-
1
-
-
57749198900
-
Trypanosomes as a model to investigate mRNA decay pathways
-
Archer, S., Queiroz, R., Stewart, M. and Clayton, C. (2008). Trypanosomes as a model to investigate mRNA decay pathways. Methods Enzymol. 448, 359-377.
-
(2008)
Methods Enzymol
, vol.448
, pp. 359-377
-
-
Archer, S.1
Queiroz, R.2
Stewart, M.3
Clayton, C.4
-
2
-
-
66049158810
-
Polysomes, P bodies and stress granules: States and fates of eukaryotic mRNAs
-
Balagopal, V. and Parker, R. (2009). Polysomes, P bodies and stress granules: states and fates of eukaryotic mRNAs. Curr. Opin. Cell Biol. 21, 403-408.
-
(2009)
Curr. Opin. Cell Biol
, vol.21
, pp. 403-408
-
-
Balagopal, V.1
Parker, R.2
-
3
-
-
0027275067
-
Molecular cloning and cellular localization of a BiP homologue in Trypanosoma brucei. Divergent ER retention signals in a lower eukaryote
-
Bangs, J. D., Uyetake, L., Brickman, M. J., Balber, A. E. and Boothroyd, J. C. (1993). Molecular cloning and cellular localization of a BiP homologue in Trypanosoma brucei. Divergent ER retention signals in a lower eukaryote. J. Cell Sci. 105, 1101-1113.
-
(1993)
J. Cell Sci
, vol.105
, pp. 1101-1113
-
-
Bangs, J.D.1
Uyetake, L.2
Brickman, M.J.3
Balber, A.E.4
Boothroyd, J.C.5
-
4
-
-
34250677751
-
Stress-induced reversal of microRNA repression and mRNA P-body localization in human cells
-
Bhattacharyya, S. N., Habermacher, R., Martine, U., Closs, E. I. and Filipowicz, W. (2006). Stress-induced reversal of microRNA repression and mRNA P-body localization in human cells. Cold Spring Harb. Symp. Quant. Biol. 71, 513-521.
-
(2006)
Cold Spring Harb. Symp. Quant. Biol
, vol.71
, pp. 513-521
-
-
Bhattacharyya, S.N.1
Habermacher, R.2
Martine, U.3
Closs, E.I.4
Filipowicz, W.5
-
5
-
-
0029113981
-
The 3′-untranslated regions from the Trypanosoma brucei phosphoglycerate kinase-encoding genes mediate developmental regulation
-
Blattner, J. and Clayton, C. E. (1995). The 3′-untranslated regions from the Trypanosoma brucei phosphoglycerate kinase-encoding genes mediate developmental regulation. Gene 162, 153-156.
-
(1995)
Gene
, vol.162
, pp. 153-156
-
-
Blattner, J.1
Clayton, C.E.2
-
6
-
-
49749095109
-
Protection of specific maternal messenger RNAs by the P body protein CGH-1 (Dhh1/RCK) during Caenorhabditis elegans oogenesis
-
Boag, P. R., Atalay, A., Robida, S., Reinke, V. and Blackwell, T. K. (2008). Protection of specific maternal messenger RNAs by the P body protein CGH-1 (Dhh1/RCK) during Caenorhabditis elegans oogenesis. J. Cell Biol. 182, 543-557.
-
(2008)
J. Cell Biol
, vol.182
, pp. 543-557
-
-
Boag, P.R.1
Atalay, A.2
Robida, S.3
Reinke, V.4
Blackwell, T.K.5
-
7
-
-
12344306524
-
The transcriptomes of Trypanosoma brucei Lister 427 and TREU927 bloodstream and procyclic trypomastigotes
-
Brems, S., Guilbride, D. L., Gundlesdodjir-Planck, D., Busold, C., Luu, V. D., Schanne, M., Hoheisel, J. and Clayton, C. (2005). The transcriptomes of Trypanosoma brucei Lister 427 and TREU927 bloodstream and procyclic trypomastigotes. Mol. Biochem. Parasitol. 139, 163-172.
-
(2005)
Mol. Biochem. Parasitol
, vol.139
, pp. 163-172
-
-
Brems, S.1
Guilbride, D.L.2
Gundlesdodjir-Planck, D.3
Busold, C.4
Luu, V.D.5
Schanne, M.6
Hoheisel, J.7
Clayton, C.8
-
8
-
-
27144515901
-
Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies
-
Brengues, M., Teixeira, D. and Parker, R. (2005). Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies. Science 310, 486-489.
-
(2005)
Science
, vol.310
, pp. 486-489
-
-
Brengues, M.1
Teixeira, D.2
Parker, R.3
-
9
-
-
0018601361
-
Cultivation and in vitro cloning or procyclic culture forms of Trypanosoma brucei in a semi-defined medium. Short communication
-
Brun, R. and Schonenberger. (1979). Cultivation and in vitro cloning or procyclic culture forms of Trypanosoma brucei in a semi-defined medium. Short communication. Acta Trop. 36, 289-292.
-
(1979)
Acta Trop
, vol.36
, pp. 289-292
-
-
Brun, R.1
Schonenberger2
-
10
-
-
58149503706
-
DEAD-box proteins can completely separate an RNA duplex using a single ATP
-
Chen, Y., Potratz, J. P., Tijerina, P., Del Campo, M., Lambowitz, A. M. and Russell, R. (2008). DEAD-box proteins can completely separate an RNA duplex using a single ATP. Proc. Natl. Acad. Sci. USA 105, 20203-20208.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 20203-20208
-
-
Chen, Y.1
Potratz, J.P.2
Tijerina, P.3
Del Campo, M.4
Lambowitz, A.M.5
Russell, R.6
-
11
-
-
23644449094
-
Crystal structure and functional analysis of DEAD-box protein Dhh1p
-
Cheng, Z., Coller, J., Parker, R. and Song, H. (2005). Crystal structure and functional analysis of DEAD-box protein Dhh1p. RNA 11, 1258-1270.
-
(2005)
RNA
, vol.11
, pp. 1258-1270
-
-
Cheng, Z.1
Coller, J.2
Parker, R.3
Song, H.4
-
12
-
-
35349012982
-
Post-transcriptional regulation of gene expression in trypanosomes and leishmanias
-
Clayton, C. and Shapira, M. (2007). Post-transcriptional regulation of gene expression in trypanosomes and leishmanias. Mol. Biochem. Parasitol. 156, 93-101.
-
(2007)
Mol. Biochem. Parasitol
, vol.156
, pp. 93-101
-
-
Clayton, C.1
Shapira, M.2
-
13
-
-
3943051423
-
Eukaryotic mRNA decapping
-
Coller, J. and Parker, R. (2004). Eukaryotic mRNA decapping. Annu. Rev. Biochem. 73, 861-890.
-
(2004)
Annu. Rev. Biochem
, vol.73
, pp. 861-890
-
-
Coller, J.1
Parker, R.2
-
14
-
-
25144482816
-
General translational repression by activators of mRNA decapping
-
Coller, J. and Parker, R. (2005). General translational repression by activators of mRNA decapping. Cell 122, 875-886.
-
(2005)
Cell
, vol.122
, pp. 875-886
-
-
Coller, J.1
Parker, R.2
-
15
-
-
0035674477
-
The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes
-
Coller, J. M., Tucker, M., Sheth, U., Valencia-Sanchez, M. A. and Parker, R. (2001). The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes. RNA 7, 1717-1727.
-
(2001)
RNA
, vol.7
, pp. 1717-1727
-
-
Coller, J.M.1
Tucker, M.2
Sheth, U.3
Valencia-Sanchez, M.A.4
Parker, R.5
-
16
-
-
2442566370
-
Cytoplasmic foci are sites of mRNA decay in human cells
-
Cougot, N., Babajko, S. and Seraphin, B. (2004). Cytoplasmic foci are sites of mRNA decay in human cells. J. Cell Biol. 165, 31-40.
-
(2004)
J. Cell Biol
, vol.165
, pp. 31-40
-
-
Cougot, N.1
Babajko, S.2
Seraphin, B.3
-
17
-
-
43749118714
-
-
Dallagiovanna, B., Correa, A., Probst, C. M., Holetz, F., Smircich, P., de Aguiar, A. M., Mansur, F., da, Silva, C. V., Mortara, R. A., Garat, B. et al. (2007). Functional genomic characterization of mRNAs associated with TcPUF6, a pumilio-like protein from Trypanosoma cruzi. J. Biol. Chem. 283, 8266-8273.
-
Dallagiovanna, B., Correa, A., Probst, C. M., Holetz, F., Smircich, P., de Aguiar, A. M., Mansur, F., da, Silva, C. V., Mortara, R. A., Garat, B. et al. (2007). Functional genomic characterization of mRNAs associated with TcPUF6, a pumilio-like protein from Trypanosoma cruzi. J. Biol. Chem. 283, 8266-8273.
-
-
-
-
18
-
-
33846068920
-
A single subunit, Dis3, is essentially responsible for yeast exosome core activity
-
Dziembowski, A., Lorentzen, E., Conti, E. and Seraphin, B. (2007). A single subunit, Dis3, is essentially responsible for yeast exosome core activity. Nat. Struct. Mol. Biol. 14, 15-22.
-
(2007)
Nat. Struct. Mol. Biol
, vol.14
, pp. 15-22
-
-
Dziembowski, A.1
Lorentzen, E.2
Conti, E.3
Seraphin, B.4
-
19
-
-
8644219648
-
Cold shock and regulation of surface protein trafficking convey sensitization to inducers of stage differentiation in Trypanosoma brucei
-
Engstler, M. and Boshart, M. (2004). Cold shock and regulation of surface protein trafficking convey sensitization to inducers of stage differentiation in Trypanosoma brucei. Genes Dev. 18, 2798-2811.
-
(2004)
Genes Dev
, vol.18
, pp. 2798-2811
-
-
Engstler, M.1
Boshart, M.2
-
20
-
-
49249093497
-
The RNA-binding protein TbDRBD3 regulates the stability of a specific subset of mRNAs in trypanosomes
-
Estevez, A. M. (2008). The RNA-binding protein TbDRBD3 regulates the stability of a specific subset of mRNAs in trypanosomes. Nucleic Acids Res. 36, 4573-4586.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 4573-4586
-
-
Estevez, A.M.1
-
21
-
-
34347335707
-
P-body formation is a consequence, not the cause, of RNA-mediated gene silencing
-
Eulalio, A., Behm-Ansmant, I., Schweizer, D. and Izaurralde, E. (2007). P-body formation is a consequence, not the cause, of RNA-mediated gene silencing. Mol. Cell. Biol. 27, 3970-3981.
-
(2007)
Mol. Cell. Biol
, vol.27
, pp. 3970-3981
-
-
Eulalio, A.1
Behm-Ansmant, I.2
Schweizer, D.3
Izaurralde, E.4
-
22
-
-
0037013898
-
The DEAD box protein Dhh1 stimulates the decapping enzyme Dcp1
-
Fischer, N. and Weis, K. (2002). The DEAD box protein Dhh1 stimulates the decapping enzyme Dcp1. EMBO J. 21, 2788-2797.
-
(2002)
EMBO J
, vol.21
, pp. 2788-2797
-
-
Fischer, N.1
Weis, K.2
-
23
-
-
56849103665
-
The control of mRNA decapping and Pbody formation
-
Franks, T. M. and Lykke-Andersen, J. (2008). The control of mRNA decapping and Pbody formation. Mol. Cell 32, 605-615.
-
(2008)
Mol. Cell
, vol.32
, pp. 605-615
-
-
Franks, T.M.1
Lykke-Andersen, J.2
-
24
-
-
1842417078
-
Elements in the 3′ untranslated region of procyclin mRNA regulate expression in insect forms of Trypanosoma brucei by modulating RNA stability and translation
-
Furger, A., Schurch, N., Kurath, U. and Roditi, I. (1997). Elements in the 3′ untranslated region of procyclin mRNA regulate expression in insect forms of Trypanosoma brucei by modulating RNA stability and translation. Mol. Cell. Biol. 17, 4372-4380.
-
(1997)
Mol. Cell. Biol
, vol.17
, pp. 4372-4380
-
-
Furger, A.1
Schurch, N.2
Kurath, U.3
Roditi, I.4
-
25
-
-
0031678684
-
Modifications of the 5′ cap of mRNAs during Xenopus oocyte maturation: Independence from changes in poly(A) length and impact on translation
-
Gillian-Daniel, D. L., Gray, N. K., Astrom, J., Barkoff, A. and Wickens, M. (1998). Modifications of the 5′ cap of mRNAs during Xenopus oocyte maturation: independence from changes in poly(A) length and impact on translation. Mol. Cell. Biol. 18, 6152-6163.
-
(1998)
Mol. Cell. Biol
, vol.18
, pp. 6152-6163
-
-
Gillian-Daniel, D.L.1
Gray, N.K.2
Astrom, J.3
Barkoff, A.4
Wickens, M.5
-
26
-
-
18844462890
-
RNA polymerase I transcribes procyclin genes and variant surface glycoprotein gene expression sites in Trypanosoma brucei
-
Gunzl, A., Bruderer, T., Laufer, G., Schimanski, B., Tu, L. C., Chung, H. M., Lee, P. T. and Lee, M. G. (2003). RNA polymerase I transcribes procyclin genes and variant surface glycoprotein gene expression sites in Trypanosoma brucei. Eukaryot. Cell 2, 542-551.
-
(2003)
Eukaryot. Cell
, vol.2
, pp. 542-551
-
-
Gunzl, A.1
Bruderer, T.2
Laufer, G.3
Schimanski, B.4
Tu, L.C.5
Chung, H.M.6
Lee, P.T.7
Lee, M.G.8
-
27
-
-
41449099992
-
Control and regulation of gene expression: Quantitative analysis of the expression of phosphoglycerate kinase in bloodstream form Trypanosoma brucei
-
Haanstra, J. R., Stewart, M., Luu, V. D., van Tuijl, A., Westerhoff, H. V., Clayton, C. and Bakker, B. M. (2008). Control and regulation of gene expression: quantitative analysis of the expression of phosphoglycerate kinase in bloodstream form Trypanosoma brucei. J. Biol. Chem. 283, 2495-2507.
-
(2008)
J. Biol. Chem
, vol.283
, pp. 2495-2507
-
-
Haanstra, J.R.1
Stewart, M.2
Luu, V.D.3
van Tuijl, A.4
Westerhoff, H.V.5
Clayton, C.6
Bakker, B.M.7
-
28
-
-
36549005184
-
Developmental regulation of gene expression in trypanosomatid parasitic protozoa
-
Haile, S. and Papadopoulou, B. (2007). Developmental regulation of gene expression in trypanosomatid parasitic protozoa. Curr. Opin. Microbiol. 10, 569-577.
-
(2007)
Curr. Opin. Microbiol
, vol.10
, pp. 569-577
-
-
Haile, S.1
Papadopoulou, B.2
-
29
-
-
0028053101
-
A conserved stem-loop structure in the 3′ untranslated region of procyclin mRNAs regulates expression in Trypanosoma brucei
-
Hehl, A., Vassella, E., Braun, R. and Roditi, I. (1994). A conserved stem-loop structure in the 3′ untranslated region of procyclin mRNAs regulates expression in Trypanosoma brucei. Proc. Natl. Acad. Sci. USA 91, 370-374.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 370-374
-
-
Hehl, A.1
Vassella, E.2
Braun, R.3
Roditi, I.4
-
30
-
-
0028009258
-
Axenic culture of African trypanosome bloodstream forms
-
Hirumi, H. and Hirumi, K. (1994). Axenic culture of African trypanosome bloodstream forms. Parasitol. Today 10, 80-84.
-
(1994)
Parasitol. Today
, vol.10
, pp. 80-84
-
-
Hirumi, H.1
Hirumi, K.2
-
31
-
-
34047148374
-
Evidence of P-body-like structures in Trypanosoma cruzi
-
Holetz, F. B., Correa, A., Avila, A. R., Nakamura, C. V., Krieger, M. A. and Goldenberg, S. (2007). Evidence of P-body-like structures in Trypanosoma cruzi. Biochem. Biophys. Res. Commun. 356, 1062-1067.
-
(2007)
Biochem. Biophys. Res. Commun
, vol.356
, pp. 1062-1067
-
-
Holetz, F.B.1
Correa, A.2
Avila, A.R.3
Nakamura, C.V.4
Krieger, M.A.5
Goldenberg, S.6
-
32
-
-
0023663089
-
The anatomy and transcription of a telomeric expression site for variant specific surface antigens in Trypanosoma brucei
-
Kooter, J. M., Van der Spek, H. J., Wagter, R., d'Oliviera, C. E., Van der Hoeven, F., Johnson, P. J. and Borst, P. (1987). The anatomy and transcription of a telomeric expression site for variant specific surface antigens in Trypanosoma brucei. Cell 51, 261-272.
-
(1987)
Cell
, vol.51
, pp. 261-272
-
-
Kooter, J.M.1
Van der Spek, H.J.2
Wagter, R.3
d'Oliviera, C.E.4
Van der Hoeven, F.5
Johnson, P.J.6
Borst, P.7
-
33
-
-
55049098755
-
Heat shock causes a decrease in polysomes and the appearance of stress granules in trypanosomes independently of eIF2(alpha) phosphorylation at Thr169
-
Kramer, S., Queiroz, R., Ellis, L., Webb, H., Hoheisel, J. D., Clayton, C. and Carrington, M. (2008). Heat shock causes a decrease in polysomes and the appearance of stress granules in trypanosomes independently of eIF2(alpha) phosphorylation at Thr169. J. Cell Sci. 121, 3002-3014.
-
(2008)
J. Cell Sci
, vol.121
, pp. 3002-3014
-
-
Kramer, S.1
Queiroz, R.2
Ellis, L.3
Webb, H.4
Hoheisel, J.D.5
Clayton, C.6
Carrington, M.7
-
34
-
-
0033768371
-
Double-stranded RNA interference in Trypanosoma brucei using head-to-head promoters
-
LaCount, D. J., Bruse, S., Hill, K. L. and Donelson, J. E. (2000). Double-stranded RNA interference in Trypanosoma brucei using head-to-head promoters. Mol. Biochem. Parasitol. 111, 67-76.
-
(2000)
Mol. Biochem. Parasitol
, vol.111
, pp. 67-76
-
-
LaCount, D.J.1
Bruse, S.2
Hill, K.L.3
Donelson, J.E.4
-
35
-
-
0030791405
-
Xp54, the Xenopus homologue of human RNA helicase p54, is an integral component of stored mRNP particles in oocytes
-
Ladomery, M., Wade, E. and Sommerville, J. (1997). Xp54, the Xenopus homologue of human RNA helicase p54, is an integral component of stored mRNP particles in oocytes. Nucleic Acids Res. 25, 965-973.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 965-973
-
-
Ladomery, M.1
Wade, E.2
Sommerville, J.3
-
36
-
-
0033055772
-
The cis acting sequences responsible for the differential decay of the unstable MFA2 and stable PGK1 transcripts in yeast include the context of the translational start codon
-
LaGrandeur, T. and Parker, R. (1999). The cis acting sequences responsible for the differential decay of the unstable MFA2 and stable PGK1 transcripts in yeast include the context of the translational start codon. RNA 5, 420-433.
-
(1999)
RNA
, vol.5
, pp. 420-433
-
-
LaGrandeur, T.1
Parker, R.2
-
37
-
-
0027193605
-
Coupling of poly(A) site selection and trans-splicing in Leishmania
-
LeBowitz, J. H., Smith, H. Q., Rusche, L. and Beverley, S. M. (1993). Coupling of poly(A) site selection and trans-splicing in Leishmania. Genes Dev. 7, 996-1007.
-
(1993)
Genes Dev
, vol.7
, pp. 996-1007
-
-
LeBowitz, J.H.1
Smith, H.Q.2
Rusche, L.3
Beverley, S.M.4
-
38
-
-
33845261565
-
Roles of a Trypanosoma brucei 5′->3′ exoribonuclease homolog in mRNA degradation
-
Li, C. H., Irmer, H., Gudjonsdottir-Planck, D., Freese, S., Salm, H., Haile, S., Estevez, A. M. and Clayton, C. (2006). Roles of a Trypanosoma brucei 5′->3′ exoribonuclease homolog in mRNA degradation. RNA 12, 2171-2186.
-
(2006)
RNA
, vol.12
, pp. 2171-2186
-
-
Li, C.H.1
Irmer, H.2
Gudjonsdottir-Planck, D.3
Freese, S.4
Salm, H.5
Haile, S.6
Estevez, A.M.7
Clayton, C.8
-
39
-
-
58149481225
-
ATP hydrolysis is required for DEAD-box protein recycling but not for duplex unwinding
-
Liu, F., Putnam, A. and Jankowsky, E. (2008). ATP hydrolysis is required for DEAD-box protein recycling but not for duplex unwinding. Proc. Natl. Acad. Sci. USA 105, 20209-20214.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 20209-20214
-
-
Liu, F.1
Putnam, A.2
Jankowsky, E.3
-
40
-
-
33751084623
-
Functional analysis of Trypanosoma brucei PUF1
-
Luu, V. D., Brems, S., Hoheisel, J. D., Burchmore, R., Guilbride, D. L. and Clayton, C. (2006). Functional analysis of Trypanosoma brucei PUF1. Mol. Biochem. Parasitol. 150, 340-349.
-
(2006)
Mol. Biochem. Parasitol
, vol.150
, pp. 340-349
-
-
Luu, V.D.1
Brems, S.2
Hoheisel, J.D.3
Burchmore, R.4
Guilbride, D.L.5
Clayton, C.6
-
41
-
-
0028214539
-
A common pyrimidine-rich motif governs trans-splicing and polyadenylation of tubulin polycistronic pre-mRNA in trypanosomes
-
Matthews, K. R., Tschudi, C. and Ullu, E. (1994). A common pyrimidine-rich motif governs trans-splicing and polyadenylation of tubulin polycistronic pre-mRNA in trypanosomes. Genes Dev. 8, 491-501.
-
(1994)
Genes Dev
, vol.8
, pp. 491-501
-
-
Matthews, K.R.1
Tschudi, C.2
Ullu, E.3
-
42
-
-
1542504728
-
Transformation of monomorphic and pleomorphic Trypanosoma brucei
-
McCulloch, R., Vassella, E., Burton, P., Boshart, M. and Barry, J. D. (2004). Transformation of monomorphic and pleomorphic Trypanosoma brucei. Methods Mol. Biol. 262, 53-86.
-
(2004)
Methods Mol. Biol
, vol.262
, pp. 53-86
-
-
McCulloch, R.1
Vassella, E.2
Burton, P.3
Boshart, M.4
Barry, J.D.5
-
43
-
-
0037106465
-
Identification of mRNA decapping activities and an ARE-regulated 3′ to 5′ exonuclease activity in trypanosome extracts
-
Milone, J., Wilusz, J. and Bellofatto, V. (2002). Identification of mRNA decapping activities and an ARE-regulated 3′ to 5′ exonuclease activity in trypanosome extracts. Nucleic Acids Res. 30, 4040-4050.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 4040-4050
-
-
Milone, J.1
Wilusz, J.2
Bellofatto, V.3
-
44
-
-
0035671046
-
A conserved role of a DEAD box helicase in mRNA masking
-
Minshall, N., Thom, G. and Standart, N. (2001). A conserved role of a DEAD box helicase in mRNA masking. RNA 7, 1728-1742.
-
(2001)
RNA
, vol.7
, pp. 1728-1742
-
-
Minshall, N.1
Thom, G.2
Standart, N.3
-
45
-
-
65649125183
-
Role of p54 RNA helicase activity and its C-terminal domain in translational repression, P-body localization and assembly
-
Minshall, N., Kress, M., Weil, D. and Standart, N. (2009). Role of p54 RNA helicase activity and its C-terminal domain in translational repression, P-body localization and assembly. Mol. Biol. Cell 20, 2464-2472.
-
(2009)
Mol. Biol. Cell
, vol.20
, pp. 2464-2472
-
-
Minshall, N.1
Kress, M.2
Weil, D.3
Standart, N.4
-
46
-
-
0037080834
-
The mammalian exosome mediates the efficient degradation of mRNAs that contain AU-rich elements
-
Mukherjee, D., Gao, M., O'Connor, J. P., Raijmakers, R., Pruijn, G., Lutz, C. S. and Wilusz, J. (2002). The mammalian exosome mediates the efficient degradation of mRNAs that contain AU-rich elements. EMBO J. 21, 165-174.
-
(2002)
EMBO J
, vol.21
, pp. 165-174
-
-
Mukherjee, D.1
Gao, M.2
O'Connor, J.P.3
Raijmakers, R.4
Pruijn, G.5
Lutz, C.S.6
Wilusz, J.7
-
47
-
-
0034800019
-
Me31B silences translation of oocyte-localizing RNAs through the formation of cytoplasmic RNP complex during Drosophila oogenesis
-
Nakamura, A., Amikura, R., Hanyu, K. and Kobayashi, S. (2001). Me31B silences translation of oocyte-localizing RNAs through the formation of cytoplasmic RNP complex during Drosophila oogenesis. Development 128, 3233-3242.
-
(2001)
Development
, vol.128
, pp. 3233-3242
-
-
Nakamura, A.1
Amikura, R.2
Hanyu, K.3
Kobayashi, S.4
-
48
-
-
0034794426
-
cgh-1, a conserved predicted RNA helicase required for gametogenesis and protection from physiological germline apoptosis in C. elegans
-
Navarro, R. E., Shim, E. Y., Kohara, Y., Singson, A. and Blackwell, T. K. (2001). cgh-1, a conserved predicted RNA helicase required for gametogenesis and protection from physiological germline apoptosis in C. elegans. Development 128, 3221-3232.
-
(2001)
Development
, vol.128
, pp. 3221-3232
-
-
Navarro, R.E.1
Shim, E.Y.2
Kohara, Y.3
Singson, A.4
Blackwell, T.K.5
-
49
-
-
49749135529
-
Maternal mRNAs are regulated by diverse P body-related mRNP granules during early Caenorhabditis elegans development
-
Noble, S. L., Allen, B. L., Goh, L. K., Nordick, K. and Evans, T. C. (2008). Maternal mRNAs are regulated by diverse P body-related mRNP granules during early Caenorhabditis elegans development. J. Cell Biol. 182, 559-572.
-
(2008)
J. Cell Biol
, vol.182
, pp. 559-572
-
-
Noble, S.L.1
Allen, B.L.2
Goh, L.K.3
Nordick, K.4
Evans, T.C.5
-
50
-
-
33847417585
-
P bodies and the control of mRNA translation and degradation
-
Parker, R. and Sheth, U. (2007). P bodies and the control of mRNA translation and degradation. Mol. Cell 25, 635-646.
-
(2007)
Mol. Cell
, vol.25
, pp. 635-646
-
-
Parker, R.1
Sheth, U.2
-
51
-
-
70549084861
-
Transcriptome analysis of differentiating trypanosomes reveals the existence of multiple post-transcriptional regulons
-
Queiroz, R., Benz, C., Fellenberg, K., Hoheisel, J. D. and Clayton, C. (2009). Transcriptome analysis of differentiating trypanosomes reveals the existence of multiple post-transcriptional regulons. BMC Genomics 10, 495.
-
(2009)
BMC Genomics
, vol.10
, pp. 495
-
-
Queiroz, R.1
Benz, C.2
Fellenberg, K.3
Hoheisel, J.D.4
Clayton, C.5
-
52
-
-
0036909185
-
-
Rodgers, N. D., Wang, Z. and Kiledjian, M. (2002). Regulated alpha-globin mRNA decay is a cytoplasmic event proceeding through 3′-to-5′ exosome-dependent decapping. RNA 8, 1526-1537.
-
Rodgers, N. D., Wang, Z. and Kiledjian, M. (2002). Regulated alpha-globin mRNA decay is a cytoplasmic event proceeding through 3′-to-5′ exosome-dependent decapping. RNA 8, 1526-1537.
-
-
-
-
53
-
-
58149236691
-
The exosome contains domains with specific endoribonuclease, exoribonuclease and cytoplasmic mRNA decay activities
-
Schaeffer, D., Tsanova, B., Barbas, A., Reis, F. P., Dastidar, E. G., Sanchez-Rotunno, M., Arraiano, C. M. and van Hoof, A. (2009). The exosome contains domains with specific endoribonuclease, exoribonuclease and cytoplasmic mRNA decay activities. Nat. Struct. Mol. Biol. 16, 56-62.
-
(2009)
Nat. Struct. Mol. Biol
, vol.16
, pp. 56-62
-
-
Schaeffer, D.1
Tsanova, B.2
Barbas, A.3
Reis, F.P.4
Dastidar, E.G.5
Sanchez-Rotunno, M.6
Arraiano, C.M.7
van Hoof, A.8
-
54
-
-
0038996729
-
Contributions of the procyclin 3′ untranslated region and coding region to the regulation of expression in bloodstream forms of Trypanosoma brucei
-
Schurch, N., Furger, A., Kurath, U. and Roditi, I. (1997). Contributions of the procyclin 3′ untranslated region and coding region to the regulation of expression in bloodstream forms of Trypanosoma brucei. Mol. Biochem. Parasitol. 89, 109-121.
-
(1997)
Mol. Biochem. Parasitol
, vol.89
, pp. 109-121
-
-
Schurch, N.1
Furger, A.2
Kurath, U.3
Roditi, I.4
-
55
-
-
45249090233
-
A role for Caf1 in mRNA deadenylation and decay in trypanosomes and human cells
-
Schwede, A., Ellis, L., Luther, J., Carrington, M., Stoecklin, G. and Clayton, C. (2008). A role for Caf1 in mRNA deadenylation and decay in trypanosomes and human cells. Nucleic Acids Res. 36, 3374-3388.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 3374-3388
-
-
Schwede, A.1
Ellis, L.2
Luther, J.3
Carrington, M.4
Stoecklin, G.5
Clayton, C.6
-
56
-
-
0037968357
-
Decapping and decay of messenger RNA occur in cytoplasmic processing bodies
-
Sheth, U. and Parker, R. (2003). Decapping and decay of messenger RNA occur in cytoplasmic processing bodies. Science 300, 805-808.
-
(2003)
Science
, vol.300
, pp. 805-808
-
-
Sheth, U.1
Parker, R.2
-
57
-
-
33646200678
-
ARE-mRNA degradation requires the 5′-3′ decay pathway
-
Stoecklin, G., Mayo, T. and Anderson, P. (2006). ARE-mRNA degradation requires the 5′-3′ decay pathway. EMBO Rep. 7, 72-77.
-
(2006)
EMBO Rep
, vol.7
, pp. 72-77
-
-
Stoecklin, G.1
Mayo, T.2
Anderson, P.3
-
58
-
-
0035930337
-
Targeting an mRNA for decapping: Displacement of translation factors and association of the Lsm1p-7p complex on deadenylated yeast mRNAs
-
Tharun, S. and Parker, R. (2001). Targeting an mRNA for decapping: displacement of translation factors and association of the Lsm1p-7p complex on deadenylated yeast mRNAs. Mol. Cell 8, 1075-1083.
-
(2001)
Mol. Cell
, vol.8
, pp. 1075-1083
-
-
Tharun, S.1
Parker, R.2
-
59
-
-
43749092574
-
Identification of the heptameric Lsm complex that binds U6 snRNA in Trypanosoma brucei
-
Tkacz, I. D., Cohen, S., Salmon-Divon, M. and Michaeli, S. (2008). Identification of the heptameric Lsm complex that binds U6 snRNA in Trypanosoma brucei. Mol. Biochem. Parasitol. 160, 22-31.
-
(2008)
Mol. Biochem. Parasitol
, vol.160
, pp. 22-31
-
-
Tkacz, I.D.1
Cohen, S.2
Salmon-Divon, M.3
Michaeli, S.4
-
60
-
-
0027498318
-
Temporal order of RNA-processing reactions in trypanosomes: Rapid trans splicing precedes polyadenylation of newly synthesised tubulin transcripts
-
Ullu, E., Matthews, K. R. and Tschudi, C. (1993). Temporal order of RNA-processing reactions in trypanosomes: rapid trans splicing precedes polyadenylation of newly synthesised tubulin transcripts. Mol. Cell. Biol. 13, 720-725.
-
(1993)
Mol. Cell. Biol
, vol.13
, pp. 720-725
-
-
Ullu, E.1
Matthews, K.R.2
Tschudi, C.3
-
61
-
-
33845705717
-
A family of stage-specific alanine-rich proteins on the surface of epimastigote forms of Trypanosoma brucei
-
Urwyler, S., Studer, E., Renggli, C. K. and Roditi, I. (2007). A family of stage-specific alanine-rich proteins on the surface of epimastigote forms of Trypanosoma brucei. Mol. Microbiol. 63, 218-228.
-
(2007)
Mol. Microbiol
, vol.63
, pp. 218-228
-
-
Urwyler, S.1
Studer, E.2
Renggli, C.K.3
Roditi, I.4
-
62
-
-
61449182673
-
-
Walrad, P., Paterou, A., Acosta-Serrano, A. and Matthews, K. R. (2009). Differential trypanosome surface coat regulation by a CCCH protein that co-associates with procyclin mRNA cis-elements. PLoS Pathog. 5, e1000317.
-
Walrad, P., Paterou, A., Acosta-Serrano, A. and Matthews, K. R. (2009). Differential trypanosome surface coat regulation by a CCCH protein that co-associates with procyclin mRNA cis-elements. PLoS Pathog. 5, e1000317.
-
-
-
-
63
-
-
14844341387
-
Developmentally regulated instability of the GPI-PLC mRNA is dependent on a short lived protein factor
-
Webb, H., Burns, R., Ellis, L., Kimblin, N. and Carrington, M. (2005). Developmentally regulated instability of the GPI-PLC mRNA is dependent on a short lived protein factor. Nucleic Acids Res. 33, 1503-1512.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 1503-1512
-
-
Webb, H.1
Burns, R.2
Ellis, L.3
Kimblin, N.4
Carrington, M.5
-
64
-
-
33745159015
-
Xp54 and related (DDX6-like) RNA helicases: Roles in messenger RNP assembly, translation regulation and RNA degradation
-
Weston, A. and Sommerville, J. (2006). Xp54 and related (DDX6-like) RNA helicases: roles in messenger RNP assembly, translation regulation and RNA degradation. Nucleic Acids Res. 34, 3082-3094.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 3082-3094
-
-
Weston, A.1
Sommerville, J.2
-
65
-
-
0036860235
-
Targeting of a tetracycline-inducible expression system to the transcriptionally silent minichromosomes of Trypanosoma brucei
-
Wickstead, B., Ersfeld, K. and Gull, K. (2002). Targeting of a tetracycline-inducible expression system to the transcriptionally silent minichromosomes of Trypanosoma brucei. Mol. Biochem. Parasitol. 125, 211-216.
-
(2002)
Mol. Biochem. Parasitol
, vol.125
, pp. 211-216
-
-
Wickstead, B.1
Ersfeld, K.2
Gull, K.3
-
66
-
-
0033525524
-
A tightly regulated inducible expression system for conditional gene knock-outs and dominant-negative genetics in Trypanosoma brucei
-
Wirtz, E., Leal, S., Ochatt, C. and Cross, G. A. (1999). A tightly regulated inducible expression system for conditional gene knock-outs and dominant-negative genetics in Trypanosoma brucei. Mol. Biochem. Parasitol. 99, 89-101.
-
(1999)
Mol. Biochem. Parasitol
, vol.99
, pp. 89-101
-
-
Wirtz, E.1
Leal, S.2
Ochatt, C.3
Cross, G.A.4
-
67
-
-
35348941874
-
DEAD-box proteins unwind duplexes by local strand separation
-
Yang, Q., Del Campo, M., Lambowitz, A. M. and Jankowsky, E. (2007). DEAD-box proteins unwind duplexes by local strand separation. Mol. Cell 28, 253-263.
-
(2007)
Mol. Cell
, vol.28
, pp. 253-263
-
-
Yang, Q.1
Del Campo, M.2
Lambowitz, A.M.3
Jankowsky, E.4
-
68
-
-
0026727797
-
Identification of invariant surface glycoproteins in the bloodstream stage of Trypanosoma brucei
-
Ziegelbauer, K. and Overath, P. (1992). Identification of invariant surface glycoproteins in the bloodstream stage of Trypanosoma brucei. J. Biol. Chem. 267, 10791-10796.
-
(1992)
J. Biol. Chem
, vol.267
, pp. 10791-10796
-
-
Ziegelbauer, K.1
Overath, P.2
-
69
-
-
0026739802
-
Molecular characterization of two invariant surface glycoproteins specific for the bloodstream stage of Trypanosoma brucei
-
Ziegelbauer, K., Multhaup, G. and Overath, P. (1992). Molecular characterization of two invariant surface glycoproteins specific for the bloodstream stage of Trypanosoma brucei. J. Biol. Chem. 267, 10797-10803.
-
(1992)
J. Biol. Chem
, vol.267
, pp. 10797-10803
-
-
Ziegelbauer, K.1
Multhaup, G.2
Overath, P.3
|