Erratum: Characterization of two proline dipeptidases (prolidases) from the hyperthermophilic archaeon Pyrococcus horikoshii (Applied Microbiology and Biotechnology (DOI: 10.1007/s00253-009-2235-x));Characterization of two proline dipeptidases (prolidases) from the hyperthermophilic archaeon Pyrococcus horikoshii

Applied Microbiology and Biotechnology

Volumn 86, Issue 1, 2010, Pages 177-188

  Theriot, Casey M ^a   Tove, Sherry R ^a   Grunden, Amy M ^a  

^a NORTH CAROLINA STATE UNIVERSITY   (United States)

Author keywords

Cobalt enzyme; Hyperthermophile; Metalloenzyme; Prolidase; Pyrococcus horikoshii

Indexed keywords

BIOTECHNOLOGY; CATALYST ACTIVITY; ESCHERICHIA COLI; METALS; PHOSPHORUS COMPOUNDS;

BIOCHEMICAL CHARACTERIZATION; BIOTECHNOLOGICAL APPLICATIONS; HYPERTHERMOPHILES; HYPERTHERMOPHILIC ARCHAEON; METALLOENZYMES; ORGANOPHOSPHORUS COMPOUNDS; PROLIDASE; PYROCOCCUS HORIKOSHII;

ENZYMES;

PROLINE DIPEPTIDASE;

AMINO ACID; BIOTECHNOLOGY; ENZYME; GENOME; HYDROLYSIS; METAL BINDING; THERMOPHILIC BACTERIUM;

ARTICLE; BACTERIAL GENE; BINDING AFFINITY; CATALYSIS; CHEMICAL ANALYSIS; ENZYME ACTIVITY; ENZYME ANALYSIS; ENZYME SPECIFICITY; ENZYME STABILITY; ESCHERICHIA COLI; GENE IDENTIFICATION; HYPERTHERMOPHILIC ARCHAEON; METAL BINDING; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PROTEIN EXPRESSION; PYROCOCCUS FURIOSUS; PYROCOCCUS HORIKOSHII; SEQUENCE ANALYSIS;

ARCHAEA; ESCHERICHIA COLI; PYROCOCCUS FURIOSUS; PYROCOCCUS HORIKOSHII;

EID: 77149166621     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-009-2300-5     Document Type: Erratum

References (38)

1. MW Adams 1993 Enzymes and proteins from organisms that grow near and above 100 degrees C Annu Rev Microbiol 47 627 658 1:CAS:528:DyaK2cXktVyr
2. R Besio S Alleva A Forlino A Lupi C Meneghini V Minicozzi A Profumo F Stellato R Tenni S Morante 2009 Identifying the structure of the active sites of human recombinant prolidase Eur Biophys J 10.1007/s00249-009-0459-4
3. W Bockelmann 1995 The proteolytic system of starter and non-starter bacteria: components and their importance for cheese ripening Int Dairy J 5 977 994 10.1016/0958-6946(95)00041-0 1:CAS:528:DyaK28Xht1Clur8%3D
4. SC Chai WL Wang QZ Ye 2008 FE(II) is the native cofactor for Escherichia coli methionine aminopeptidase J Biol Chem 283 26879 26885 10.1074/jbc. M804345200 1:CAS:528:DC%2BD1cXhtFKhu7nN
5. Cheng TC, DeFrank JJ (2000) Hydrolysis of organophosphorus compounds by bacterial prolidases. In: Zwanenburg B, Mikolajczyk M, Kielbasinski P (ed) Enzymes in action green solutions for chemical problems, Vol 33. Kluwer Academic Publishers, Dordrecht, pp 243-261
6. TC Cheng VK Rastogi JJ DeFrank GP Sawiris 1998 G-type nerve agent decontamination by Alteromonas prolidase Ann N Y Acad Sci 864 253 258 10.1111/j.1749-6632.1998.tb10316.x 1:CAS:528:DyaK1MXmslOmtA%3D%3D (Pubitemid 29048124)
7. TC Cheng JJ DeFrank VK Rastogi 1999 Alteromonas prolidase for organophosphorus G-agent decontamination Chem Biol Interact 119-120 455 462 10.1016/S0009-2797(99)00058-7 (Pubitemid 29278583)
8. AJ Copik S Waterson SI Swierczek B Bennett RC Holz 2005 Both nucleophile and substrate bind to the catalytic Fe(II)-center in the type-II methionyl aminopeptidase from Pyrococcus furiosus Inorg Chem 44 1160 1162 10.1021/ic0487934 1:CAS:528:DC%2BD2MXhtVSntL8%3D (Pubitemid 40333431)
9. NJ Cosper VM D'Souza RA Scott RC Holz 2001 Structural evidence that the methionyl aminopeptidase from Escherichia coli is a mononuclear metalloprotease Biochemistry 40 13302 13309 10.1021/bi010837m 1:CAS:528:DC%2BD3MXnsFagt7o%3D (Pubitemid 33043546)
10. DF Cunningham B O'Connor 1997 Proline specific peptidases Biochim Biophys Acta 1343 160 186 1:CAS:528:DyaK2sXnvVSnsro%3D
11. VM D'Souza RC Holz 1999 The methionyl aminopeptidase from Escherichia coli can function as an iron(II) enzyme Biochemistry 38 11079 11085 10.1021/bi990872h (Pubitemid 29411598)
12. VM D'Souza B Bennett AJ Copik RC Holz 2000 Divalent metal binding properties of the methionyl aminopeptidase from Escherichia coli Biochemistry 39 3817 3826 10.1021/bi9925827 (Pubitemid 30183864)
13. VM D'Souza SI Swierczek NJ Cosper L Meng S Ruebush AJ Copik RA Scott RC Holz 2002 Kinetic and structural characterization of manganese(II)-loaded methionyl aminopeptidases Biochemistry 41 13096 13105 10.1021/bi020395u (Pubitemid 35215795)
14. X Du S Tove K Kast-Hutcheson AM Grunden 2005 Characterization of the dinuclear metal center of Pyrococcus furiosus prolidase by analysis of targeted mutants FEBS Lett 579 6140 6146 10.1016/j.febslet.2005.09.086 1:CAS:528:DC%2BD2MXhtFyktr3L (Pubitemid 41546261)
15. F Endo A Tanoue H Nakai A Hata Y Indo K Titani I Matsuda 1989 Primary structure and gene localization of human prolidase J Biol Chem 264 4476 4481 1:CAS:528:DyaK3cXhslSksw%3D%3D
16. MD Fernandez-Espla MC Martin-Hernandez PF Fox 1997 Purification and characterization of a prolidase from Lactobacillus casei subsp. casei IFPL 731 Appl Environ Microbiol 63 314 316 1:CAS:528:DyaK2sXhs1Ogug%3D%3D
17. G Fiala KO Stetter 1986 Pyrococcus furiosus sp. nov. represents a novel genus of marine heterotrophic archaebacteria growing optimally at 100 °C Arch Microbiol 145 56 61 10.1007/BF00413027 1:CAS:528:DyaL28XksFOrtr4%3D
18. A Forlino A Lupi P Vaghi A Icaro Cornaglia A Calligaro E Campari G Cetta 2002 Mutation analysis of five new patients affected by prolidase deficiency: the lack of enzyme activity causes necrosis-like cell death in cultured fibroblasts Hum Genet 111 314 322 10.1007/s00439-002-0792-5 1:CAS:528: DC%2BD3sXitV2q (Pubitemid 36075057)
19. M Ghosh AM Grunden DM Dunn R Weiss MW Adams 1998 Characterization of native and recombinant forms of an unusual cobalt-dependent proline dipeptidase (prolidase) from the hyperthermophilic archaeon Pyrococcus furiosus J Bacteriol 180 4781 4789 1:CAS:528:DyaK1cXmt1Sgu7c%3D
20. JM Gonzalez Y Masuchi FT Robb JW Ammerman DL Maeder M Yanagibayashi J Tamaoka C Kato 1998 Pyrococcus horikoshii sp. nov. a hyperthermophilic archaeon isolated from a hydrothermal vent at the Okinawa Trough Extremophiles 2 123 130 10.1007/s007920050051 1:STN:280:DyaK1czjs1Gmug%3D%3D (Pubitemid 28273416)
21. AM Grunden M Ghosh MW Adams 2001 Proline dipeptidase from Pyrococcus furiosus Methods Enzymol 330 433 445 10.1016/S0076-6879(01)30395-6 1:CAS:528:DC%2BD3MXht1Grtr4%3D (Pubitemid 32107549)
22. O Lecompte R Ripp V Puzos-Barbe S Duprat R Heilig J Dietrich JC Thierry O Poch 2001 Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea Genome Res 11 981 993 10.1101/gr.GR1653R 1:CAS:528:DC%2BD3MXkt12ruro%3D (Pubitemid 32834544)
23. P Ledoux CR Scriver P Hechtman 1996 Expression and molecular analysis of mutations in prolidase deficiency Am J Hum Genet 59 1035 1039 1:CAS:528:DyaK28XmvFyksrc%3D
24. WT Lowther BW Matthews 2002 Metalloaminopeptidases: common functional themes in disparate structural surroundings Chem Rev 102 4581 4608 10.1021/cr0101757 1:CAS:528:DC%2BD38XosFSgu7c%3D
25. A Lupi S Della Torre E Campari R Tenni G Cetta A Rossi A Forlino 2006 Human recombinant prolidase from eukaryotic and prokaryotic sources. Expression, purification, characterization and long-term stability studies FEBS J 273 5466 5478 10.1111/j.1742-4658.2006.05538.x 1:CAS:528:DC%2BD2sXjvVCn (Pubitemid 44772402)
26. DL Maeder RB Weiss DM Dunn JL Cherry JM Gonzalez J DiRuggiero FT Robb 1999 Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences Genetics 152 1299 1305 1:CAS:528:DyaK1MXlslSrtro%3D
27. MJ Maher M Ghosh AM Grunden AL Menon MW Adams HC Freeman JM Guss 2004 Structure of the prolidase from Pyrococcus furiosus Biochemistry 43 2771 2783 10.1021/bi0356451 1:CAS:528:DC%2BD2cXht1Wiur4%3D (Pubitemid 38327808)
28. L Meng S Ruebush VM D'Souza AJ Copik S Tsunasawa RC Holz 2002 Overexpression and divalent metal binding properties of the methionyl aminopeptidase from Pyrococcus furiosus Biochemistry 41 7199 7208 10.1021/bi020138p 1:CAS:528:DC%2BD38Xjs1aks7w%3D (Pubitemid 34602435)
29. S Mittal X Song BS Vig CP Landowski I Kim JM Hilfinger GL Amidon 2005 Prolidase, a potential enzyme target for melanoma: design of proline-containing dipeptide-like prodrugs Mol Pharmacol 2 37 46 10.1021/mp049922p 1:CAS:528:DC%2BD2MXmsVSrtg%3D%3D (Pubitemid 40314728)
30. S Mittal X Song BS Vig GL Amidon 2007 Proline prodrug of melphalan targeted to prolidase, a prodrug activating enzyme overexpressed in melanoma Pharm Res 24 1290 1298 10.1007/s11095-007-9249-9 1:CAS:528:DC%2BD2sXnt1Cksr0%3D (Pubitemid 46870594)
31. GJ Schut SD Brehm S Datta MW Adams 2003 Whole-genome DNA microarray analysis of a hyperthermophile and an archaeon: Pyrococcus furiosus grown on carbohydrates or peptides J Bacteriol 185 3935 3947 10.1128/JB.185.13.3935-3947. 2003 1:CAS:528:DC%2BD3sXltFems7Y%3D (Pubitemid 36735945)
32. FW Studier 2005 Protein production by auto-induction in high density shaking cultures Protein Expr Purif 41 207 234 10.1016/j.pep.2005.01.016 1:CAS:528:DC%2BD2MXjsFCktLw%3D
33. K Suga T Kabashima K Ito D Tsuru H Okamura J Kataoka T Yoshimoto 1995 Prolidase from Xanthomonas maltophilia: purification and characterization of the enzyme Biosci Biotechnol Biochem 59 2087 2090 10.1271/bbb.59.2087 1:CAS:528:DyaK2MXpslyhsL0%3D
34. Theriot CM, Tove SR, Grunden AM (2009) Biotechnological applications of recombinant microbial prolidases. In: Laskin A, Gadd G, Sariaslani S (ed) Advances in applied microbiology, Vol 68. Academic Press, New York, pp 99-132
35. 2+ as a cofactor: a case of mistaken identity? Protein Sci 7 2684 2687 10.1002/pro.5560071224 1:CAS:528:DyaK1MXitVKk
36. K Willingham MJ Maher AM Grunden M Ghosh MW Adams HC Freeman JM Guss 2001 Crystallization and characterization of the prolidase from Pyrococcus furiosus Acta Crystallogr D Biol Crystallogr 57 428 430 10.1107/S0907444900020187 1:STN:280:DC%2BD3M3lvVyltg%3D%3D (Pubitemid 32203179)
37. SI Yang T Tanaka 2008 Characterization of recombinant prolidase from Lactococcus lactis-changes in substrate specificity by metal cations, and allosteric behavior of the peptidase FEBS J 275 271 280 10.1111/j.1742-4658. 2008.06344.x 1:CAS:528:DC%2BD1cXhtFejtrY%3D
38. QZ Ye SX Xie ZQ Ma M Huang RP Hanzlik 2006 Structural basis of catalysis by monometalated methionine aminopeptidase Proc Natl Acad Sci USA 103 9470 9475 10.1073/pnas.0602433103 1:CAS:528:DC%2BD28XmsVOnsro%3D (Pubitemid 43955849)