Converting copepod vital rates into units appropriate for biogeochemical models

Progress in Oceanography

Volumn 84, Issue 1-2, 2010, Pages 43-51

  Frangoulis, C ^a   Carlotti, F ^b,c   Eisenhauer, L ^b,c   Zervoudaki, S ^a  

^a INSTITUTE OF OCEANOGRAPHY   (Greece)

^b AIX MARSEILLE UNIVERSITY   (France)

^c CNRS   (France)

Author keywords

[No Author keywords available]

Indexed keywords

BIOGEOCHEMICAL MODELS; CHARACTERISTIC TIME; COMMON PROBLEMS; COMMUNITY IS; CONVERSION ERRORS; CONVERSION FACTOR; COPEPOD SPECIES; FOOD WEBS; MESOZOOPLANKTON; PARAMETERISATION; SCALE TRANSFER; SINGLE VARIABLE; TROPHIC LEVEL;

BIOGEOCHEMISTRY;

BIOGEOCHEMICAL CYCLE; CRUSTACEAN; FOOD WEB; PARAMETERIZATION; TROPHIC LEVEL; ZOOPLANKTON;

COPEPODA;

EID: 77049127993     PISSN: 00796611     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.pocean.2009.09.005     Document Type: Article

References (95)

1. Aksnes D.L. Natural mortality, fecundity and development time in marine planktonic copepods-implications of behaviour. Marine Ecology Progress Series 131 (1996) 315-316
2. Aksnes D.L., Miller C.B., Ohman M.D., and Wood S.N. Estimation techniques used in studies of copepod population dynamics - a review of underlying assumptions. Sarsia 82 (1997) 279-296
3. Anderson T.R. Plankton functional type modelling: running before we can walk?. Journal of Plankton Research 27 (2005) 1073-1081
4. Båmstedt U., Gifford D.J., Irigoien X., Atkinson A., and Roman M. Feeding. In: Harris R.P., Wiebe P.H., Lenz J., Skjoldal H.R., and Huntley M. (Eds). ICES Zooplankton Methodology Manual (2000), Academic Press, London 297-399
5. Berggreen U., Hansen B., and Kiørboe T. Food size spectra, ingestion and growth of the copepod Acartia tonsa during development: implications for determination of copepod production. Marine Biology 99 (1988) 341-352
6. Besiktepe S., and Dam H.G. Coupling of ingestion and defecation as a function of diet in the calanoid copepod Acartia tonsa. Marine Ecology Progress Series 229 (2002) 151-164
7. Blackford J.C., Allen J.I., and Gilbert F.J. Ecosystem dynamics at six contrasting sites: a generic modelling study. Journal of Marine Systems 52 (2004) 191-215
8. Brunet C., Davoult D., and Casotti R. Physiological reactions to a change in light regime in cultured Skeletonema costatum (Bacillariophyta): implications to estimation of phytoplankton biomass. Hydrobiologia 333 (1996) 89-94
9. Buitenhuis E., Le Quéré C., Aumont O., Beaugrand G., Bunker A., Hirst A., Ikeda T., O'Brien T., Piontkovski S., and Straile D. Biogeochemical fluxes through mesozooplankton. Global Biogeochemical Cycles 20 (2006) 10.1029/2005GB002511 GB2003
10. Buskey E.J. Energetic costs of swarming behavior for the copepod Dioithona oculata. Marine Biology 130 (1998) 425-431
11. Calbet A., and Saiz E. The ciliate-copepod link in marine ecosystems. Aquatic Microbial Ecology 38 (2005) 157-167
12. Calbet A., Carlotti F., and Gaudy R. The feeding ecology of the copepod Centropages typicus (Kroyer). Progress in Oceanography 72 (2007) 137-150
13. Caparroy P., and Carlotti F. A model of the ingestion of Acartia tonsa: effects of turbulence and consequences for the related physiological processes. Journal of Plankton Research 18 (1996) 2139-2177
14. Caparroy P., Perez M., and Carlotti F. Feeding behavior of Centropages typicus in calm and turbulent conditions. Marine Ecology Progress Series 168 (1998) 109-118
15. Carlotti, F., Poggiale, J.C., this issue. Towards methodological approaches to implement the Rhomboid strategy in zooplankton models. Progress in Oceanography.
16. Carlotti F., Rey C., Javanshir A., and Nival S. Laboratory studies on egg and faecal pellet production of Centropages typicus: effect of age, effect of temperature, individual variability. Journal of Plankton Research 19 (1997) 1143-1165
17. Carlotti F., Giske J., and Werner F. Modeling zooplankton dynamics. In: Harris R.P., Wiebe P.H., Lenz J., Skjoldal H.R., and Huntley M. (Eds). ICES Zooplankton Methodology Manual (2000), Academic Press, London 571-667
18. Checkley D.M.J., Dagg M.J., and Uye S. Feeding, excretion and egg production by individuals and populations of the marine, planktonic copepods, Acartia spp. and Centropages furcatus. Journal of Plankton Research 14 (1992) 71-96
19. Conover R.J. Transformation of organic matter. In: Kinne O. (Ed). Marine Ecology. Dynamics vol. IV (1978), J. Wiley & Sons, New York 221-499
20. Dagg M., Cowles T., Whitledge T., Smith S., Howe S., and Judkings D. Grazing and excretion by zooplankton in the Peru upwelling system during April 1977. Deep-Sea Research 27 (1980) 43-59
21. Daly K.L. Flux of particulate matter through copepods in the Northeast Water Polynya. Journal of Marine Systems 10 (1997) 319-342
22. Durbin E.G., and Campbell R.G. Re-assessment of the gut pigment method for estimating in situ zooplankton ingestion. Marine Ecology Progress Series 331 (2007) 305-307
23. Durbin E.G., Campbell R.G., Gilman S.L., and Durbin A.G. Diel feeding behavior and ingestion rate in the copepod Calanus finmarchicus in the southern Gulf of Maine during late spring. Continental Shelf Research 15 (1995) 539-570
24. Duval W.S., and Geen G.H. Diel feeding and respiration rhythms in zooplankton. Limnology and Oceanography 21 (1976) 823-829
25. Edwards A.M., and Yool A. The role of higher predation in plankton population models. Journal of Plankton Research 22 (2000) 1085-1112
26. Fasham M.J.R. Modelling the marine biota. In: Heidmann M. (Ed). The Global Carbon Cycle (1993), Springer Verlag, New York 457-504
27. Fasham M.J.R., Duclow H.W., and McKelvie S.M. A nitrogen-based model of plankton dynamics in the oceanic mixed layer. Journal of Marine Research 48 (1990) 591-669
28. Flynn K.J. Castles built on sand: dysfunctionality in plankton models and the inadequacy of dialogue between biologists and modellers. Journal of Plankton Research 27 (2005) 1205-1210
29. Flynn K.J. Reply to horizons article 'Plankton functional type modelling: running before we can walk' Anderson (2005): II. Putting trophic functionality into plankton functional types. Journal of Plankton Research 28 (2006) 873-875
30. Frangoulis C., Belkhiria S., Goffart A., and Hecq J.H. Dynamics of copepod faecal pellets in relation to a Phaeocystis dominated phytoplankton bloom: characteristics, production and flux. Journal of Plankton Research 23 (2001) 75-88
31. Frangoulis C., Christou E.D., and Hecq J.H. Comparison of marine copepod outfluxes: nature, rate, fate and role in the carbon, and nitrogen cycles. Advances in Marine Biology 47 (2005) 251-307
32. Franks P.J.S., Wroblewski J.S., and Flierl J.R. Behavior of a simple plankton model with food-level acclimatation by herbivores. Marine Biology 91 (1986) 121-129
33. Fransz H.G., Colebrook J.M., Gamble J.C., and Krause M. The zooplankton of the North Sea. Netherlands Journal of Sea Research 28 (1991) 1-52
34. Gaudy R., and Thibault-Botha D. Metabolism of Centropages species in the Mediterranean Sea and the North Atlantic Ocean. Progress in Oceanography 72 (2007) 151-163
35. Gentleman W., Leising A., Frost B., Strom S., and Murray J. Functional responses for zooplankton feeding on multiple resources: a review of assumptions and biological dynamics. Deep-Sea Research 50 (2003) 2847-2875
36. Gnaiger E. Calculation of energetic and biochemical equivalents of respiratory oxygen consumption. In: Gnaiger E., and Forstner H. (Eds). Polarographic Oxygen Sensors (1983), Springer Verlag 337-345
37. Gonzalez H.E., and Smetacek V. The possible role of the cyclopoid copepod Oithona in retarding vertical flux of zooplankton faecal material. Marine Ecology Progress Series 113 (1994) 233-246
38. Gries T., and Güde H. Estimates of the non consumptive mortality of mesozooplankton by measurement of sedimentation losses. Limnology and Oceanography 44 (1999) 459-465
39. Halsband-Lenk C., Hirche H.J., and Carlotti F. Temperature impact on reproduction and development of congener copepod populations. Journal of Experimental Marine Biology and Ecology 271 (2002) 121-153
40. Hamblin T.J. Fake!. British Medical Journal 283 (1981) 19-26
41. Hansen B., Bjørnsen P.K., and Hansen P.-J. The size ratio between planktonic predators and their prey. Limnology and Oceanography 39 (1994) 395-403
42. Harris R.P., Wiebe P.H., Lenz J., Skjoldal H.R., and Huntley M. ICES Zooplankton Methodology Manual (2000), Academic Press, London
43. Hernandez-Leon S., and Ikeda T. A global assessment of mesozooplankton respiration in the ocean. Journal of Plankton Research 27 (2005) 153-158
44. Hirst A.G., and Bunker A.J. Growth of marine planktonic copepods: Global rates and patterns in relation to chlorophyll a, temperature, and body weight. Limnology and Oceanography 48 (2003) 1988-2010
45. Hirst A.G., and Kiørboe T. Mortality of marine planktonic copepods: global rates and patterns. Marine Ecology Progress Series 230 (2002) 195-209
46. Hirst A.G., and McKinnon A.D. Does egg production represent adult female copepod growth? A call to account for body weight changes. Marine Ecology Progress Series 223 (2001) 179-199
47. Hirst A.G., Peterson W.T., and Rothery P. Errors in juvenile copepod growth rate estimates are widespread: problems with the Moult Rate method. Marine Ecology Progress Series 296 (2005) 263-279
48. Hopcroft R.R., and Roff J.C. Zooplankton growth rates: the influence of female size and resources on egg production of tropical marine copepods. Marine Biology 132 (1998) 79-86
49. Huskin I., Anadon R., Alvarez-Marques F., and Harris R.P. Ingestion, faecal pellet and egg production rates of Calanus helgolandicus feeding coccolithophorid versus non-coccolithophorid diets. Journal of Experimental Marine Biology and Ecology 248 (2000) 239-254
50. Ikeda T., Torres J.J., Hernandez-Leon S., and Geiger S.P. Measuring metabolic rate on live zooplankton. In: Harris R.P., Wiebe P.H., Lenz J., Skjoldal H.R., and Huntley M. (Eds). ICES Zooplankton Methodology Manual (2000), Academic Press, London 461-479
51. Ikeda T., Kanno Y., Ozaki K., and Shinada A. Metabolic rates of epipelagic marine copepods as a function of body mass and temperature. Marine Biology 139 (2001) 587-596
52. Kimmerer W.J., Hirst A.G., Hopcroft R.R., and McKinnon A.D. Estimating juvenile copepod growth rates: corrections, inter-comparisons and recommendations. Marine Ecology Progress Series 336 (2007) 187-202
53. Kiørboe T. Population regulation and role of mesozooplankton in shaping marine pelagic food webs. Hydrobiologia 363 (1998) 13-27
54. Kiørboe T., and Nielsen T.G. Regulation of zooplankton biomass and production in a temperate, coastal ecosystem. 1. Copepods. Limnology and Oceanography 39 (1994) 493-507
55. Lampert W. Release of dissolved organic carbon by grazing zooplankton. Limnology and Oceanography 23 (1978) 831-834
56. Le Borgne R.P. The release of soluble end products of metabolism. In: Corner E.D.S., and O'Hara S.C.M. (Eds). The Biological Chemistry of Marine Copepods (1986), Clarendon Press, Oxford 109-164
57. Lima I.D., Olson D.B., and Doney S.C. Intrinsic dynamics and stability properties of size-structured pelagic ecosystem models. Journal of Plankton Research 24 (2002) 533-556
58. Mackas D., and Bohrer D. Fluorescence analysis of zooplankton gut contents and an investigation of diel feeding patterns. Journal of Experimental Marine Biology and Ecology 25 (1976) 77-85
59. Mauchline J. The biology of calanoid copepods. Advances in Marine Biology 33 (1998) 1-710
60. Mayzaud P., and Poulet S. The importance of the time factor in the response of zooplankton to varying concentrations of naturally occurring particulate matter. Limnology and Oceanography 23 (1978) 1144-1154
61. 2 production. Limnology and Oceanography 50 (2005) 291-298
62. McKinnon A.D., and Ayukai T. Copepod egg production and food resources in Exmouth Gulf, Western Australia. Marine and Freshwater Research 47 (1996) 595-603
63. Menden-Deuer S., and Lessard E. Carbon to volume relationships for dinoflagellates, diatoms, and other protist plankton. Limnology and Oceanography 45 (2000) 569-579
64. Miller, C.A. 1992. Effects of food quality and quantity on nitrogen excretion by the copepod Acartia tonsa. Ph.D. Thesis, University of Maryland. 149pp.
65. Miller C.A., and Glibert P.M. Nitrogen excretion by the calanoid copepod Acartia tonsa: results of mesocosm experiments. Journal of Plankton Research 20 (1998) 1767-1780
66. Moloney C.L. Simulation studies of trophic flows and nutrient cycles in Benguela upwelling foodwebs. South African Journal of Marine Science 12 (1992) 457-476
67. Mullin M.M., and Brooks E.R. Growth and metabolism of two planktonic, marine copepods as influenced by temperature and type of food. In: Steele J.H. (Ed). Marine Food Chains (1970), Oliver & Boyd 74-95
68. Ohman M.D., and Wood S.N. The inevitability of mortality. ICES Journal of Marine Science 52 (1995) 517-522
69. Ohman M.D., Eiane K., Durbin E.G., Runge J.A., and Hirche H.J. A comparative study of Calanus finmarchicus mortality patterns at five localities in the North Atlantic. ICES Journal of Marine Science 61 (2004) 687-697
70. Olesen M., Strake S., and Andrushaitis A. Egestion of non-pellet-bound fecal material from the copepod Acartia tonsa: implication for vertical flux and degradation. Marine Ecology Progress Series 293 (2005) 131-142
71. Pascual M. Computational ecology: from the complex to the simple and back. PLoS Computational Biology 1 (2005) 101-105
72. Peterson D.H., and Festa J.F. Numerical simulation of phytoplankton productivity in partially mixed estuaries. Estuarine, Coastal and Shelf Science 19 (1984) 563-589
73. Peterson W.T., Tiselius P., and Kiørboe T. Copepod egg production, moulting and growth rates, and secondary production, in the Skagerrak in August 1988. Journal of Plankton Research 13 (1991) 131-154
74. Posch T., Loferer-Kroâbacher M., Gao G., Alfreider A., Pernthaler J., and Psenner R. On the precision of bacterioplankton biomass determination: a comparison of two fluorescent dyes, and of allometric and linear volume-to-carbon conversion factors. Aquatic Microbial Ecology 25 (2001) 55-63
75. Postel L., Fock H., and Hagen W. Biomass and abundance. In: Harris R.P., Wiebe P.H., Lenz J., Skjoldal H.R., and Huntley M. (Eds). ICES Zooplankton Methodology Manual (2000), Academic Press, London 83-192
76. Poulet S.A., Ianora A., Laabir M., and Klein Breteler W.C.M. Towards the measurement of secondary production and recruitment in copepods. ICES Journal of Marine Science 52 (1995) 359-368
77. Putt M., and Stoecker D.K. An experimentally determined carbon volume ratio for marine oligotrichous ciliates from estuarine and coastal waters. Limnology and Oceanography 34 (1989) 1097-1103
78. Roman M.R., Adolf H.A., Landry M.R., Madin L.P., Steinberg D.K., and Zhang X. Estimates of oceanic mesozooplankton production: a comparison using the Bermuda and Hawaii time-series data. Deep-Sea Research 49 (2002) 175-192
79. Roy S., Silverberg N., Romero N., Deibel D., Klein B., Savenkoff C., Vezina A.F., Tremblay J.E., Legendre L., and Rivkin R.B. Importance of mesozooplankton feeding for the downward flux of biogenic carbon in the Gulf of St. Lawrence (Canada). Deep-Sea Research 47 (2000) 519-544
80. Runge J.A., and Roff J.C. The measurement of growth and reproductive rates. In: Harris R.P., Wiebe P.H., Lenz J., Skjoldal H.R., and Huntley M. (Eds). ICES Zooplankton Methodology Manual (2000), Academic Press, London 401-454
81. Saiz E., and Calbet A. Scaling of feeding in marine calanoid copepods. Limnology and Oceanography 52 (2007) 668-675
82. Scheffer M. Should we expect strange attractors behind plankton dynamics and if so, should we bother?. Journal of Plankton Research 13 (1991) 1291-1305
83. Sekiguchi H., McLaren I.A., and Corkett C.J. Relationship between growth and egg production in the copepod Acartia clausi hudsonica. Marine Biology 58 (1980) 133-138
84. Slagstad D., and Tande E. A mathematical model of the assimilation process in the copepod Calanus finmarchicus (Gunnerus): computer simulations discussed in relation to experimental results. Kieler Meeresforschungen Sonderheft 5 (1981) 229-239
85. Steinberg D.K., Carlson C.A., Bates N.R., Goldthwait S.A., Madin L.P., and Michaels A.F. Zooplankton vertical migration and the active transport of dissolved organic and inorganic carbon in the Sargasso Sea. Deep-Sea Research 47 (2000) 137-158
86. Steinberg D.K., Goldthwait S.A., and Hansell D.A. Zooplankton vertical migration and the active transport of dissolved organic and inorganic nitrogen in the Sargasso Sea. Deep-Sea Research 49 (2002) 1445-1461
87. Steinberg D.K., Nelson N.B., Carlson C.A., and Prusak A.C. Production of chromophoric dissolved organic matter (CDOM) in the open ocean by zooplankton and the colonial cyanobacterium Trichodesmium spp. Marine Ecology Progress Series 267 (2004) 45-56
88. Straile D. Gross growth efficiencies of protozoan and metazoan zooplankton and their dependence on food concentration, predator-prey weight ratio, and taxonomic group. Limnology and Oceanography 42 (1997) 1375-1385
89. Strathmann R.R. Estimating the organic carbon content of phytoplankton from cell volume or plasma volume. Limnology and Oceanography 12 (1967) 411-418
90. Turner J.T. Zooplankton fecal pellets, marine snow and sinking phytoplankton blooms. Aquatic Microbial Ecology 27 (2002) 57-102
91. Urban-Rich J., Hansell D.A., and Roman M.R. Analysis of copepod fecal pellet carbon using high temperature combustion method. Marine Ecology Progress Series 171 (1998) 199-208
92. Vidal J. Physioecology of zooplankton. II. Effects of phytoplankton concentration, temperature and body size on the development and molting rates of Calanus pacificus and Pseudocalanus sp. Marine Biology 56 (1980) 135-146
93. Wheeler E.H.J. Copepod detritus in the deep sea. Limnology and Oceanography 12 (1967) 697-702
94. Yamaguchi A., Watanabe Y., Ishida H., Harimoto T., Furusawa K., Suzuki S., Ishizaka J., Ikeda T., and Takahashi M. Community and trophic structures of pelagic copepods down to greater depths in the western subarctic Pacific (WEST-COSMIC). Deep-Sea Research 49 (2002) 1007-1025
95. Zhang X., and Dam H.G. Downward export of carbon by diel migrant mesozooplankton in the central equatorial Pacific. Deep-Sea Research 44 (1997) 2191-2202