacteria from japanese costal waters Nippon Suisan Gakkaishi 59 1865 1871
    • (1993) Nippon Suisan Gakkaishi , vol.59 , pp. 1865-1871
    • Uchida, M.1    Nakayama, A.2
  • 25
    • 0036311047 scopus 로고    scopus 로고
    • Phylogenic analysis of three marine bacteria that have an ability to decompose Laminaria japonica
    • DOI 10.1046/j.1444-2906.2002.00481.x
    • M Uchida T Maeda T Shiba 2002 Phylogenic analysis of three marine bacteria that have an ability to decompose Laminaria japonica Fish Sci 68 703 705 10.1046/j.1444-2906.2002.00481.x 1:CAS:528:DC%2BD38Xlt1WitLc%3D (Pubitemid 34757754)
    • (2002) Fisheries Science , vol.68 , Issue.3 , pp. 703-705
    • Uchida, M.1    Maeda, T.2    Shiba, T.3
  • 26
    • 0033759340 scopus 로고    scopus 로고
    • Alginate lyase: Review of major sources and enzyme characteristics, structure-function analysis, biological roles, and applications
    • DOI 10.1146/annurev.micro.54.1.289
    • TY Wong LA Preston NL Schiller 2000 Alginate lyase: review of major sources and enzyme characteristics, structure-function analysis, biological roles, and applications Annu Rev Microbiol 54 289 340 10.1146/annurev.micro.54. 1.289 1:CAS:528:DC%2BD3cXotFWrs7k%3D (Pubitemid 30835913)
    • (2000) Annual Review of Microbiology , vol.54 , pp. 289-340
    • Thiang Yian Wong1    Preston, L.A.2    Schiller, N.L.3
  • 27
    • 0034084571 scopus 로고    scopus 로고
    • Overexpression in Escherichia coli, purification, and characterization of Sphingomonas sp. A1 alginate lyases
    • DOI 10.1006/prep.2000.1226
    • HJ Yoon W Hashimoto O Miyake M Okamoto B Mikami K Murata 2000 Overexpression in Escherichia coli, purification, and characterization of Sphingomonas sp. A1 alginate lyases Protein Expr Purif 19 84 90 10.1006/prep.2000.1226 1:CAS:528:DC%2BD3cXjs12gt7k%3D (Pubitemid 30387898)
    • (2000) Protein Expression and Purification , vol.19 , Issue.1 , pp. 84-90
    • Yoon, H.-J.1    Hashimoto, W.2    Miyake, O.3    Okamoto, M.4    Mikami, B.5    Murata, K.6
  • 28
    • 33645111220 scopus 로고    scopus 로고
    • Sequence analysis of alginate-derived oligosaccharides by negative-ion electrospray tandem mass spectrometry
    • 10.1016/j.jasms.2006.01.002
    • Z Zhang G Yu X Zhao H Liu H Guan AM Lawson W Chai 2006 Sequence analysis of alginate-derived oligosaccharides by negative-ion electrospray tandem mass spectrometry J Am Soc Mass Spectrom 17 621 630 10.1016/j.jasms.2006.01.002
    • (2006) J Am Soc Mass Spectrom , vol.17 , pp. 621-630
    • Zhang, Z.1    Yu, G.2    Zhao, X.3    Liu, H.4    Guan, H.5    Lawson, A.M.6    Chai, W.7


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