-
1
-
-
33750969711
-
Culture isolation and culture-independent clone libraries reveal new marine Synechococcus ecotypes with distinctive light and N physiologies
-
Ahlgren NA, Rocap G. (2006). Culture isolation and culture-independent clone libraries reveal new marine Synechococcus ecotypes with distinctive light and N physiologies. Appl Environ Microbiol 72: 7193-7204.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 7193-7204
-
-
Ahlgren, N.A.1
Rocap, G.2
-
2
-
-
0033890126
-
High-resolution atomic force microscopy studies of the escherichia coli outer membrane: Structural basis for permeability
-
Amro NA, Kotra LP, Wadu-Mesthrige K, Bulychev A, Mobashery S, Liu GY. (2000). High-resolution atomic force microscopy studies of the escherichia coli outer membrane: structural basis for permeability. Langmuir 16: 2789-2796.
-
(2000)
Langmuir
, vol.16
, pp. 2789-2796
-
-
Amro, N.A.1
Kotra, L.P.2
Wadu-Mesthrige, K.3
Bulychev, A.4
Mobashery, S.5
Liu, G.Y.6
-
3
-
-
34548718221
-
Microbial structuring of marine ecosystems
-
Azam F, Malfatti F. (2007). Microbial structuring of marine ecosystems. Nat Rev Microbiol 5: 782-791.
-
(2007)
Nat Rev Microbiol
, vol.5
, pp. 782-791
-
-
Azam, F.1
Malfatti, F.2
-
4
-
-
34249763808
-
Bacteria-organic matter coupling and its significance for oceanic carbon cycling
-
Azam F, Smith DC, Steward GF, Hagström Å. (1994). Bacteria-organic matter coupling and its significance for oceanic carbon cycling. Microb Ecol 28: 167-179.
-
(1994)
Microb Ecol
, vol.28
, pp. 167-179
-
-
Azam, F.1
Smith, D.C.2
Steward, G.F.3
Hagström, A.4
-
5
-
-
0012618901
-
Atomic force microscopy
-
Binning G, Quate CF. (1986). Atomic force microscopy. Phys Rev Lett 56: 930-933.
-
(1986)
Phys Rev Lett
, vol.56
, pp. 930-933
-
-
Binning, G.1
Quate, C.F.2
-
6
-
-
0036937956
-
Enumeration and biovolume determination of microbial cells - a methodological review and recommendations for applications in ecological research
-
Boelter M, Bloem J, Meiners K, Moller R. (2002). Enumeration and biovolume determination of microbial cells - a methodological review and recommendations for applications in ecological research. Biol Fertil Soils 36: 249-259.
-
(2002)
Biol Fertil Soils
, vol.36
, pp. 249-259
-
-
Boelter, M.1
Bloem, J.2
Meiners, K.3
Moller, R.4
-
7
-
-
34447327017
-
A comparative study of the cytometric characteristics of high and low nucleic-acid bacterioplankton cells from different aquatic ecosystems
-
Bouvier T, del Giorgio PA, Gasol JM. (2007). A comparative study of the cytometric characteristics of high and low nucleic-acid bacterioplankton cells from different aquatic ecosystems. Environ Microbiol 9: 2050-2066.
-
(2007)
Environ Microbiol
, vol.9
, pp. 2050-2066
-
-
Bouvier, T.1
del Giorgio, P.A.2
Gasol, J.M.3
-
8
-
-
0031983252
-
Atomic force microscopy: Application to investigation of Escherichia coli morphology before and after exposure to cefodizime
-
Braga PC, Ricci D. (1998). Atomic force microscopy: application to investigation of Escherichia coli morphology before and after exposure to cefodizime. Antimicrob Agents Chemother 42: 18-22.
-
(1998)
Antimicrob Agents Chemother
, vol.42
, pp. 18-22
-
-
Braga, P.C.1
Ricci, D.2
-
9
-
-
0021880980
-
Bacteria biovolume and biomass estimations
-
Bratbak G. (1985). Bacteria biovolume and biomass estimations. Appl Environ Microbiol 49: 1488-1493.
-
(1985)
Appl Environ Microbiol
, vol.49
, pp. 1488-1493
-
-
Bratbak, G.1
-
11
-
-
0034188337
-
Observation of changes in bacterial cell morphology using tapping mode atomic force microscopy
-
Camesano AT, Natan MJ, Logan BE. (2000). Observation of changes in bacterial cell morphology using tapping mode atomic force microscopy. Langmuir 16: 4563-4572.
-
(2000)
Langmuir
, vol.16
, pp. 4563-4572
-
-
Camesano, A.T.1
Natan, M.J.2
Logan, B.E.3
-
12
-
-
0033058076
-
Differential grazing and growth on Prochlorococcus and Synechococcus by two contrasting ciliates
-
Christaki U, Jacquet S, Dolan JR, Vaulot D, Rassoulzadegan F. (1999). Differential grazing and growth on Prochlorococcus and Synechococcus by two contrasting ciliates. Limnol Oceanogr 44: 52-61.
-
(1999)
Limnol Oceanogr
, vol.44
, pp. 52-61
-
-
Christaki, U.1
Jacquet, S.2
Dolan, J.R.3
Vaulot, D.4
Rassoulzadegan, F.5
-
13
-
-
22744439762
-
Grazing impact of different heterotrophic nanoflagellates on eukaryotic Ostreococcus tauri and prokaryotic picoautotrophs Prochlorococcus and Synechococcus
-
Christaki U, Vazquez-DomÍnguez E, Courties C, Lebaron P. (2005). Grazing impact of different heterotrophic nanoflagellates on eukaryotic Ostreococcus tauri and prokaryotic picoautotrophs Prochlorococcus and Synechococcus. Environ Microbiol 7: 1200-1210.
-
(2005)
Environ Microbiol
, vol.7
, pp. 1200-1210
-
-
Christaki, U.1
Vazquez-DomÍnguez, E.2
Courties, C.3
Lebaron, P.4
-
14
-
-
33644871766
-
Direct and indirect effects of protist predation on population size structure of a bacterial strain with high phenotypic plasticity
-
Corno G, Jurgens K. (2006). Direct and indirect effects of protist predation on population size structure of a bacterial strain with high phenotypic plasticity. Appl Environ Microbiol 72: 78-86.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 78-86
-
-
Corno, G.1
Jurgens, K.2
-
15
-
-
0035384605
-
Photophysical properties of fluorescent dna-dyes bound to single- and double-stranded dna in aqueous buffered solution
-
Cosa G, Focsaneanu KS, McLean JRN, McNamee JP, Scaiano JC. (2001). Photophysical properties of fluorescent dna-dyes bound to single- and double-stranded dna in aqueous buffered solution. Photochem Photobiol 73: 585-599.
-
(2001)
Photochem Photobiol
, vol.73
, pp. 585-599
-
-
Cosa, G.1
Focsaneanu, K.S.2
McLean, J.R.N.3
McNamee, J.P.4
Scaiano, J.C.5
-
17
-
-
84891283567
-
Physiological structure and single-cell activity in marine bacterioplankton
-
Kirchman DL ed, John Wiley & Sons Inc, Hoboken, NJ, pp
-
del Giorgio PA, Gasol JM. (2008). Physiological structure and single-cell activity in marine bacterioplankton. In: Kirchman DL (ed). Microbial Ecology of the Oceans. John Wiley & Sons Inc.: Hoboken, NJ, pp 243-298.
-
(2008)
Microbial Ecology of the Oceans
, pp. 243-298
-
-
del Giorgio, P.A.1
Gasol, J.M.2
-
18
-
-
77149171484
-
The global significance of respiration in aquatic ecosystems: From single cells to the biosphere
-
del Giorgio PA, Williams PJlB eds, Oxford University Press: New York, pp
-
del Giorgio PA, Williams PJlB (eds). (2005). The global significance of respiration in aquatic ecosystems: From single cells to the biosphere. In: Respiration in Aquatic Ecosystems. Oxford University Press: New York, pp 2667-2673.
-
(2005)
Respiration in Aquatic Ecosystems
, pp. 2667-2673
-
-
-
19
-
-
57349103282
-
Atomic force microscopy investigation of phage infection of bacteria
-
Dubrovin EV, Voloshin AG, Kraevsky SV, Ignatyuk TE, Abramchuk SS, Yaminsky IV et al. (2008). Atomic force microscopy investigation of phage infection of bacteria. Langmuir 24: 13068-13074.
-
(2008)
Langmuir
, vol.24
, pp. 13068-13074
-
-
Dubrovin, E.V.1
Voloshin, A.G.2
Kraevsky, S.V.3
Ignatyuk, T.E.4
Abramchuk, S.S.5
Yaminsky, I.V.6
-
20
-
-
0036783836
-
Atomic force microscopy, a powerful tool in microbiology
-
Dufrene YF. (2002). Atomic force microscopy, a powerful tool in microbiology. J Bacteriol 184: 5205-5213.
-
(2002)
J Bacteriol
, vol.184
, pp. 5205-5213
-
-
Dufrene, Y.F.1
-
21
-
-
50249167217
-
Atomic force microscopy and chemical force microscopy of microbial cells
-
Dufrene YF. (2008). Atomic force microscopy and chemical force microscopy of microbial cells. Nat Protoc 3: 1132-1138.
-
(2008)
Nat Protoc
, vol.3
, pp. 1132-1138
-
-
Dufrene, Y.F.1
-
22
-
-
40849116272
-
Evaluating the flow-cytometry nucleic acid double staining protocol in realistic situations of planktonic bacterial death
-
Falcioni T, Papa S, Gasol JM. (2008). Evaluating the flow-cytometry nucleic acid double staining protocol in realistic situations of planktonic bacterial death. Appl Environ Microbiol 74: 1767-1779.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 1767-1779
-
-
Falcioni, T.1
Papa, S.2
Gasol, J.M.3
-
23
-
-
0000016767
-
Influence of method on the apparent size distribution of bacterioplankton cell: Epifluorescence microscopy compared to scanning electron microscopy
-
Fuhrman JA. (1981). Influence of method on the apparent size distribution of bacterioplankton cell: epifluorescence microscopy compared to scanning electron microscopy. Mar Ecol Prog Ser 5: 103-106.
-
(1981)
Mar Ecol Prog Ser
, vol.5
, pp. 103-106
-
-
Fuhrman, J.A.1
-
24
-
-
0033542481
-
Marine viruses and their biogeochemical and ecological effects
-
Fuhrman JA. (1999). Marine viruses and their biogeochemical and ecological effects. Nature 399: 541-548.
-
(1999)
Nature
, vol.399
, pp. 541-548
-
-
Fuhrman, J.A.1
-
25
-
-
0018935706
-
Bacterioplankton secondary production estimates for coastal waters of British Columbia, Antarctica and California
-
Fuhrman JA, Azam F. (1980). Bacterioplankton secondary production estimates for coastal waters of British Columbia, Antarctica and California. Appl Environ Microbiol 39: 1085-1095.
-
(1980)
Appl Environ Microbiol
, vol.39
, pp. 1085-1095
-
-
Fuhrman, J.A.1
Azam, F.2
-
26
-
-
34250228655
-
Thymidine incorporation as a measure of heterotrophic bacterioplankton production in marine surface waters: Evaluation and field results
-
Fuhrman JA, Azam F. (1982). Thymidine incorporation as a measure of heterotrophic bacterioplankton production in marine surface waters: evaluation and field results. Mar Biol 66: 109-120.
-
(1982)
Mar Biol
, vol.66
, pp. 109-120
-
-
Fuhrman, J.A.1
Azam, F.2
-
27
-
-
0034107325
-
-
Garrison DL, Gowing MM, Hughes MP, Campbell L, Caron DA, Dennett MR et al. (2000). Microbial food web structure in the Arabian Sea: a US JGOFS study. Deep Sea Res Part 2 Top Stud Oceanogr 47: 1387-1422.
-
Garrison DL, Gowing MM, Hughes MP, Campbell L, Caron DA, Dennett MR et al. (2000). Microbial food web structure in the Arabian Sea: a US JGOFS study. Deep Sea Res Part 2 Top Stud Oceanogr 47: 1387-1422.
-
-
-
-
28
-
-
0036733384
-
Elemental C, N, and P cell content of individual bacteria collected at the Bermuda Atlantic Time-series Study (BATS) site
-
Gundersen K, Heldal M, Norland S, Purdie DA, Knap AH. (2002). Elemental C, N, and P cell content of individual bacteria collected at the Bermuda Atlantic Time-series Study (BATS) site. Limnol Oceanogr 47: 1525-1530.
-
(2002)
Limnol Oceanogr
, vol.47
, pp. 1525-1530
-
-
Gundersen, K.1
Heldal, M.2
Norland, S.3
Purdie, D.A.4
Knap, A.H.5
-
30
-
-
0029669531
-
Ultrastructure of marine snow. II. Microbiological considerations
-
Heissenberger A, Leppard G, Herndl G. (1996). Ultrastructure of marine snow. II. Microbiological considerations. Mar Ecol Prog Ser 135: 299-308.
-
(1996)
Mar Ecol Prog Ser
, vol.135
, pp. 299-308
-
-
Heissenberger, A.1
Leppard, G.2
Herndl, G.3
-
31
-
-
0036010832
-
Characterization of the adhesive mucilages secreted by live diatom cells using atomic force microscopy
-
Higgins MJ, Crawford SA, Mulvaney P, Wetherbee R. (2002). Characterization of the adhesive mucilages secreted by live diatom cells using atomic force microscopy. Protist 153: 25-38.
-
(2002)
Protist
, vol.153
, pp. 25-38
-
-
Higgins, M.J.1
Crawford, S.A.2
Mulvaney, P.3
Wetherbee, R.4
-
32
-
-
0017654644
-
Use of nuclepore filters for counting bacteria by fluorescence microscopy
-
Hobbie JE, Daley RJ, Jasper S. (1977). Use of nuclepore filters for counting bacteria by fluorescence microscopy. Appl Environ Microbiol 33: 1225-1228.
-
(1977)
Appl Environ Microbiol
, vol.33
, pp. 1225-1228
-
-
Hobbie, J.E.1
Daley, R.J.2
Jasper, S.3
-
33
-
-
84985201114
-
In-situ morphology and occurrence of eukaryotic phototrophs of bacterial size in the picoplankton of estuarine and oceanic waters
-
Johnson PW, Sieburth JM. (1982). In-situ morphology and occurrence of eukaryotic phototrophs of bacterial size in the picoplankton of estuarine and oceanic waters. J Phycol 18: 318-327.
-
(1982)
J Phycol
, vol.18
, pp. 318-327
-
-
Johnson, P.W.1
Sieburth, J.M.2
-
34
-
-
0011484473
-
Counting and sizing micro-organisms with the Coulter Counter
-
Kubitschek HE. (1969). Counting and sizing micro-organisms with the Coulter Counter. Methods Microbiol 1: 593-610.
-
(1969)
Methods Microbiol
, vol.1
, pp. 593-610
-
-
Kubitschek, H.E.1
-
35
-
-
0000819559
-
Relationships between biovolume and biomass of naturally derived marine bacterioplankton
-
Lee S, Fuhrman JA. (1987). Relationships between biovolume and biomass of naturally derived marine bacterioplankton. Appl Environ Microbiol 53: 1298-1303.
-
(1987)
Appl Environ Microbiol
, vol.53
, pp. 1298-1303
-
-
Lee, S.1
Fuhrman, J.A.2
-
36
-
-
77149128077
-
Atomic force microscopy reveals microscale networks and possible symbioses among pelagic marine bacteria
-
in press
-
Malfatti F, Azam F. (2009). Atomic force microscopy reveals microscale networks and possible symbioses among pelagic marine bacteria. Aquat Microb Ecol (in press).
-
(2009)
Aquat Microb Ecol
-
-
Malfatti, F.1
Azam, F.2
-
37
-
-
25844437587
-
Atomic force microscopy study on the effect of antimicrobial peptides on the cell envelope of Escherichia coli
-
Meincken M, Holroyd DL, Rautenbach M. (2005). Atomic force microscopy study on the effect of antimicrobial peptides on the cell envelope of Escherichia coli. Antimicrob Agents Chemother 49: 4085-4092.
-
(2005)
Antimicrob Agents Chemother
, vol.49
, pp. 4085-4092
-
-
Meincken, M.1
Holroyd, D.L.2
Rautenbach, M.3
-
38
-
-
51249174106
-
The influence of cell size on marine bacterial motility and energetics
-
Mitchell J. (1991). The influence of cell size on marine bacterial motility and energetics. Microb Ecol 22: 227-238.
-
(1991)
Microb Ecol
, vol.22
, pp. 227-238
-
-
Mitchell, J.1
-
39
-
-
39549101751
-
-
Nie CL, Yan Wei Y, Chen X, Liu YY, Dui W, Liu Y et al. (2007). Formaldehyde at low concentration induces protein tau into globular amyloid-like aggregates in vitro and in vivo. Plos ONE 2: e629.
-
Nie CL, Yan Wei Y, Chen X, Liu YY, Dui W, Liu Y et al. (2007). Formaldehyde at low concentration induces protein tau into globular amyloid-like aggregates in vitro and in vivo. Plos ONE 2: e629.
-
-
-
-
40
-
-
2942522395
-
Application of atomic force microscopy to observation of marine bacteria
-
Nishino T, Ikemoto E, Kazuhiro K. (2004). Application of atomic force microscopy to observation of marine bacteria. J Oceanogr 60: 219-225.
-
(2004)
J Oceanogr
, vol.60
, pp. 219-225
-
-
Nishino, T.1
Ikemoto, E.2
Kazuhiro, K.3
-
41
-
-
33748614882
-
Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment
-
Palenik B, Ren Q, Dupont CL, Myers GS, Heidelberg JF, Badger JH et al. (2006). Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment. Proc Natl Acad Sci 103: 13555-13559.
-
(2006)
Proc Natl Acad Sci
, vol.103
, pp. 13555-13559
-
-
Palenik, B.1
Ren, Q.2
Dupont, C.L.3
Myers, G.S.4
Heidelberg, J.F.5
Badger, J.H.6
-
43
-
-
0035839323
-
Precision of bacterioplankton biomass determination: A comparison of two fluorescent dyes, and of allometric and linear volume-to-carbon conversion factor
-
Posch T, Loferer-Kroessbacher M, Gao G, Alfreider A, Pernthaler J, Psenner R. (2001). Precision of bacterioplankton biomass determination: a comparison of two fluorescent dyes, and of allometric and linear volume-to-carbon conversion factor. Aquat Microb Ecol 25: 55-63.
-
(2001)
Aquat Microb Ecol
, vol.25
, pp. 55-63
-
-
Posch, T.1
Loferer-Kroessbacher, M.2
Gao, G.3
Alfreider, A.4
Pernthaler, J.5
Psenner, R.6
-
44
-
-
0031018616
-
Cell-specific respiratory activity of aquatic bacteria studied with the tetrazolium reduction method, cyto-clear slides, and image analysis
-
Posch T, Pernthaler J, Alfreider A, Psenner R. (1997). Cell-specific respiratory activity of aquatic bacteria studied with the tetrazolium reduction method, cyto-clear slides, and image analysis. Appl Environ Microbiol 63: 867-873.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 867-873
-
-
Posch, T.1
Pernthaler, J.2
Alfreider, A.3
Psenner, R.4
-
45
-
-
0025198355
-
Viral mortality of marine bacteria and cyanobacteria
-
Proctor LM, Fuhrman JA. (1990). Viral mortality of marine bacteria and cyanobacteria. Nature 343: 60-62.
-
(1990)
Nature
, vol.343
, pp. 60-62
-
-
Proctor, L.M.1
Fuhrman, J.A.2
-
48
-
-
0022053917
-
Detection, enumeration, and sizing of planktonic bacteria by image-analyzed epifluorescence microscopy
-
Sieracki ME, Johnson PW, Seiburth JM. (1985). Detection, enumeration, and sizing of planktonic bacteria by image-analyzed epifluorescence microscopy. Appl Environ Microbiol 49: 799-810.
-
(1985)
Appl Environ Microbiol
, vol.49
, pp. 799-810
-
-
Sieracki, M.E.1
Johnson, P.W.2
Seiburth, J.M.3
-
49
-
-
0026615105
-
Direct and indirect evidence of size-selective grazing on pelagic bacteria by freshwater nanoflagellates
-
Simek K, Chrzanowski TH. (1992). Direct and indirect evidence of size-selective grazing on pelagic bacteria by freshwater nanoflagellates. Appl Environ Microbiol 58: 3715-3720.
-
(1992)
Appl Environ Microbiol
, vol.58
, pp. 3715-3720
-
-
Simek, K.1
Chrzanowski, T.H.2
-
50
-
-
0001003553
-
Protein content and protein synthesis rates of planktonic bacteria
-
Simon M, Azam F. (1989). Protein content and protein synthesis rates of planktonic bacteria. Mar Ecol Prog Ser 51: 201-213.
-
(1989)
Mar Ecol Prog Ser
, vol.51
, pp. 201-213
-
-
Simon, M.1
Azam, F.2
-
51
-
-
0002878784
-
Estimation of virus production in the sea: I. Method development
-
Steward GF, Wikner J, Smith DC, Cochlan WP, Azam F. (1992). Estimation of virus production in the sea: I. Method development. Mar Microbial Food Webs 6: 57-78.
-
(1992)
Mar Microbial Food Webs
, vol.6
, pp. 57-78
-
-
Steward, G.F.1
Wikner, J.2
Smith, D.C.3
Cochlan, W.P.4
Azam, F.5
-
52
-
-
67149100875
-
Geographic and phylogenetic variation in bacterial biovolume using protein and nucleic acid staining
-
Straza TRA, Cottrell MT, Ducklow HW, Kirchman DL. (2009). Geographic and phylogenetic variation in bacterial biovolume using protein and nucleic acid staining. Appl Environ Microbiol 75: 4028-4034.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 4028-4034
-
-
Straza, T.R.A.1
Cottrell, M.T.2
Ducklow, H.W.3
Kirchman, D.L.4
-
53
-
-
0027332984
-
DAPI direct counting underestimates bacterial abundances and average cell size compared to AO direct counting
-
Suzuki MT, Sherr EB, Sherr BF. (1993). DAPI direct counting underestimates bacterial abundances and average cell size compared to AO direct counting. Limnol Oceanogr 38: 1566-1570.
-
(1993)
Limnol Oceanogr
, vol.38
, pp. 1566-1570
-
-
Suzuki, M.T.1
Sherr, E.B.2
Sherr, B.F.3
-
54
-
-
0026616315
-
Distribution of viruses in the Chesapeacke Bay
-
Wommack KE, Hill RT, Kesel M, Russek-Cohen E, Colwell R. (1992). Distribution of viruses in the Chesapeacke Bay. Appl Environ Microbiol 58: 2965-2970.
-
(1992)
Appl Environ Microbiol
, vol.58
, pp. 2965-2970
-
-
Wommack, K.E.1
Hill, R.T.2
Kesel, M.3
Russek-Cohen, E.4
Colwell, R.5
-
55
-
-
33846555782
-
Tip dilation and AFM capabilities in the characterization of nanoparticles
-
Wong C, West P, Olson K, Mecartney M, Starostina N. (2007). Tip dilation and AFM capabilities in the characterization of nanoparticles. JOM J Miner Met Mater Soc 59: 12-16.
-
(2007)
JOM J Miner Met Mater Soc
, vol.59
, pp. 12-16
-
-
Wong, C.1
West, P.2
Olson, K.3
Mecartney, M.4
Starostina, N.5
-
56
-
-
0028990019
-
Total counts of marine bacteria include a large fraction of non-nucleoid-containing bacteria (Ghosts)
-
Zweifel UL, Hagström A. (1995). Total counts of marine bacteria include a large fraction of non-nucleoid-containing bacteria (Ghosts). Appl Environ Microbiol 61: 2180-2185.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 2180-2185
-
-
Zweifel, U.L.1
Hagström, A.2
|