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Volumn 5, Issue 1, 2010, Pages

Efficient algorithms for analyzing segmental duplications with deletions and inversions in genomes

Author keywords

[No Author keywords available]

Indexed keywords

MAMMALIA;

EID: 76749147895     PISSN: None     EISSN: 17487188     Source Type: Journal    
DOI: 10.1186/1748-7188-5-11     Document Type: Article
Times cited : (4)

References (18)
  • 1
    • 0026680446 scopus 로고
    • Gene Order Comparisons for Phylogenetic Inference: Evolution of the Mitochondrial Genome
    • 10.1073/pnas.89.14.6575, 49544, 1631158
    • Sankoff D, Leduc G, Antoine N, Paquin B, Lang B, Cedergren R. Gene Order Comparisons for Phylogenetic Inference: Evolution of the Mitochondrial Genome. Proc Natl Acad Sci USA 1992, 89(14):6575-6579. 10.1073/pnas.89.14.6575, 49544, 1631158.
    • (1992) Proc Natl Acad Sci USA , vol.89 , Issue.14 , pp. 6575-6579
    • Sankoff, D.1    Leduc, G.2    Antoine, N.3    Paquin, B.4    Lang, B.5    Cedergren, R.6
  • 4
    • 4544242008 scopus 로고    scopus 로고
    • Genomic Distances Under Deletions and Insertions
    • Marron M, Swenson KM, Moret BME. Genomic Distances Under Deletions and Insertions. TCS 2004, 325(3):347-360.
    • (2004) TCS , vol.325 , Issue.3 , pp. 347-360
    • Marron, M.1    Swenson, K.M.2    Moret, B.M.E.3
  • 5
    • 84937391540 scopus 로고    scopus 로고
    • Genome Rearrangement by Reversals and Insertions/Deletions of Contiguous Segments
    • Berlin: Springer-Verlag
    • El-Mabrouk N. Genome Rearrangement by Reversals and Insertions/Deletions of Contiguous Segments. Proc 11th Ann Symp Combin Pattern Matching (CPM00) 2000, 1848:222-234. Berlin: Springer-Verlag.
    • (2000) Proc 11th Ann Symp Combin Pattern Matching (CPM00) , vol.1848 , pp. 222-234
    • El-Mabrouk, N.1
  • 8
    • 52449109767 scopus 로고    scopus 로고
    • Inferring Ancestral Gene Orders for a Family of Tandemly Arrayed Genes
    • Bertrand D, Lajoie M, El-Mabrouk N. Inferring Ancestral Gene Orders for a Family of Tandemly Arrayed Genes. J Comp Biol 2008, 15(8):1063-1077.
    • (2008) J Comp Biol , vol.15 , Issue.8 , pp. 1063-1077
    • Bertrand, D.1    Lajoie, M.2    El-Mabrouk, N.3
  • 10
    • 0036187352 scopus 로고    scopus 로고
    • Reconstructing the Duplication History of Tandemly Repeated Genes
    • Elemento O, Gascuel O, Lefranc MP. Reconstructing the Duplication History of Tandemly Repeated Genes. Mol Biol Evol 2002, 19(3):278-288.
    • (2002) Mol Biol Evol , vol.19 , Issue.3 , pp. 278-288
    • Elemento, O.1    Gascuel, O.2    Lefranc, M.P.3
  • 11
    • 34250324321 scopus 로고    scopus 로고
    • Duplication and Inversion History of a Tandemly Repeated Genes Family
    • Lajoie M, Bertrand D, El-Mabrouk N, Gascuel O. Duplication and Inversion History of a Tandemly Repeated Genes Family. J Comp Bio 2007, 14(4):462-478.
    • (2007) J Comp Bio , vol.14 , Issue.4 , pp. 462-478
    • Lajoie, M.1    Bertrand, D.2    El-Mabrouk, N.3    Gascuel, O.4
  • 12
    • 0037623969 scopus 로고    scopus 로고
    • The Reconstruction of Doubled Genomes
    • El-Mabrouk N, Sankoff D. The Reconstruction of Doubled Genomes. SIAM J Comput 2003, 32(3):754-792.
    • (2003) SIAM J Comput , vol.32 , Issue.3 , pp. 754-792
    • El-Mabrouk, N.1    Sankoff, D.2
  • 13
    • 33847709186 scopus 로고    scopus 로고
    • Whole Genome Duplications and Contracted Breakpoint Graphs
    • Alekseyev MA, Pevzner PA. Whole Genome Duplications and Contracted Breakpoint Graphs. SICOMP 2007, 36(6):1748-1763.
    • (2007) SICOMP , vol.36 , Issue.6 , pp. 1748-1763
    • Alekseyev, M.A.1    Pevzner, P.A.2
  • 14
    • 33745373606 scopus 로고    scopus 로고
    • Primate Segmental Duplications: Crucibles of Evolution, Diversity and Disease
    • 10.1038/nrg1895, 16770338
    • Bailey J, Eichler E. Primate Segmental Duplications: Crucibles of Evolution, Diversity and Disease. Nat Rev Genet 2006, 7:552-564. 10.1038/nrg1895, 16770338.
    • (2006) Nat Rev Genet , vol.7 , pp. 552-564
    • Bailey, J.1    Eichler, E.2
  • 15
    • 35649007348 scopus 로고    scopus 로고
    • Ancestral reconstruction of segmental duplications reveals punctuated cores of human genome evolution
    • 10.1038/ng.2007.9, 17922013
    • Jiang Z, Tang H, Ventura M, Cardone MF, Marques-Bonet T, She X, Pevzner PA, Eichler EE. Ancestral reconstruction of segmental duplications reveals punctuated cores of human genome evolution. Nature Genetics 2007, 39:1361-1368. 10.1038/ng.2007.9, 17922013.
    • (2007) Nature Genetics , vol.39 , pp. 1361-1368
    • Jiang, Z.1    Tang, H.2    Ventura, M.3    Cardone, M.F.4    Marques-Bonet, T.5    She, X.6    Pevzner, P.A.7    Eichler, E.E.8
  • 16
    • 33845194247 scopus 로고    scopus 로고
    • Recurrent duplication-driven transposition of DNA during hominoid evolution
    • 10.1073/pnas.0605426103, 1693797, 17101969
    • Johnson M, Cheng Z, Morrison V, Scherer S, Ventura M, Gibbs R, Green E, Eichler E. Recurrent duplication-driven transposition of DNA during hominoid evolution. Proc Natl Acad Sci USA 2006, 103:17626-17631. 10.1073/pnas.0605426103, 1693797, 17101969.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 17626-17631
    • Johnson, M.1    Cheng, Z.2    Morrison, V.3    Scherer, S.4    Ventura, M.5    Gibbs, R.6    Green, E.7    Eichler, E.8
  • 17
    • 49549096702 scopus 로고    scopus 로고
    • Analysis of Segmental Duplications via Duplication Distance
    • 10.1093/bioinformatics/btn292, 18689814
    • Kahn CL, Raphael BJ. Analysis of Segmental Duplications via Duplication Distance. Bioinformatics 2008, 24:i133-138. 10.1093/bioinformatics/btn292, 18689814.
    • (2008) Bioinformatics , vol.24
    • Kahn, C.L.1    Raphael, B.J.2
  • 18
    • 61949248723 scopus 로고    scopus 로고
    • A Parsimony Approach to Analysis of Human Segmental Duplications
    • Kahn CL, Raphael BJ. A Parsimony Approach to Analysis of Human Segmental Duplications. Pacific Symposium on Biocomputing 2009, 126-137.
    • (2009) Pacific Symposium on Biocomputing , pp. 126-137
    • Kahn, C.L.1    Raphael, B.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.