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Source Code for Biology and Medicine
Volumn 5, Issue , 2010, Pages
Dockres: A computer program that analyzes the output of virtual screening of small molecules
Author keywords

[No Author keywords available]
Indexed keywords

EID: 76949091625     PISSN: None     EISSN: 17510473     Source Type: Journal    
DOI: 10.1186/1751-0473-5-2     Document Type: Review
Times cited : (17)
References (9)
  • 1
    • 0036007208 scopus 로고    scopus 로고
    • Virtual screening and fast automated docking methods
    • Schneider G, Böhm H-J. Virtual screening and fast automated docking methods. Drug Discovery Today 2002, 7:64-70.
    • (2002) Drug Discovery Today , vol.7 , pp. 64-70
    • Schneider, G.1    Böhm, H.-.J.2
  • 2
    • 33745199815 scopus 로고    scopus 로고
    • Virtual ligand screening: strategies, perspectives and limitations
    • 10.1016/j.drudis.2006.05.012, 16793526
    • Klebe G. Virtual ligand screening: strategies, perspectives and limitations. Drug Discovery Today 2006, 11:580-594. 10.1016/j.drudis.2006.05.012, 16793526.
    • (2006) Drug Discovery Today , vol.11 , pp. 580-594
    • Klebe, G.1
  • 3
    • 41349106585 scopus 로고    scopus 로고
    • Evaluation of the performance of 3D virtual screening protocols: RMSD comparisons, enrichment assessments, and decoy selection--What can we learn from earlier mistakes?
    • 10.1007/s10822-007-9163-6, 18196462
    • Kirchmair J, Markt P, Distinto S, Wolber G, Langer T. Evaluation of the performance of 3D virtual screening protocols: RMSD comparisons, enrichment assessments, and decoy selection--What can we learn from earlier mistakes?. J Comput Aided Mol Des 2008, 22:213-228. 10.1007/s10822-007-9163-6, 18196462.
    • (2008) J Comput Aided Mol Des , vol.22 , pp. 213-228
    • Kirchmair, J.1    Markt, P.2    Distinto, S.3    Wolber, G.4    Langer, T.5
  • 5
    • 34248358986 scopus 로고    scopus 로고
    • Role of binding entropy in the refinement of protein-ligand docking predictions: analysis based on the use of 11 scoring functions
    • 10.1002/jcc.20580, 17342720
    • Ruvinsky AM. Role of binding entropy in the refinement of protein-ligand docking predictions: analysis based on the use of 11 scoring functions. J Comput Chem 2007, 28:1364-1372. 10.1002/jcc.20580, 17342720.
    • (2007) J Comput Chem , vol.28 , pp. 1364-1372
    • Ruvinsky, A.M.1
  • 6
    • 84864289379 scopus 로고    scopus 로고
    • Computer aided identification of small molecules disrupting uPAR/a5B1 - integrin interaction; a new paradigm for metastasis prevention
    • Chaurasia P, Mezei M, Zhou M-M, Ossowski L. Computer aided identification of small molecules disrupting uPAR/a5B1 - integrin interaction; a new paradigm for metastasis prevention. PloS ONE 2009, 5(9):1487-1499.
    • (2009) PloS ONE , vol.5 , Issue.9 , pp. 1487-1499
    • Chaurasia, P.1    Mezei, M.2    Zhou, M.-.M.3    Ossowski, L.4
  • 7
    • 45749124056 scopus 로고    scopus 로고
    • Homology modeling and site-directed mutagenesis to identify selective inhibitors of endothelin-converting enzyme-2
    • 10.1021/jm7015478, 2706147, 18507370
    • Gagnidze K, Sachchidanand, Rozenfeld R, Mezei M, Zhou M-M, Devi LA. Homology modeling and site-directed mutagenesis to identify selective inhibitors of endothelin-converting enzyme-2. J Med Chem 2008, 51:3378-3387. 10.1021/jm7015478, 2706147, 18507370.
    • (2008) J Med Chem , vol.51 , pp. 3378-3387
    • Gagnidze, K.1    Sachchidanand2    Rozenfeld, R.3    Mezei, M.4    Zhou, M.-.M.5    Devi, L.A.6
  • 8
    • 13844312649 scopus 로고    scopus 로고
    • ZINC - A Free Database of Commercially Available Compounds for Virtual Screening
    • 10.1021/ci049714+, 1360656, 15667143
    • Irwin JJ, Shoichet BK. ZINC - A Free Database of Commercially Available Compounds for Virtual Screening. J Chem Inf Model 2005, 45:177-182. 10.1021/ci049714+, 1360656, 15667143.
    • (2005) J Chem Inf Model , vol.45 , pp. 177-182
    • Irwin, J.J.1    Shoichet, B.K.2

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.